RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 TSPYL5Q86VY4 417 aaPredicted RBP9.77□□□□□ -0.85
CTDNEP1-212ENST00000576613 JAZF1Q86VZ6 243 aa9.77□□□□□ -0.85
CTDNEP1-212ENST00000576613 HDAC2Q92769 488 aaKnown RBP9.77□□□□□ -0.85
CTDNEP1-212ENST00000576613 SGTBQ96EQ0 304 aa9.77□□□□□ -0.85
CTDNEP1-212ENST00000576613 MAGEB18Q96M61 343 aa9.77□□□□□ -0.85
CTDNEP1-212ENST00000576613 RBP7Q96R05 134 aa9.77□□□□□ -0.85
CTDNEP1-212ENST00000576613 OR2V2Q96R30 315 aa9.77□□□□□ -0.85
CTDNEP1-212ENST00000576613 PRSS27Q9BQR3 290 aa9.77□□□□□ -0.85
CTDNEP1-212ENST00000576613 ALG12Q9BV10 488 aa9.77□□□□□ -0.85
CTDNEP1-212ENST00000576613 TXNIPQ9H3M7 391 aa9.77□□□□□ -0.85
CTDNEP1-212ENST00000576613 TBCCD1Q9NVR7 557 aa9.77□□□□□ -0.85
CTDNEP1-212ENST00000576613 PDP1Q9P0J1 537 aaPredicted RBP9.77□□□□□ -0.85
CTDNEP1-212ENST00000576613 PRKDCP78527 4128 aaKnown RBP9.77□□□□□ -0.85
CTDNEP1-212ENST00000576613 IGKV1D-43A0A0B4J1Z2 117 aa9.76□□□□□ -0.85
CTDNEP1-212ENST00000576613 MDFIC2A0A1B0GVS7 189 aa9.76□□□□□ -0.85
CTDNEP1-212ENST00000576613 A0A1W2PPL8 197 aa9.76□□□□□ -0.85
CTDNEP1-212ENST00000576613 SRRM5B3KS81 715 aa9.76□□□□□ -0.85
CTDNEP1-212ENST00000576613 ERLIN1O75477 346 aa9.76□□□□□ -0.85
CTDNEP1-212ENST00000576613 WNT2P09544 360 aa9.76□□□□□ -0.85
CTDNEP1-212ENST00000576613 KITLGP21583 273 aa9.76□□□□□ -0.85
CTDNEP1-212ENST00000576613 MMP16P51512 607 aa9.76□□□□□ -0.85
CTDNEP1-212ENST00000576613 TAS2R41P59536 307 aa9.76□□□□□ -0.85
CTDNEP1-212ENST00000576613 BPIFB3P59826 476 aa9.76□□□□□ -0.85
CTDNEP1-212ENST00000576613 PAX2Q02962 417 aa9.76□□□□□ -0.85
CTDNEP1-212ENST00000576613 TOP3AQ13472 1001 aaPredicted RBP9.76□□□□□ -0.85
CTDNEP1-212ENST00000576613 AGKQ53H12 422 aa9.76□□□□□ -0.85
CTDNEP1-212ENST00000576613 RUNDC3AQ59EK9 446 aa9.76□□□□□ -0.85
CTDNEP1-212ENST00000576613 ALG10Q5BKT4 473 aa9.76□□□□□ -0.85
CTDNEP1-212ENST00000576613 OLFML2AQ68BL7 652 aa9.76□□□□□ -0.85
CTDNEP1-212ENST00000576613 SLC25A47Q6Q0C1 308 aa9.76□□□□□ -0.85
CTDNEP1-212ENST00000576613 DLEU7Q6UYE1 221 aa9.76□□□□□ -0.85
CTDNEP1-212ENST00000576613 NLRC3Q7RTR2 1065 aa9.76□□□□□ -0.85
CTDNEP1-212ENST00000576613 KIR3DL3Q8N743 410 aa9.76□□□□□ -0.85
CTDNEP1-212ENST00000576613 MOSPD2Q8NHP6 518 aa9.76□□□□□ -0.85
CTDNEP1-212ENST00000576613 PFN4Q8NHR9 129 aa9.76□□□□□ -0.85
CTDNEP1-212ENST00000576613 TMEM239Q8WW34 195 aa9.76□□□□□ -0.85
CTDNEP1-212ENST00000576613 ITLN1Q8WWA0 313 aa9.76□□□□□ -0.85
CTDNEP1-212ENST00000576613 LIPHQ8WWY8 451 aa9.76□□□□□ -0.85
CTDNEP1-212ENST00000576613 RAB40AQ8WXH6 277 aa9.76□□□□□ -0.85
CTDNEP1-212ENST00000576613 UBE2FQ969M7 185 aa9.76□□□□□ -0.85
CTDNEP1-212ENST00000576613 COG8Q96MW5 612 aa9.76□□□□□ -0.85
CTDNEP1-212ENST00000576613 CITED1Q99966 193 aa9.76□□□□□ -0.85
CTDNEP1-212ENST00000576613 WACQ9BTA9 647 aa9.76□□□□□ -0.85
CTDNEP1-212ENST00000576613 POLR2J2Q9GZM3 115 aaKnown RBP9.76□□□□□ -0.85
CTDNEP1-212ENST00000576613 POLR2J3Q9H1A7 115 aaKnown RBP9.76□□□□□ -0.85
CTDNEP1-212ENST00000576613 GCM1Q9NP62 436 aa9.76□□□□□ -0.85
CTDNEP1-212ENST00000576613 ARMCX1Q9P291 453 aa9.76□□□□□ -0.85
CTDNEP1-212ENST00000576613 MIOXQ9UGB7 285 aa9.76□□□□□ -0.85
CTDNEP1-212ENST00000576613 TSPAN19P0C672 248 aa9.75□□□□□ -0.85
CTDNEP1-212ENST00000576613 COX5BP10606 129 aa9.75□□□□□ -0.85
CTDNEP1-212ENST00000576613 MSR1P21757 451 aa9.75□□□□□ -0.85
CTDNEP1-212ENST00000576613 RBMXP38159 391 aaKnown RBP9.75□□□□□ -0.85
CTDNEP1-212ENST00000576613 IDH3AP50213 366 aa9.75□□□□□ -0.85
CTDNEP1-212ENST00000576613 MTPNP58546 118 aa9.75□□□□□ -0.85
CTDNEP1-212ENST00000576613 GUCY1A3Q02108 690 aa9.75□□□□□ -0.85
CTDNEP1-212ENST00000576613 SRSF4Q08170 494 aaKnown RBP9.75□□□□□ -0.85
CTDNEP1-212ENST00000576613 SCRN3Q0VDG4 424 aa9.75□□□□□ -0.85
CTDNEP1-212ENST00000576613 PDCD1Q15116 288 aa9.75□□□□□ -0.85
CTDNEP1-212ENST00000576613 DEFB112Q30KQ8 113 aa9.75□□□□□ -0.85
CTDNEP1-212ENST00000576613 GPR157Q5UAW9 335 aa9.75□□□□□ -0.85
CTDNEP1-212ENST00000576613 SLC27A4Q6P1M0 643 aa9.75□□□□□ -0.85
CTDNEP1-212ENST00000576613 FIP1L1Q6UN15 594 aaKnown RBP9.75□□□□□ -0.85
CTDNEP1-212ENST00000576613 Q6ZR03 302 aa9.75□□□□□ -0.85
CTDNEP1-212ENST00000576613 FOXL2NBQ6ZUU3 175 aa9.75□□□□□ -0.85
CTDNEP1-212ENST00000576613 DHDDSQ86SQ9 333 aa9.75□□□□□ -0.85
CTDNEP1-212ENST00000576613 KLBQ86Z14 1044 aa9.75□□□□□ -0.85
CTDNEP1-212ENST00000576613 OR10S1Q8NGN2 331 aa9.75□□□□□ -0.85
CTDNEP1-212ENST00000576613 TMEM255BQ8WV15 326 aa9.75□□□□□ -0.85
CTDNEP1-212ENST00000576613 TAMM41Q96BW9 452 aa9.75□□□□□ -0.85
CTDNEP1-212ENST00000576613 NEIL1Q96FI4 390 aaPredicted RBP9.75□□□□□ -0.85
CTDNEP1-212ENST00000576613 PKP2Q99959 881 aa9.75□□□□□ -0.85
CTDNEP1-212ENST00000576613 SLC30A2Q9BRI3 323 aa9.75□□□□□ -0.85
CTDNEP1-212ENST00000576613 CCDC28BQ9BUN5 200 aa9.75□□□□□ -0.85
CTDNEP1-212ENST00000576613 PRDM13Q9H4Q3 707 aa9.75□□□□□ -0.85
CTDNEP1-212ENST00000576613 RABEP2Q9H5N1 569 aa9.75□□□□□ -0.85
CTDNEP1-212ENST00000576613 NOX4Q9NPH5 578 aa9.75□□□□□ -0.85
CTDNEP1-212ENST00000576613 C20orf141Q9NUB4 165 aa9.75□□□□□ -0.85
CTDNEP1-212ENST00000576613 KIF17Q9P2E2 1029 aa9.75□□□□□ -0.85
CTDNEP1-212ENST00000576613 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.75□□□□□ -0.85
CTDNEP1-212ENST00000576613 HIF3AQ9Y2N7 669 aa9.75□□□□□ -0.85
CTDNEP1-212ENST00000576613 SH3GLB1Q9Y371 365 aa9.75□□□□□ -0.85
CTDNEP1-212ENST00000576613 MED31Q9Y3C7 131 aa9.75□□□□□ -0.85
CTDNEP1-212ENST00000576613 SOX21Q9Y651 276 aaPredicted RBP9.75□□□□□ -0.85
CTDNEP1-212ENST00000576613 V9GYY5 206 aaPredicted RBP9.75□□□□□ -0.85
CTDNEP1-212ENST00000576613 KIR2DS1A0A191URI9 304 aa9.74□□□□□ -0.85
CTDNEP1-212ENST00000576613 CLPSL1A2RUU4 121 aa9.74□□□□□ -0.85
CTDNEP1-212ENST00000576613 A6NIZ1 184 aa9.74□□□□□ -0.85
CTDNEP1-212ENST00000576613 LRRC30A6NM36 301 aa9.74□□□□□ -0.85
CTDNEP1-212ENST00000576613 ANGPT2O15123 496 aa9.74□□□□□ -0.85
CTDNEP1-212ENST00000576613 DOK2O60496 412 aa9.74□□□□□ -0.85
CTDNEP1-212ENST00000576613 NDUFA7O95182 113 aa9.74□□□□□ -0.85
CTDNEP1-212ENST00000576613 OR5F1O95221 314 aa9.74□□□□□ -0.85
CTDNEP1-212ENST00000576613 HTR5AP47898 357 aa9.74□□□□□ -0.85
CTDNEP1-212ENST00000576613 RAP1BP61224 184 aa9.74□□□□□ -0.85
CTDNEP1-212ENST00000576613 RPL15P61313 204 aaKnown RBP9.74□□□□□ -0.85
CTDNEP1-212ENST00000576613 RPL27P61353 136 aaKnown RBP9.74□□□□□ -0.85
CTDNEP1-212ENST00000576613 RAP1AP62834 184 aa9.74□□□□□ -0.85
CTDNEP1-212ENST00000576613 ENDOGQ14249 297 aaKnown RBP9.74□□□□□ -0.85
CTDNEP1-212ENST00000576613 LAPTM4AQ15012 233 aa9.74□□□□□ -0.85
CTDNEP1-212ENST00000576613 TTMPQ5BVD1 217 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms