RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 GDPD3Q7L5L3 318 aa9.89□□□□□ -0.83
SKA2-204ENST00000578519 GPR137CQ8N3F9 429 aa9.89□□□□□ -0.83
SKA2-204ENST00000578519 PRSS35Q8N3Z0 413 aa9.89□□□□□ -0.83
SKA2-204ENST00000578519 GALNT16Q8N428 558 aa9.89□□□□□ -0.83
SKA2-204ENST00000578519 NKAIN3Q8N8D7 197 aa9.89□□□□□ -0.83
SKA2-204ENST00000578519 TMEM178AQ8NBL3 297 aa9.89□□□□□ -0.83
SKA2-204ENST00000578519 OR13C3Q8NGS6 347 aa9.89□□□□□ -0.83
SKA2-204ENST00000578519 FOXN4Q96NZ1 517 aa9.89□□□□□ -0.83
SKA2-204ENST00000578519 OR2M2Q96R28 347 aa9.89□□□□□ -0.83
SKA2-204ENST00000578519 THAP7Q9BT49 309 aaPredicted RBP9.89□□□□□ -0.83
SKA2-204ENST00000578519 ULBP2Q9BZM5 246 aa9.89□□□□□ -0.83
SKA2-204ENST00000578519 NELFAQ9H3P2 528 aa9.89□□□□□ -0.83
SKA2-204ENST00000578519 NEK6Q9HC98 313 aa9.89□□□□□ -0.83
SKA2-204ENST00000578519 PARD6AQ9NPB6 346 aa9.89□□□□□ -0.83
SKA2-204ENST00000578519 DIABLOQ9NR28 239 aa9.89□□□□□ -0.83
SKA2-204ENST00000578519 POLE4Q9NR33 117 aa9.89□□□□□ -0.83
SKA2-204ENST00000578519 SLC17A5Q9NRA2 495 aa9.89□□□□□ -0.83
SKA2-204ENST00000578519 EMC3Q9P0I2 261 aa9.89□□□□□ -0.83
SKA2-204ENST00000578519 GDF2Q9UK05 429 aaPredicted RBP9.89□□□□□ -0.83
SKA2-204ENST00000578519 EMC9Q9Y3B6 208 aa9.89□□□□□ -0.83
SKA2-204ENST00000578519 FAM240BA0A1B0GVZ2 78 aa9.88□□□□□ -0.83
SKA2-204ENST00000578519 PMS2P1A4D2B8 440 aa9.88□□□□□ -0.83
SKA2-204ENST00000578519 LRRC3CA6NJW4 275 aa9.88□□□□□ -0.83
SKA2-204ENST00000578519 CDRT15L2A8MXV6 281 aa9.88□□□□□ -0.83
SKA2-204ENST00000578519 PIN1P1O15428 100 aa9.88□□□□□ -0.83
SKA2-204ENST00000578519 MPZL1O95297 269 aa9.88□□□□□ -0.83
SKA2-204ENST00000578519 WDPCPO95876 746 aa9.88□□□□□ -0.83
SKA2-204ENST00000578519 ACTL6AO96019 429 aa9.88□□□□□ -0.83
SKA2-204ENST00000578519 SP1P08047 785 aa9.88□□□□□ -0.83
SKA2-204ENST00000578519 CEACAM1P13688 526 aa9.88□□□□□ -0.83
SKA2-204ENST00000578519 SNRPBP14678 240 aaKnown RBP9.88□□□□□ -0.83
SKA2-204ENST00000578519 ATF1P18846 271 aa9.88□□□□□ -0.83
SKA2-204ENST00000578519 RPS27P42677 84 aaKnown RBP9.88□□□□□ -0.83
SKA2-204ENST00000578519 EIF1AXP47813 144 aaKnown RBP9.88□□□□□ -0.83
SKA2-204ENST00000578519 MMP15P51511 669 aa9.88□□□□□ -0.83
SKA2-204ENST00000578519 PCBD1P61457 104 aa9.88□□□□□ -0.83
SKA2-204ENST00000578519 FOXK1P85037 733 aa9.88□□□□□ -0.83
SKA2-204ENST00000578519 ECH1Q13011 328 aa9.88□□□□□ -0.83
SKA2-204ENST00000578519 STK11Q15831 433 aa9.88□□□□□ -0.83
SKA2-204ENST00000578519 FAM189A2Q15884 450 aa9.88□□□□□ -0.83
SKA2-204ENST00000578519 RAB11BQ15907 218 aa9.88□□□□□ -0.83
SKA2-204ENST00000578519 WIPI1Q5MNZ9 446 aaPredicted RBP9.88□□□□□ -0.83
SKA2-204ENST00000578519 SPINK14Q6IE38 97 aa9.88□□□□□ -0.83
SKA2-204ENST00000578519 FOXL2NBQ6ZUU3 175 aa9.88□□□□□ -0.83
SKA2-204ENST00000578519 SPATC1Q76KD6 591 aa9.88□□□□□ -0.83
SKA2-204ENST00000578519 AAED1Q7RTV5 226 aa9.88□□□□□ -0.83
SKA2-204ENST00000578519 DTX1Q86Y01 620 aa9.88□□□□□ -0.83
SKA2-204ENST00000578519 LINC00346Q8IVM7 164 aa9.88□□□□□ -0.83
SKA2-204ENST00000578519 SERPINA12Q8IW75 414 aa9.88□□□□□ -0.83
SKA2-204ENST00000578519 C20orf196Q8IYI0 205 aa9.88□□□□□ -0.83
SKA2-204ENST00000578519 ELMOD2Q8IZ81 293 aa9.88□□□□□ -0.83
SKA2-204ENST00000578519 OR4M1Q8NGD0 313 aa9.88□□□□□ -0.83
SKA2-204ENST00000578519 OR5D14Q8NGL3 314 aa9.88□□□□□ -0.83
SKA2-204ENST00000578519 RGP1Q92546 391 aaPredicted RBP9.88□□□□□ -0.83
SKA2-204ENST00000578519 SPTSSAQ969W0 71 aa9.88□□□□□ -0.83
SKA2-204ENST00000578519 ZC3HAV1LQ96H79 300 aaKnown RBP9.88□□□□□ -0.83
SKA2-204ENST00000578519 AMELYQ99218 206 aa9.88□□□□□ -0.83
SKA2-204ENST00000578519 ABCG5Q9H222 651 aa9.88□□□□□ -0.83
SKA2-204ENST00000578519 RBFOX1Q9NWB1 397 aaKnown RBP9.88□□□□□ -0.83
SKA2-204ENST00000578519 RHBDL2Q9NX52 303 aa9.88□□□□□ -0.83
SKA2-204ENST00000578519 ING1Q9UK53 422 aaPredicted RBP9.88□□□□□ -0.83
SKA2-204ENST00000578519 MCTS1Q9ULC4 181 aaKnown RBP9.88□□□□□ -0.83
SKA2-204ENST00000578519 DVL2O14641 736 aa9.87□□□□□ -0.83
SKA2-204ENST00000578519 LYRM1O43325 122 aa9.87□□□□□ -0.83
SKA2-204ENST00000578519 SYT7O43581 403 aa9.87□□□□□ -0.83
SKA2-204ENST00000578519 GSTZ1O43708 216 aaPredicted RBP9.87□□□□□ -0.83
SKA2-204ENST00000578519 CXCL13O43927 109 aa9.87□□□□□ -0.83
SKA2-204ENST00000578519 NEURL1O76050 574 aa9.87□□□□□ -0.83
SKA2-204ENST00000578519 MAS1P04201 325 aa9.87□□□□□ -0.83
SKA2-204ENST00000578519 EIF4EP06730 217 aaKnown RBP9.87□□□□□ -0.83
SKA2-204ENST00000578519 ZNF20P17024 532 aa9.87□□□□□ -0.83
SKA2-204ENST00000578519 CTSSP25774 331 aa9.87□□□□□ -0.83
SKA2-204ENST00000578519 CFPP27918 469 aa9.87□□□□□ -0.83
SKA2-204ENST00000578519 MNDAP41218 407 aa9.87□□□□□ -0.83
SKA2-204ENST00000578519 NBL1P41271 181 aa9.87□□□□□ -0.83
SKA2-204ENST00000578519 PSMA6P60900 246 aaKnown RBP9.87□□□□□ -0.83
SKA2-204ENST00000578519 MRPS34P82930 218 aaKnown RBP9.87□□□□□ -0.83
SKA2-204ENST00000578519 FOXO1Q12778 655 aa9.87□□□□□ -0.83
SKA2-204ENST00000578519 MFAP5Q13361 173 aa9.87□□□□□ -0.83
SKA2-204ENST00000578519 SLC10A1Q14973 349 aa9.87□□□□□ -0.83
SKA2-204ENST00000578519 HYAL4Q2M3T9 481 aa9.87□□□□□ -0.83
SKA2-204ENST00000578519 HES5Q5TA89 166 aa9.87□□□□□ -0.83
SKA2-204ENST00000578519 RIPPLY2Q5TAB7 128 aa9.87□□□□□ -0.83
SKA2-204ENST00000578519 LINC00696Q6ZRV3 163 aa9.87□□□□□ -0.83
SKA2-204ENST00000578519 PGAP1Q75T13 922 aa9.87□□□□□ -0.83
SKA2-204ENST00000578519 FCRLAQ7L513 359 aa9.87□□□□□ -0.83
SKA2-204ENST00000578519 SYT9Q86SS6 491 aa9.87□□□□□ -0.83
SKA2-204ENST00000578519 LRRTM1Q86UE6 522 aa9.87□□□□□ -0.83
SKA2-204ENST00000578519 NR2C2APQ86WQ0 139 aa9.87□□□□□ -0.83
SKA2-204ENST00000578519 SULF2Q8IWU5 870 aa9.87□□□□□ -0.83
SKA2-204ENST00000578519 CDH26Q8IXH8 852 aa9.87□□□□□ -0.83
SKA2-204ENST00000578519 ZNF283Q8N7M2 679 aa9.87□□□□□ -0.83
SKA2-204ENST00000578519 IL17RDQ8NFM7 739 aa9.87□□□□□ -0.83
SKA2-204ENST00000578519 OR10D3Q8NH80 312 aa9.87□□□□□ -0.83
SKA2-204ENST00000578519 CPT1CQ8TCG5 803 aa9.87□□□□□ -0.83
SKA2-204ENST00000578519 CHAC2Q8WUX2 184 aa9.87□□□□□ -0.83
SKA2-204ENST00000578519 SNRNP27Q8WVK2 155 aaKnown RBP9.87□□□□□ -0.83
SKA2-204ENST00000578519 ASB5Q8WWX0 329 aa9.87□□□□□ -0.83
SKA2-204ENST00000578519 DEDD2Q8WXF8 326 aa9.87□□□□□ -0.83
SKA2-204ENST00000578519 HSD17B8Q92506 261 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms