RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 PIMREGQ9BSJ6 248 aa12.49□□□□□ -0.41
LITAF-208ENST00000571627 EGLN3Q9H6Z9 239 aa12.49□□□□□ -0.41
LITAF-208ENST00000571627 FBXO9Q9UK97 447 aaPredicted RBP12.49□□□□□ -0.41
LITAF-208ENST00000571627 BAIAP2Q9UQB8 552 aa12.49□□□□□ -0.41
LITAF-208ENST00000571627 C5orf49A4QMS7 147 aa12.48□□□□□ -0.41
LITAF-208ENST00000571627 C12orf71A8MTZ7 269 aa12.48□□□□□ -0.41
LITAF-208ENST00000571627 VWC2LB2RUY7 222 aa12.48□□□□□ -0.41
LITAF-208ENST00000571627 LYNX1G3V0Z9 82 aa12.48□□□□□ -0.41
LITAF-208ENST00000571627 ERCC1P07992 297 aaPredicted RBP12.48□□□□□ -0.41
LITAF-208ENST00000571627 LYNX1P0DP58 116 aa12.48□□□□□ -0.41
LITAF-208ENST00000571627 NAT2P11245 290 aa12.48□□□□□ -0.41
LITAF-208ENST00000571627 DAOP14920 347 aa12.48□□□□□ -0.41
LITAF-208ENST00000571627 HIST1H1CP16403 213 aaKnown RBP12.48□□□□□ -0.41
LITAF-208ENST00000571627 WNT5AP41221 380 aa12.48□□□□□ -0.41
LITAF-208ENST00000571627 NR4A2P43354 598 aa12.48□□□□□ -0.41
LITAF-208ENST00000571627 EVX1P49640 407 aa12.48□□□□□ -0.41
LITAF-208ENST00000571627 UCP2P55851 309 aa12.48□□□□□ -0.41
LITAF-208ENST00000571627 PPP2R2BQ00005 443 aa12.48□□□□□ -0.41
LITAF-208ENST00000571627 LOXL1Q08397 574 aaPredicted RBP12.48□□□□□ -0.41
LITAF-208ENST00000571627 GGTLC2Q14390 218 aa12.48□□□□□ -0.41
LITAF-208ENST00000571627 TMEM249Q2WGJ8 235 aa12.48□□□□□ -0.41
LITAF-208ENST00000571627 CLEC12AQ5QGZ9 265 aa12.48□□□□□ -0.41
LITAF-208ENST00000571627 SPATA46Q5T0L3 261 aa12.48□□□□□ -0.41
LITAF-208ENST00000571627 ZNF774Q6NX45 483 aa12.48□□□□□ -0.41
LITAF-208ENST00000571627 LEG1Q6P5S2 330 aa12.48□□□□□ -0.41
LITAF-208ENST00000571627 GLB1L2Q8IW92 636 aa12.48□□□□□ -0.41
LITAF-208ENST00000571627 ZNF101Q8IZC7 436 aa12.48□□□□□ -0.41
LITAF-208ENST00000571627 NRBF2Q96F24 287 aa12.48□□□□□ -0.41
LITAF-208ENST00000571627 TSSK2Q96PF2 358 aa12.48□□□□□ -0.41
LITAF-208ENST00000571627 FEVQ99581 238 aa12.48□□□□□ -0.41
LITAF-208ENST00000571627 TSSK6Q9BXA6 273 aa12.48□□□□□ -0.41
LITAF-208ENST00000571627 NUAK2Q9H093 628 aa12.48□□□□□ -0.41
LITAF-208ENST00000571627 ZNF556Q9HAH1 456 aa12.48□□□□□ -0.41
LITAF-208ENST00000571627 TBC1D23Q9NUY8 699 aa12.48□□□□□ -0.41
LITAF-208ENST00000571627 PDP1Q9P0J1 537 aaPredicted RBP12.48□□□□□ -0.41
LITAF-208ENST00000571627 REV1Q9UBZ9 1251 aa12.48□□□□□ -0.41
LITAF-208ENST00000571627 COA3Q9Y2R0 106 aaPredicted RBP12.48□□□□□ -0.41
LITAF-208ENST00000571627 TIMM10BQ9Y5J6 103 aa12.48□□□□□ -0.41
LITAF-208ENST00000571627 MALRD1Q5VYJ5 2156 aa12.47□□□□□ -0.41
LITAF-208ENST00000571627 LOC390937A0A1W2PQ73 354 aa12.47□□□□□ -0.41
LITAF-208ENST00000571627 DCTN6O00399 190 aa12.47□□□□□ -0.41
LITAF-208ENST00000571627 BHLHE40O14503 412 aa12.47□□□□□ -0.41
LITAF-208ENST00000571627 CD5LO43866 347 aa12.47□□□□□ -0.41
LITAF-208ENST00000571627 MPZL1O95297 269 aa12.47□□□□□ -0.41
LITAF-208ENST00000571627 GPANK1O95872 356 aa12.47□□□□□ -0.41
LITAF-208ENST00000571627 ANXA8P13928 327 aa12.47□□□□□ -0.41
LITAF-208ENST00000571627 USF1P22415 310 aaPredicted RBP12.47□□□□□ -0.41
LITAF-208ENST00000571627 RAD52P43351 418 aa12.47□□□□□ -0.41
LITAF-208ENST00000571627 GDI2P50395 445 aaKnown RBP12.47□□□□□ -0.41
LITAF-208ENST00000571627 ERFP50548 548 aa12.47□□□□□ -0.41
LITAF-208ENST00000571627 GLO1Q04760 184 aa12.47□□□□□ -0.41
LITAF-208ENST00000571627 NKPD1Q17RQ9 610 aa12.47□□□□□ -0.41
LITAF-208ENST00000571627 RFPL4BQ6ZWI9 263 aa12.47□□□□□ -0.41
LITAF-208ENST00000571627 ALDH16A1Q8IZ83 802 aa12.47□□□□□ -0.41
LITAF-208ENST00000571627 OR2T33Q8NG76 320 aa12.47□□□□□ -0.41
LITAF-208ENST00000571627 OR1J1Q8NGS3 322 aa12.47□□□□□ -0.41
LITAF-208ENST00000571627 OR4K13Q8NH42 304 aa12.47□□□□□ -0.41
LITAF-208ENST00000571627 SYNPRQ8TBG9 265 aa12.47□□□□□ -0.41
LITAF-208ENST00000571627 NEU4Q8WWR8 484 aaPredicted RBP12.47□□□□□ -0.41
LITAF-208ENST00000571627 DUS3LQ96G46 650 aaKnown RBP12.47□□□□□ -0.41
LITAF-208ENST00000571627 NMNAT3Q96T66 252 aa12.47□□□□□ -0.41
LITAF-208ENST00000571627 BCL2L14Q9BZR8 327 aa12.47□□□□□ -0.41
LITAF-208ENST00000571627 BPESC1Q9GZL8 116 aa12.47□□□□□ -0.41
LITAF-208ENST00000571627 MYOZ1Q9NP98 299 aaPredicted RBP12.47□□□□□ -0.41
LITAF-208ENST00000571627 YAE1D1Q9NRH1 226 aa12.47□□□□□ -0.41
LITAF-208ENST00000571627 ARMC1Q9NVT9 282 aa12.47□□□□□ -0.41
LITAF-208ENST00000571627 TAAR3PQ9P1P4 343 aa12.47□□□□□ -0.41
LITAF-208ENST00000571627 AP4S1Q9Y587 144 aa12.47□□□□□ -0.41
LITAF-208ENST00000571627 IGHV4-61A0A0C4DH41 118 aa12.46□□□□□ -0.41
LITAF-208ENST00000571627 NDUFS8O00217 210 aa12.46□□□□□ -0.41
LITAF-208ENST00000571627 TIPRLO75663 272 aa12.46□□□□□ -0.41
LITAF-208ENST00000571627 NCR1O76036 304 aa12.46□□□□□ -0.41
LITAF-208ENST00000571627 FCGR1AP12314 374 aa12.46□□□□□ -0.41
LITAF-208ENST00000571627 ZNF250P15622 560 aa12.46□□□□□ -0.41
LITAF-208ENST00000571627 CENPAP49450 140 aa12.46□□□□□ -0.41
LITAF-208ENST00000571627 KLF3P57682 345 aaPredicted RBP12.46□□□□□ -0.41
LITAF-208ENST00000571627 LSM6P62312 80 aaKnown RBP12.46□□□□□ -0.41
LITAF-208ENST00000571627 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.46□□□□□ -0.41
LITAF-208ENST00000571627 SCRN3Q0VDG4 424 aa12.46□□□□□ -0.41
LITAF-208ENST00000571627 CCNIQ14094 377 aa12.46□□□□□ -0.41
LITAF-208ENST00000571627 SLC35F1Q5T1Q4 408 aa12.46□□□□□ -0.41
LITAF-208ENST00000571627 SHQ1Q6PI26 577 aaKnown RBP12.46□□□□□ -0.41
LITAF-208ENST00000571627 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.46□□□□□ -0.41
LITAF-208ENST00000571627 TMEM179BQ7Z7N9 219 aa12.46□□□□□ -0.41
LITAF-208ENST00000571627 LNX2Q8N448 690 aa12.46□□□□□ -0.41
LITAF-208ENST00000571627 OR52E2Q8NGJ4 325 aa12.46□□□□□ -0.41
LITAF-208ENST00000571627 UBASH3BQ8TF42 649 aa12.46□□□□□ -0.41
LITAF-208ENST00000571627 DNAJC9Q8WXX5 260 aa12.46□□□□□ -0.41
LITAF-208ENST00000571627 C11orf40Q8WZ69 217 aa12.46□□□□□ -0.41
LITAF-208ENST00000571627 GTF3AQ92664 365 aaKnown RBP12.46□□□□□ -0.41
LITAF-208ENST00000571627 UTP4Q969X6 686 aaKnown RBP12.46□□□□□ -0.41
LITAF-208ENST00000571627 NIPSNAP1Q9BPW8 284 aa12.46□□□□□ -0.41
LITAF-208ENST00000571627 PLA2G12AQ9BZM1 189 aa12.46□□□□□ -0.41
LITAF-208ENST00000571627 RACGAP1Q9H0H5 632 aa12.46□□□□□ -0.41
LITAF-208ENST00000571627 MS4A5Q9H3V2 200 aa12.46□□□□□ -0.41
LITAF-208ENST00000571627 FN3KQ9H479 309 aa12.46□□□□□ -0.41
LITAF-208ENST00000571627 SRA1Q9HD15 236 aaKnown RBP12.46□□□□□ -0.41
LITAF-208ENST00000571627 KLHL21Q9UJP4 597 aa12.46□□□□□ -0.41
LITAF-208ENST00000571627 B9D1Q9UPM9 204 aa12.46□□□□□ -0.41
LITAF-208ENST00000571627 IGLV3-9A0A075B6K5 115 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms