RNA–Protein interactions for RNA: ENST00000574234.1

TRIM25-208, Transcript of tripartite motif containing 25, humanhuman

TSL 2

Gene TRIM25, Length 471 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-208ENST00000574234 SLCO1C1Q9NYB5 712 aa4.25□□□□□ -1.73
TRIM25-208ENST00000574234 AURKCQ9UQB9 309 aa4.25□□□□□ -1.73
TRIM25-208ENST00000574234 SLC9A8Q9Y2E8 581 aa4.25□□□□□ -1.73
TRIM25-208ENST00000574234 RRP15Q9Y3B9 282 aaKnown RBP4.25□□□□□ -1.73
TRIM25-208ENST00000574234 STRAPQ9Y3F4 350 aaKnown RBP4.25□□□□□ -1.73
TRIM25-208ENST00000574234 IGHV3OR16-10A0A075B7F0 116 aa4.24□□□□□ -1.73
TRIM25-208ENST00000574234 ZNF816-ZNF321PA0A0X1KG74 233 aa4.24□□□□□ -1.73
TRIM25-208ENST00000574234 C13orf42A0A1B0GVH6 325 aa4.24□□□□□ -1.73
TRIM25-208ENST00000574234 SULT2B1O00204 365 aa4.24□□□□□ -1.73
TRIM25-208ENST00000574234 MGST3O14880 152 aa4.24□□□□□ -1.73
TRIM25-208ENST00000574234 DUS4LO95620 317 aaKnown RBP4.24□□□□□ -1.73
TRIM25-208ENST00000574234 OR2T7P0C7T2 308 aa4.24□□□□□ -1.73
TRIM25-208ENST00000574234 ZSCAN5DPP0CG00 497 aa4.24□□□□□ -1.73
TRIM25-208ENST00000574234 CBR1P16152 277 aa4.24□□□□□ -1.73
TRIM25-208ENST00000574234 LCN1P31025 176 aa4.24□□□□□ -1.73
TRIM25-208ENST00000574234 SLC6A6P31641 620 aa4.24□□□□□ -1.73
TRIM25-208ENST00000574234 CD80P33681 288 aa4.24□□□□□ -1.73
TRIM25-208ENST00000574234 ARR3P36575 388 aa4.24□□□□□ -1.73
TRIM25-208ENST00000574234 ACAA2P42765 397 aaKnown RBP4.24□□□□□ -1.73
TRIM25-208ENST00000574234 ALDH3B1P43353 468 aa4.24□□□□□ -1.73
TRIM25-208ENST00000574234 MAGEB1P43366 347 aa4.24□□□□□ -1.73
TRIM25-208ENST00000574234 ASMTP46597 345 aa4.24□□□□□ -1.73
TRIM25-208ENST00000574234 HTR6P50406 440 aa4.24□□□□□ -1.73
TRIM25-208ENST00000574234 KRTAP10-11P60412 298 aa4.24□□□□□ -1.73
TRIM25-208ENST00000574234 KCNJ10P78508 379 aa4.24□□□□□ -1.73
TRIM25-208ENST00000574234 ZNF155Q12901 538 aaPredicted RBP4.24□□□□□ -1.73
TRIM25-208ENST00000574234 UBE2V1Q13404 147 aa4.24□□□□□ -1.73
TRIM25-208ENST00000574234 TRADDQ15628 312 aa4.24□□□□□ -1.73
TRIM25-208ENST00000574234 ASPHD1Q5U4P2 390 aa4.24□□□□□ -1.73
TRIM25-208ENST00000574234 PRAMEF8Q5VWM4 474 aa4.24□□□□□ -1.73
TRIM25-208ENST00000574234 LIPJQ5W064 366 aa4.24□□□□□ -1.73
TRIM25-208ENST00000574234 OGFOD2Q6N063 350 aa4.24□□□□□ -1.73
TRIM25-208ENST00000574234 SASS6Q6UVJ0 657 aa4.24□□□□□ -1.73
TRIM25-208ENST00000574234 LRRN1Q6UXK5 716 aa4.24□□□□□ -1.73
TRIM25-208ENST00000574234 CASP12Q6UXS9 341 aa4.24□□□□□ -1.73
TRIM25-208ENST00000574234 FRRS1Q6ZNA5 592 aa4.24□□□□□ -1.73
TRIM25-208ENST00000574234 TMPPEQ6ZT21 453 aa4.24□□□□□ -1.73
TRIM25-208ENST00000574234 MTERF4Q7Z6M4 381 aaKnown RBP4.24□□□□□ -1.73
TRIM25-208ENST00000574234 PIGWQ7Z7B1 504 aa4.24□□□□□ -1.73
TRIM25-208ENST00000574234 MYPOPQ86VE0 399 aaPredicted RBP4.24□□□□□ -1.73
TRIM25-208ENST00000574234 LDLRAD3Q86YD5 345 aa4.24□□□□□ -1.73
TRIM25-208ENST00000574234 SERPINA12Q8IW75 414 aa4.24□□□□□ -1.73
TRIM25-208ENST00000574234 PNLDC1Q8NA58 520 aaKnown RBP4.24□□□□□ -1.73
TRIM25-208ENST00000574234 OR4F17Q8NGA8 305 aa4.24□□□□□ -1.73
TRIM25-208ENST00000574234 OR1K1Q8NGR3 316 aa4.24□□□□□ -1.73
TRIM25-208ENST00000574234 OR9A2Q8NGT5 310 aa4.24□□□□□ -1.73
TRIM25-208ENST00000574234 OSR1Q8TAX0 266 aaPredicted RBP4.24□□□□□ -1.73
TRIM25-208ENST00000574234 ESAMQ96AP7 390 aa4.24□□□□□ -1.73
TRIM25-208ENST00000574234 ZHX1-C8orf76Q96EF9 292 aa4.24□□□□□ -1.73
TRIM25-208ENST00000574234 OR4F4Q96R69 305 aa4.24□□□□□ -1.73
TRIM25-208ENST00000574234 SERPINI1Q99574 410 aa4.24□□□□□ -1.73
TRIM25-208ENST00000574234 CHP1Q99653 195 aa4.24□□□□□ -1.73
TRIM25-208ENST00000574234 KLHDC3Q9BQ90 382 aa4.24□□□□□ -1.73
TRIM25-208ENST00000574234 LMF2Q9BU23 707 aaKnown RBP4.24□□□□□ -1.73
TRIM25-208ENST00000574234 LAT2Q9GZY6 243 aa4.24□□□□□ -1.73
TRIM25-208ENST00000574234 NAT10Q9H0A0 1025 aaKnown RBP4.24□□□□□ -1.73
TRIM25-208ENST00000574234 NHEJ1Q9H9Q4 299 aaPredicted RBP4.24□□□□□ -1.73
TRIM25-208ENST00000574234 RNPEPL1Q9HAU8 725 aa4.24□□□□□ -1.73
TRIM25-208ENST00000574234 PPANQ9NQ55 473 aaKnown RBP4.24□□□□□ -1.73
TRIM25-208ENST00000574234 TMEM45AQ9NWC5 275 aa4.24□□□□□ -1.73
TRIM25-208ENST00000574234 DCAF16Q9NXF7 216 aa4.24□□□□□ -1.73
TRIM25-208ENST00000574234 RHCGQ9UBD6 479 aa4.24□□□□□ -1.73
TRIM25-208ENST00000574234 GRID1Q9ULK0 1009 aa4.24□□□□□ -1.73
TRIM25-208ENST00000574234 HUWE1Q7Z6Z7 4374 aaKnown RBP4.23□□□□□ -1.73
TRIM25-208ENST00000574234 TRBV5-3A0A0A0MS03 114 aa4.23□□□□□ -1.73
TRIM25-208ENST00000574234 MAGEA13PA6NCF6 341 aa4.23□□□□□ -1.73
TRIM25-208ENST00000574234 FAM90A26D6RGX4 464 aa4.23□□□□□ -1.73
TRIM25-208ENST00000574234 TNFRSF13BO14836 293 aaPredicted RBP4.23□□□□□ -1.73
TRIM25-208ENST00000574234 SPINT2O43291 252 aa4.23□□□□□ -1.73
TRIM25-208ENST00000574234 PEX11AO75192 247 aa4.23□□□□□ -1.73
TRIM25-208ENST00000574234 H6PDO95479 791 aa4.23□□□□□ -1.73
TRIM25-208ENST00000574234 KLK1P06870 262 aa4.23□□□□□ -1.73
TRIM25-208ENST00000574234 CSN3P07498 182 aa4.23□□□□□ -1.73
TRIM25-208ENST00000574234 IFI6P09912 130 aa4.23□□□□□ -1.73
TRIM25-208ENST00000574234 SPP1P10451 314 aa4.23□□□□□ -1.73
TRIM25-208ENST00000574234 IGLL1P15814 213 aa4.23□□□□□ -1.73
TRIM25-208ENST00000574234 MPZP25189 248 aa4.23□□□□□ -1.73
TRIM25-208ENST00000574234 LMO1P25800 156 aa4.23□□□□□ -1.73
TRIM25-208ENST00000574234 MAGEA3P43357 314 aa4.23□□□□□ -1.73
TRIM25-208ENST00000574234 IER3P46695 156 aa4.23□□□□□ -1.73
TRIM25-208ENST00000574234 P2RX1P51575 399 aa4.23□□□□□ -1.73
TRIM25-208ENST00000574234 MAPK12P53778 367 aa4.23□□□□□ -1.73
TRIM25-208ENST00000574234 SH3BGRP55822 239 aaPredicted RBP4.23□□□□□ -1.73
TRIM25-208ENST00000574234 GMFBP60983 142 aa4.23□□□□□ -1.73
TRIM25-208ENST00000574234 RPS23P62266 143 aaKnown RBP4.23□□□□□ -1.73
TRIM25-208ENST00000574234 TRA2BP62995 288 aaKnown RBP4.23□□□□□ -1.73
TRIM25-208ENST00000574234 H3F3AP84243 136 aa4.23□□□□□ -1.73
TRIM25-208ENST00000574234 PAX2Q02962 417 aa4.23□□□□□ -1.73
TRIM25-208ENST00000574234 ZNF117Q03924 483 aa4.23□□□□□ -1.73
TRIM25-208ENST00000574234 EGR4Q05215 589 aa4.23□□□□□ -1.73
TRIM25-208ENST00000574234 SLC3A1Q07837 685 aa4.23□□□□□ -1.73
TRIM25-208ENST00000574234 GAGE2BQ13066 116 aa4.23□□□□□ -1.73
TRIM25-208ENST00000574234 MAD2L1BPQ15013 274 aaPredicted RBP4.23□□□□□ -1.73
TRIM25-208ENST00000574234 GAGE2EQ4V326 116 aa4.23□□□□□ -1.73
TRIM25-208ENST00000574234 FBXO48Q5FWF7 155 aa4.23□□□□□ -1.73
TRIM25-208ENST00000574234 PIK3CD-AS1Q5SR53 167 aa4.23□□□□□ -1.73
TRIM25-208ENST00000574234 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.23□□□□□ -1.732e-7■■■■□ 20.2
TRIM25-208ENST00000574234 CCNYL2Q5T2Q4 361 aa4.23□□□□□ -1.73
TRIM25-208ENST00000574234 GPR157Q5UAW9 335 aa4.23□□□□□ -1.73
TRIM25-208ENST00000574234 CLEC6AQ6EIG7 209 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms