RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 PSG4Q00888 419 aa12.62□□□□□ -0.39
NPLOC4-218ENST00000574964 TBC1D28Q2M2D7 210 aa12.62□□□□□ -0.39
NPLOC4-218ENST00000574964 AADACL4Q5VUY2 407 aa12.62□□□□□ -0.39
NPLOC4-218ENST00000574964 MEDAGQ5VYS4 303 aa12.62□□□□□ -0.39
NPLOC4-218ENST00000574964 ZNF774Q6NX45 483 aa12.62□□□□□ -0.39
NPLOC4-218ENST00000574964 TMEM154Q6P9G4 183 aa12.62□□□□□ -0.39
NPLOC4-218ENST00000574964 CORO6Q6QEF8 472 aa12.62□□□□□ -0.39
NPLOC4-218ENST00000574964 SLC22A25Q6T423 547 aa12.62□□□□□ -0.39
NPLOC4-218ENST00000574964 SEZ6L2Q6UXD5 910 aa12.62□□□□□ -0.39
NPLOC4-218ENST00000574964 B3GLCTQ6Y288 498 aa12.62□□□□□ -0.39
NPLOC4-218ENST00000574964 SHFQ7M4L6 423 aa12.62□□□□□ -0.39
NPLOC4-218ENST00000574964 OR1J2Q8NGS2 313 aa12.62□□□□□ -0.39
NPLOC4-218ENST00000574964 C14orf79Q96F83 325 aa12.62□□□□□ -0.39
NPLOC4-218ENST00000574964 MS4A3Q96HJ5 214 aa12.62□□□□□ -0.39
NPLOC4-218ENST00000574964 Q96MT0 163 aa12.62□□□□□ -0.39
NPLOC4-218ENST00000574964 TEAD3Q99594 435 aa12.62□□□□□ -0.39
NPLOC4-218ENST00000574964 WDR76Q9H967 626 aa12.62□□□□□ -0.39
NPLOC4-218ENST00000574964 CDH20Q9HBT6 801 aa12.62□□□□□ -0.39
NPLOC4-218ENST00000574964 POU2F3Q9UKI9 436 aa12.62□□□□□ -0.39
NPLOC4-218ENST00000574964 LHFPL6Q9Y693 200 aa12.62□□□□□ -0.39
NPLOC4-218ENST00000574964 E9PQ18 207 aa12.61□□□□□ -0.39
NPLOC4-218ENST00000574964 H0YAE9 185 aa12.61□□□□□ -0.39
NPLOC4-218ENST00000574964 RER1O15258 196 aa12.61□□□□□ -0.39
NPLOC4-218ENST00000574964 SIAH2O43255 324 aa12.61□□□□□ -0.39
NPLOC4-218ENST00000574964 CTAG2O75638 210 aa12.61□□□□□ -0.39
NPLOC4-218ENST00000574964 CLIC3O95833 236 aa12.61□□□□□ -0.39
NPLOC4-218ENST00000574964 ZNF14P17017 642 aaPredicted RBP12.61□□□□□ -0.39
NPLOC4-218ENST00000574964 CCNOP22674 350 aa12.61□□□□□ -0.39
NPLOC4-218ENST00000574964 APEX1P27695 318 aaKnown RBP12.61□□□□□ -0.39
NPLOC4-218ENST00000574964 NAA10P41227 235 aaPredicted RBP12.61□□□□□ -0.39
NPLOC4-218ENST00000574964 RPS27P42677 84 aaKnown RBP12.61□□□□□ -0.39
NPLOC4-218ENST00000574964 HTR5AP47898 357 aa12.61□□□□□ -0.39
NPLOC4-218ENST00000574964 GDI2P50395 445 aaKnown RBP12.61□□□□□ -0.39
NPLOC4-218ENST00000574964 ADARB1P78563 741 aaKnown RBP12.61□□□□□ -0.39
NPLOC4-218ENST00000574964 GALK2Q01415 458 aa12.61□□□□□ -0.39
NPLOC4-218ENST00000574964 NAAAQ02083 359 aa12.61□□□□□ -0.39
NPLOC4-218ENST00000574964 IL18R1Q13478 541 aa12.61□□□□□ -0.39
NPLOC4-218ENST00000574964 ADAM5Q6NVV9 412 aa12.61□□□□□ -0.39
NPLOC4-218ENST00000574964 IZUMO2Q6UXV1 221 aa12.61□□□□□ -0.39
NPLOC4-218ENST00000574964 ZNF295-AS1Q8N0V1 137 aa12.61□□□□□ -0.39
NPLOC4-218ENST00000574964 SLC30A7Q8NEW0 376 aa12.61□□□□□ -0.39
NPLOC4-218ENST00000574964 ZNF582Q96NG8 517 aaPredicted RBP12.61□□□□□ -0.39
NPLOC4-218ENST00000574964 WNT5BQ9H1J7 359 aa12.61□□□□□ -0.39
NPLOC4-218ENST00000574964 WARS2Q9UGM6 360 aaKnown RBP12.61□□□□□ -0.39
NPLOC4-218ENST00000574964 CYB5R1Q9UHQ9 305 aa12.61□□□□□ -0.39
NPLOC4-218ENST00000574964 GDF2Q9UK05 429 aaPredicted RBP12.61□□□□□ -0.39
NPLOC4-218ENST00000574964 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.61□□□□□ -0.39
NPLOC4-218ENST00000574964 ATP23Q9Y6H3 246 aa12.61□□□□□ -0.39
NPLOC4-218ENST00000574964 UTP20O75691 2785 aaKnown RBP12.61□□□□□ -0.39
NPLOC4-218ENST00000574964 AKAP6Q13023 2319 aa12.61□□□□□ -0.39
NPLOC4-218ENST00000574964 COL12A1Q99715 3063 aa12.6□□□□□ -0.39
NPLOC4-218ENST00000574964 CCDC182A6NF36 153 aa12.6□□□□□ -0.39
NPLOC4-218ENST00000574964 SELENOFO60613 162 aa12.6□□□□□ -0.39
NPLOC4-218ENST00000574964 ENTPD6O75354 484 aa12.6□□□□□ -0.39
NPLOC4-218ENST00000574964 MRPL3P09001 348 aaKnown RBP12.6□□□□□ -0.39
NPLOC4-218ENST00000574964 STOMP27105 288 aa12.6□□□□□ -0.39
NPLOC4-218ENST00000574964 HTR1FP30939 366 aa12.6□□□□□ -0.39
NPLOC4-218ENST00000574964 HSPA13P48723 471 aa12.6□□□□□ -0.39
NPLOC4-218ENST00000574964 EIF2B1Q14232 305 aaKnown RBP12.6□□□□□ -0.39
NPLOC4-218ENST00000574964 RAB35Q15286 201 aa12.6□□□□□ -0.39
NPLOC4-218ENST00000574964 TAF13Q15543 124 aa12.6□□□□□ -0.39
NPLOC4-218ENST00000574964 SNCBQ16143 134 aa12.6□□□□□ -0.39
NPLOC4-218ENST00000574964 OCLNQ16625 522 aa12.6□□□□□ -0.39
NPLOC4-218ENST00000574964 TEX30Q5JUR7 227 aa12.6□□□□□ -0.39
NPLOC4-218ENST00000574964 ZNF691Q5VV52 312 aa12.6□□□□□ -0.39
NPLOC4-218ENST00000574964 SLC18B1Q6NT16 456 aa12.6□□□□□ -0.39
NPLOC4-218ENST00000574964 ZNF704Q6ZNC4 412 aaPredicted RBP12.6□□□□□ -0.39
NPLOC4-218ENST00000574964 DPY19L4Q7Z388 723 aa12.6□□□□□ -0.39
NPLOC4-218ENST00000574964 ENTHD1Q8IYW4 607 aa12.6□□□□□ -0.39
NPLOC4-218ENST00000574964 C8orf59Q8N0T1 100 aaPredicted RBP12.6□□□□□ -0.39
NPLOC4-218ENST00000574964 ZNF75AQ96N20 296 aa12.6□□□□□ -0.39
NPLOC4-218ENST00000574964 HS3ST6Q96QI5 342 aa12.6□□□□□ -0.39
NPLOC4-218ENST00000574964 CNN2Q99439 309 aaKnown RBP12.6□□□□□ -0.39
NPLOC4-218ENST00000574964 CLEC4MQ9H2X3 399 aaPredicted RBP12.6□□□□□ -0.39
NPLOC4-218ENST00000574964 MARCH7Q9H992 704 aa12.6□□□□□ -0.39
NPLOC4-218ENST00000574964 AASSQ9UDR5 926 aa12.6□□□□□ -0.39
NPLOC4-218ENST00000574964 SPEF1Q9Y4P9 236 aa12.6□□□□□ -0.39
NPLOC4-218ENST00000574964 ATP6V1G2-DDX39BF2Z307 99 aa12.59□□□□□ -0.39
NPLOC4-218ENST00000574964 PLAUP00749 431 aa12.59□□□□□ -0.39
NPLOC4-218ENST00000574964 CCL2P13500 99 aa12.59□□□□□ -0.39
NPLOC4-218ENST00000574964 SPOCK1Q08629 439 aa12.59□□□□□ -0.39
NPLOC4-218ENST00000574964 TMED1Q13445 227 aa12.59□□□□□ -0.39
NPLOC4-218ENST00000574964 CCDC92Q53HC0 331 aaPredicted RBP12.59□□□□□ -0.39
NPLOC4-218ENST00000574964 ELFN2Q5R3F8 820 aa12.59□□□□□ -0.39
NPLOC4-218ENST00000574964 VASH1Q7L8A9 365 aaPredicted RBP12.59□□□□□ -0.39
NPLOC4-218ENST00000574964 SLC16A9Q7RTY1 509 aa12.59□□□□□ -0.39
NPLOC4-218ENST00000574964 DCXRQ7Z4W1 244 aa12.59□□□□□ -0.39
NPLOC4-218ENST00000574964 MYPOPQ86VE0 399 aaPredicted RBP12.59□□□□□ -0.39
NPLOC4-218ENST00000574964 ZNF584Q8IVC4 421 aa12.59□□□□□ -0.39
NPLOC4-218ENST00000574964 TIGD4Q8IY51 512 aa12.59□□□□□ -0.39
NPLOC4-218ENST00000574964 ZNF454Q8N9F8 522 aa12.59□□□□□ -0.39
NPLOC4-218ENST00000574964 CPEB3Q8NE35 698 aaKnown RBP12.59□□□□□ -0.39
NPLOC4-218ENST00000574964 KBTBD8Q8NFY9 601 aa12.59□□□□□ -0.39
NPLOC4-218ENST00000574964 OR51G2Q8NGK0 314 aa12.59□□□□□ -0.39
NPLOC4-218ENST00000574964 OR1F12Q8NHA8 337 aa12.59□□□□□ -0.39
NPLOC4-218ENST00000574964 RHOXF1Q8NHV9 184 aa12.59□□□□□ -0.39
NPLOC4-218ENST00000574964 THEM6Q8WUY1 208 aa12.59□□□□□ -0.39
NPLOC4-218ENST00000574964 HDHD2Q9H0R4 259 aa12.59□□□□□ -0.39
NPLOC4-218ENST00000574964 CENPMQ9NSP4 180 aa12.59□□□□□ -0.39
NPLOC4-218ENST00000574964 EIF3KQ9UBQ5 218 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms