RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 RNF13O43567 381 aa5.31□□□□□ -1.56
NUP88-212ENST00000576708 CHP2O43745 196 aa5.31□□□□□ -1.56
NUP88-212ENST00000576708 SHOX2O60902 331 aaPredicted RBP5.31□□□□□ -1.56
NUP88-212ENST00000576708 ERLIN1O75477 346 aa5.31□□□□□ -1.56
NUP88-212ENST00000576708 UBL3O95164 117 aa5.31□□□□□ -1.56
NUP88-212ENST00000576708 OR6A2O95222 327 aa5.31□□□□□ -1.56
NUP88-212ENST00000576708 VENTXO95231 258 aa5.31□□□□□ -1.56
NUP88-212ENST00000576708 QDPRP09417 244 aa5.31□□□□□ -1.56
NUP88-212ENST00000576708 UMPSP11172 480 aa5.31□□□□□ -1.56
NUP88-212ENST00000576708 ITGA2P17301 1181 aa5.31□□□□□ -1.56
NUP88-212ENST00000576708 FUT1P19526 365 aa5.31□□□□□ -1.56
NUP88-212ENST00000576708 RBMXP38159 391 aaKnown RBP5.31□□□□□ -1.56
NUP88-212ENST00000576708 MAGEB1P43366 347 aa5.31□□□□□ -1.56
NUP88-212ENST00000576708 GPR6P46095 362 aaPredicted RBP5.31□□□□□ -1.56
NUP88-212ENST00000576708 ATP4BP51164 291 aa5.31□□□□□ -1.56
NUP88-212ENST00000576708 CLRN1P58418 232 aa5.31□□□□□ -1.56
NUP88-212ENST00000576708 GALK2Q01415 458 aa5.31□□□□□ -1.56
NUP88-212ENST00000576708 GLO1Q04760 184 aa5.31□□□□□ -1.56
NUP88-212ENST00000576708 ZP4Q12836 540 aa5.31□□□□□ -1.56
NUP88-212ENST00000576708 SF3A3Q12874 501 aaKnown RBP eCLIP5.31□□□□□ -1.56
NUP88-212ENST00000576708 SPATS1Q496A3 300 aa5.31□□□□□ -1.56
NUP88-212ENST00000576708 AVPI1Q5T686 147 aa5.31□□□□□ -1.56
NUP88-212ENST00000576708 ZNF529Q6P280 563 aa5.31□□□□□ -1.56
NUP88-212ENST00000576708 ZNF613Q6PF04 617 aa5.31□□□□□ -1.56
NUP88-212ENST00000576708 TTC33Q6PID6 262 aaPredicted RBP5.31□□□□□ -1.56
NUP88-212ENST00000576708 DOK3Q7L591 496 aa5.31□□□□□ -1.56
NUP88-212ENST00000576708 ZNF627Q7L945 461 aa5.31□□□□□ -1.56
NUP88-212ENST00000576708 NKAIN4Q8IVV8 208 aa5.31□□□□□ -1.56
NUP88-212ENST00000576708 SLC22A24Q8N4F4 322 aa5.31□□□□□ -1.56
NUP88-212ENST00000576708 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.31□□□□□ -1.56
NUP88-212ENST00000576708 SYT14Q8NB59 555 aa5.31□□□□□ -1.56
NUP88-212ENST00000576708 C11orf65Q8NCR3 313 aa5.31□□□□□ -1.56
NUP88-212ENST00000576708 OR4K5Q8NGD3 323 aa5.31□□□□□ -1.56
NUP88-212ENST00000576708 OR10A6Q8NH74 314 aa5.31□□□□□ -1.56
NUP88-212ENST00000576708 OR6X1Q8NH79 312 aa5.31□□□□□ -1.56
NUP88-212ENST00000576708 PFN4Q8NHR9 129 aa5.31□□□□□ -1.56
NUP88-212ENST00000576708 ADAMTS16Q8TE57 1224 aa5.31□□□□□ -1.56
NUP88-212ENST00000576708 C17orf50Q8WW18 174 aa5.31□□□□□ -1.56
NUP88-212ENST00000576708 DYDC1Q8WWB3 177 aa5.31□□□□□ -1.56
NUP88-212ENST00000576708 RSRC1Q96IZ7 334 aaKnown RBP5.31□□□□□ -1.56
NUP88-212ENST00000576708 ATP6V1G3Q96LB4 118 aa5.31□□□□□ -1.56
NUP88-212ENST00000576708 ZNF347Q96SE7 839 aa5.31□□□□□ -1.56
NUP88-212ENST00000576708 MNTQ99583 582 aa5.31□□□□□ -1.56
NUP88-212ENST00000576708 CGREF1Q99674 301 aa5.31□□□□□ -1.56
NUP88-212ENST00000576708 PRSS27Q9BQR3 290 aa5.31□□□□□ -1.56
NUP88-212ENST00000576708 METTL17Q9H7H0 456 aaPredicted RBP5.31□□□□□ -1.56
NUP88-212ENST00000576708 RNF121Q9H920 327 aa5.31□□□□□ -1.56
NUP88-212ENST00000576708 MEPEQ9NQ76 525 aaPredicted RBP5.31□□□□□ -1.56
NUP88-212ENST00000576708 ZNF275Q9NSD4 429 aaPredicted RBP5.31□□□□□ -1.56
NUP88-212ENST00000576708 TMEM38BQ9NVV0 291 aa5.31□□□□□ -1.56
NUP88-212ENST00000576708 NKIRAS2Q9NYR9 191 aa5.31□□□□□ -1.56
NUP88-212ENST00000576708 TAAR3PQ9P1P4 343 aa5.31□□□□□ -1.56
NUP88-212ENST00000576708 LEF1Q9UJU2 399 aaPredicted RBP5.31□□□□□ -1.56
NUP88-212ENST00000576708 CORO2BQ9UQ03 480 aa5.31□□□□□ -1.56
NUP88-212ENST00000576708 IGKV1D-43A0A0B4J1Z2 117 aa5.3□□□□□ -1.56
NUP88-212ENST00000576708 A0A0B4J203 849 aa5.3□□□□□ -1.56
NUP88-212ENST00000576708 TRAPPC13A5PLN9 417 aa5.3□□□□□ -1.56
NUP88-212ENST00000576708 BLOC1S5-TXNDC5H3BN57 136 aa5.3□□□□□ -1.56
NUP88-212ENST00000576708 FBP2O00757 339 aa5.3□□□□□ -1.56
NUP88-212ENST00000576708 PPIHO43447 177 aaKnown RBP5.3□□□□□ -1.56
NUP88-212ENST00000576708 TCF21O43680 179 aa5.3□□□□□ -1.56
NUP88-212ENST00000576708 FMO6PO60774 539 aa5.3□□□□□ -1.56
NUP88-212ENST00000576708 E2F6O75461 281 aa5.3□□□□□ -1.56
NUP88-212ENST00000576708 MT-ATP6P00846 226 aa5.3□□□□□ -1.56
NUP88-212ENST00000576708 SERPINA5P05154 406 aa5.3□□□□□ -1.56
NUP88-212ENST00000576708 PGA4P0DJD7 388 aa5.3□□□□□ -1.56
NUP88-212ENST00000576708 PGA3P0DJD8 388 aa5.3□□□□□ -1.56
NUP88-212ENST00000576708 SAGP10523 405 aaPredicted RBP5.3□□□□□ -1.56
NUP88-212ENST00000576708 CDAP32320 146 aa5.3□□□□□ -1.56
NUP88-212ENST00000576708 AQP2P41181 271 aa5.3□□□□□ -1.56
NUP88-212ENST00000576708 EVX1P49640 407 aa5.3□□□□□ -1.56
NUP88-212ENST00000576708 GZMMP51124 257 aa5.3□□□□□ -1.56
NUP88-212ENST00000576708 DVL1P1P54792 670 aaPredicted RBP5.3□□□□□ -1.56
NUP88-212ENST00000576708 UGT2B15P54855 530 aa5.3□□□□□ -1.56
NUP88-212ENST00000576708 LMO4P61968 165 aa5.3□□□□□ -1.56
NUP88-212ENST00000576708 CCL8P80075 99 aa5.3□□□□□ -1.56
NUP88-212ENST00000576708 RBBP4Q09028 425 aa5.3□□□□□ -1.56
NUP88-212ENST00000576708 GALEQ14376 348 aa5.3□□□□□ -1.56
NUP88-212ENST00000576708 RABL3Q5HYI8 236 aa5.3□□□□□ -1.56
NUP88-212ENST00000576708 TMEM255AQ5JRV8 349 aa5.3□□□□□ -1.56
NUP88-212ENST00000576708 INTS11Q5TA45 600 aaKnown RBP5.3□□□□□ -1.56
NUP88-212ENST00000576708 LIPNQ5VXI9 398 aa5.3□□□□□ -1.56
NUP88-212ENST00000576708 RGS7BPQ6MZT1 257 aaPredicted RBP5.3□□□□□ -1.56
NUP88-212ENST00000576708 FIP1L1Q6UN15 594 aaKnown RBP5.3□□□□□ -1.56
NUP88-212ENST00000576708 DEF8Q6ZN54 512 aa5.3□□□□□ -1.56
NUP88-212ENST00000576708 USP51Q70EK9 711 aa5.3□□□□□ -1.56
NUP88-212ENST00000576708 ZNF771Q7L3S4 317 aaPredicted RBP5.3□□□□□ -1.56
NUP88-212ENST00000576708 SLC16A14Q7RTX9 510 aa5.3□□□□□ -1.56
NUP88-212ENST00000576708 PIWIL3Q7Z3Z3 882 aaKnown RBP5.3□□□□□ -1.56
NUP88-212ENST00000576708 MEX3DQ86XN8 651 aaKnown RBP5.3□□□□□ -1.56
NUP88-212ENST00000576708 LRRC18Q8N456 261 aa5.3□□□□□ -1.56
NUP88-212ENST00000576708 DPP10Q8N608 796 aa5.3□□□□□ -1.56
NUP88-212ENST00000576708 ICA1LQ8NDH6 482 aa5.3□□□□□ -1.56
NUP88-212ENST00000576708 SLC30A7Q8NEW0 376 aa5.3□□□□□ -1.56
NUP88-212ENST00000576708 MOSPD2Q8NHP6 518 aa5.3□□□□□ -1.56
NUP88-212ENST00000576708 SLC26A7Q8TE54 656 aa5.3□□□□□ -1.56
NUP88-212ENST00000576708 TMEM255BQ8WV15 326 aa5.3□□□□□ -1.56
NUP88-212ENST00000576708 RDH5Q92781 318 aa5.3□□□□□ -1.56
NUP88-212ENST00000576708 MCHR2Q969V1 340 aa5.3□□□□□ -1.56
NUP88-212ENST00000576708 ZNF566Q969W8 418 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms