RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 GYPBP06028 91 aa7.03□□□□□ -1.28
COPS3-215ENST00000578317 OR2T7P0C7T2 308 aa7.03□□□□□ -1.28
COPS3-215ENST00000578317 GAAP10253 952 aa7.03□□□□□ -1.28
COPS3-215ENST00000578317 PF4V1P10720 104 aa7.03□□□□□ -1.28
COPS3-215ENST00000578317 PYCR1P32322 319 aa7.03□□□□□ -1.28
COPS3-215ENST00000578317 ZNF84P51523 738 aa7.03□□□□□ -1.28
COPS3-215ENST00000578317 RPS7P62081 194 aaKnown RBP7.03□□□□□ -1.28
COPS3-215ENST00000578317 ROR2Q01974 943 aaKnown RBP7.03□□□□□ -1.28
COPS3-215ENST00000578317 FMODQ06828 376 aa7.03□□□□□ -1.28
COPS3-215ENST00000578317 ST3GAL4Q11206 333 aa7.03□□□□□ -1.28
COPS3-215ENST00000578317 P2RY6Q15077 328 aa7.03□□□□□ -1.28
COPS3-215ENST00000578317 SOWAHCQ53LP3 525 aaPredicted RBP7.03□□□□□ -1.28
COPS3-215ENST00000578317 C1QTNF12Q5T7M4 302 aa7.03□□□□□ -1.28
COPS3-215ENST00000578317 FAM27BQ5VT28 67 aa7.03□□□□□ -1.28
COPS3-215ENST00000578317 MTFR2Q6P444 385 aa7.03□□□□□ -1.28
COPS3-215ENST00000578317 VWA1Q6PCB0 445 aa7.03□□□□□ -1.28
COPS3-215ENST00000578317 RHOUQ7L0Q8 258 aa7.03□□□□□ -1.28
COPS3-215ENST00000578317 LINGO2Q7L985 606 aa7.03□□□□□ -1.28
COPS3-215ENST00000578317 SLC16A9Q7RTY1 509 aa7.03□□□□□ -1.28
COPS3-215ENST00000578317 GABRG1Q8N1C3 465 aa7.03□□□□□ -1.28
COPS3-215ENST00000578317 CNEP1R1Q8N9A8 125 aa7.03□□□□□ -1.28
COPS3-215ENST00000578317 ZNF540Q8NDQ6 660 aa7.03□□□□□ -1.28
COPS3-215ENST00000578317 OR51L1Q8NGJ5 315 aa7.03□□□□□ -1.28
COPS3-215ENST00000578317 OR2T27Q8NH04 317 aa7.03□□□□□ -1.28
COPS3-215ENST00000578317 MYDGFQ969H8 173 aa7.03□□□□□ -1.28
COPS3-215ENST00000578317 LGALS12Q96DT0 336 aa7.03□□□□□ -1.28
COPS3-215ENST00000578317 RBM24Q9BX46 236 aaKnown RBP7.03□□□□□ -1.28
COPS3-215ENST00000578317 YIPF3Q9GZM5 350 aa7.03□□□□□ -1.28
COPS3-215ENST00000578317 ADGRL4Q9HBW9 690 aa7.03□□□□□ -1.28
COPS3-215ENST00000578317 INPP5EQ9NRR6 644 aa7.03□□□□□ -1.28
COPS3-215ENST00000578317 MRPL22Q9NWU5 206 aaKnown RBP7.03□□□□□ -1.28
COPS3-215ENST00000578317 JKAMPQ9P055 326 aa7.03□□□□□ -1.28
COPS3-215ENST00000578317 Q9UFV3 132 aa7.03□□□□□ -1.28
COPS3-215ENST00000578317 PROCRQ9UNN8 238 aa7.03□□□□□ -1.28
COPS3-215ENST00000578317 NBASA2RRP1 2371 aa7.03□□□□□ -1.28
COPS3-215ENST00000578317 MPDZO75970 2070 aa7.03□□□□□ -1.28
COPS3-215ENST00000578317 MAGEA13PA6NCF6 341 aa7.02□□□□□ -1.29
COPS3-215ENST00000578317 FAM171A2A8MVW0 826 aa7.02□□□□□ -1.29
COPS3-215ENST00000578317 ZNF99A8MXY4 864 aaPredicted RBP7.02□□□□□ -1.29
COPS3-215ENST00000578317 PTGES3LE9PB15 166 aa7.02□□□□□ -1.29
COPS3-215ENST00000578317 CCL21O00585 134 aa7.02□□□□□ -1.29
COPS3-215ENST00000578317 DVL2O14641 736 aa7.02□□□□□ -1.29
COPS3-215ENST00000578317 FAM20BO75063 409 aa7.02□□□□□ -1.29
COPS3-215ENST00000578317 CDK1P06493 297 aa7.02□□□□□ -1.29
COPS3-215ENST00000578317 LYNP07948 512 aa7.02□□□□□ -1.29
COPS3-215ENST00000578317 COX5AP20674 150 aa7.02□□□□□ -1.29
COPS3-215ENST00000578317 ATP6V1E1P36543 226 aa7.02□□□□□ -1.29
COPS3-215ENST00000578317 NUDT6P53370 316 aa7.02□□□□□ -1.29
COPS3-215ENST00000578317 SCAND1P57086 179 aa7.02□□□□□ -1.29
COPS3-215ENST00000578317 TGFBR3Q03167 851 aa7.02□□□□□ -1.29
COPS3-215ENST00000578317 MRPL49Q13405 166 aaKnown RBP7.02□□□□□ -1.29
COPS3-215ENST00000578317 CEACAM16Q2WEN9 425 aa7.02□□□□□ -1.29
COPS3-215ENST00000578317 B3GLCTQ6Y288 498 aa7.02□□□□□ -1.29
COPS3-215ENST00000578317 SHFQ7M4L6 423 aa7.02□□□□□ -1.29
COPS3-215ENST00000578317 PRSS48Q7RTY5 328 aa7.02□□□□□ -1.29
COPS3-215ENST00000578317 CCDC36Q8IYA8 594 aa7.02□□□□□ -1.29
COPS3-215ENST00000578317 UBE2J2Q8N2K1 259 aa7.02□□□□□ -1.29
COPS3-215ENST00000578317 ACBD7Q8N6N7 88 aa7.02□□□□□ -1.29
COPS3-215ENST00000578317 OR52I1Q8NGK6 324 aa7.02□□□□□ -1.29
COPS3-215ENST00000578317 OR6K6Q8NGW6 343 aa7.02□□□□□ -1.29
COPS3-215ENST00000578317 C11orf40Q8WZ69 217 aa7.02□□□□□ -1.29
COPS3-215ENST00000578317 NSMAFQ92636 917 aa7.02□□□□□ -1.29
COPS3-215ENST00000578317 NABP1Q96AH0 204 aa7.02□□□□□ -1.29
COPS3-215ENST00000578317 ZMYND19Q96E35 227 aaPredicted RBP7.02□□□□□ -1.29
COPS3-215ENST00000578317 TMEM80Q96HE8 168 aa7.02□□□□□ -1.29
COPS3-215ENST00000578317 MYCBPQ99417 103 aaPredicted RBP7.02□□□□□ -1.29
COPS3-215ENST00000578317 CNN2Q99439 309 aaKnown RBP7.02□□□□□ -1.29
COPS3-215ENST00000578317 FOXB1Q99853 325 aa7.02□□□□□ -1.29
COPS3-215ENST00000578317 ZNF649Q9BS31 505 aa7.02□□□□□ -1.29
COPS3-215ENST00000578317 COPS4Q9BT78 406 aa7.02□□□□□ -1.29
COPS3-215ENST00000578317 CDCA4Q9BXL8 241 aa7.02□□□□□ -1.29
COPS3-215ENST00000578317 HDHD5Q9BXW7 423 aa7.02□□□□□ -1.29
COPS3-215ENST00000578317 NELFAQ9H3P2 528 aa7.02□□□□□ -1.29
COPS3-215ENST00000578317 RERGLQ9H628 205 aa7.02□□□□□ -1.29
COPS3-215ENST00000578317 POLE4Q9NR33 117 aa7.02□□□□□ -1.29
COPS3-215ENST00000578317 TMEM38BQ9NVV0 291 aa7.02□□□□□ -1.29
COPS3-215ENST00000578317 PAK1IP1Q9NWT1 392 aaPredicted RBP7.02□□□□□ -1.29
COPS3-215ENST00000578317 TAS2R16Q9NYV7 291 aa7.02□□□□□ -1.29
COPS3-215ENST00000578317 CYB5R1Q9UHQ9 305 aa7.02□□□□□ -1.29
COPS3-215ENST00000578317 PRSS50Q9UI38 385 aa7.02□□□□□ -1.29
COPS3-215ENST00000578317 DIMT1Q9UNQ2 313 aaKnown RBP7.02□□□□□ -1.29
COPS3-215ENST00000578317 TMEM14AQ9Y6G1 99 aa7.02□□□□□ -1.29
COPS3-215ENST00000578317 TRIM64CA6NLI5 447 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 ZNF593O00488 134 aaPredicted RBP7.01□□□□□ -1.29
COPS3-215ENST00000578317 MPZL1O95297 269 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 IGHV3-9P01782 118 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 CST2P09228 141 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 OR8G3PP0DMU2 310 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 FOSL1P15407 271 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 ZNF823P16415 610 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 ALOX5APP20292 161 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 MSR1P21757 451 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 C21orf33P30042 268 aaPredicted RBP7.01□□□□□ -1.29
COPS3-215ENST00000578317 ENTPD1P49961 510 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 ACTC1P68032 377 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 ACTA1P68133 377 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 TUBA4AP68366 448 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 SIRPAP78324 504 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 DBPQ10586 325 aaPredicted RBP7.01□□□□□ -1.29
COPS3-215ENST00000578317 ANKRD16Q6P6B7 361 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms