RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 EPHA2P29317 976 aa11.54□□□□□ -0.56
CCDC40-205ENST00000571028 IDH3GP51553 393 aaPredicted RBP11.54□□□□□ -0.56
CCDC40-205ENST00000571028 ALDH3A2P51648 485 aa11.54□□□□□ -0.56
CCDC40-205ENST00000571028 ZNF133P52736 654 aaPredicted RBP11.54□□□□□ -0.56
CCDC40-205ENST00000571028 MRPS34P82930 218 aaKnown RBP11.54□□□□□ -0.56
CCDC40-205ENST00000571028 MEP1BQ16820 701 aa11.54□□□□□ -0.56
CCDC40-205ENST00000571028 GSG1Q2KHT4 349 aa11.54□□□□□ -0.56
CCDC40-205ENST00000571028 ZNF362Q5T0B9 420 aaPredicted RBP11.54□□□□□ -0.56
CCDC40-205ENST00000571028 PLBD1Q6P4A8 553 aa11.54□□□□□ -0.56
CCDC40-205ENST00000571028 PIAS4Q8N2W9 510 aaPredicted RBP11.54□□□□□ -0.56
CCDC40-205ENST00000571028 PARP8Q8N3A8 854 aa11.54□□□□□ -0.56
CCDC40-205ENST00000571028 PROKR2Q8NFJ6 384 aa11.54□□□□□ -0.56
CCDC40-205ENST00000571028 LILRB1Q8NHL6 650 aaPredicted RBP11.54□□□□□ -0.56
CCDC40-205ENST00000571028 NABP1Q96AH0 204 aa11.54□□□□□ -0.56
CCDC40-205ENST00000571028 RADILQ96JH8 1075 aa11.54□□□□□ -0.56
CCDC40-205ENST00000571028 GRIP2Q9C0E4 1043 aa11.54□□□□□ -0.56
CCDC40-205ENST00000571028 OR51V1Q9H2C8 321 aa11.54□□□□□ -0.56
CCDC40-205ENST00000571028 SIAEQ9HAT2 523 aa11.54□□□□□ -0.56
CCDC40-205ENST00000571028 NOX3Q9HBY0 568 aa11.54□□□□□ -0.56
CCDC40-205ENST00000571028 SLC25A19Q9HC21 320 aa11.54□□□□□ -0.56
CCDC40-205ENST00000571028 OBP2BQ9NPH6 170 aa11.54□□□□□ -0.56
CCDC40-205ENST00000571028 NKX1-2Q9UD57 310 aaPredicted RBP11.54□□□□□ -0.56
CCDC40-205ENST00000571028 POLR1DQ9Y2S0 133 aa11.54□□□□□ -0.56
CCDC40-205ENST00000571028 ROS1P08922 2347 aa11.53□□□□□ -0.56
CCDC40-205ENST00000571028 TVP23AA6NH52 213 aa11.53□□□□□ -0.56
CCDC40-205ENST00000571028 PRR23D1E9PI22 279 aaPredicted RBP11.53□□□□□ -0.56
CCDC40-205ENST00000571028 SURF4O15260 269 aa11.53□□□□□ -0.56
CCDC40-205ENST00000571028 LMX1BO60663 402 aa11.53□□□□□ -0.56
CCDC40-205ENST00000571028 UBL3O95164 117 aa11.53□□□□□ -0.56
CCDC40-205ENST00000571028 ALPLP05186 524 aa11.53□□□□□ -0.56
CCDC40-205ENST00000571028 PRR23D2P0DMB1 279 aaPredicted RBP11.53□□□□□ -0.56
CCDC40-205ENST00000571028 HOXB1P14653 301 aaPredicted RBP11.53□□□□□ -0.56
CCDC40-205ENST00000571028 CBR1P16152 277 aa11.53□□□□□ -0.56
CCDC40-205ENST00000571028 MSR1P21757 451 aa11.53□□□□□ -0.56
CCDC40-205ENST00000571028 PEX2P28328 305 aa11.53□□□□□ -0.56
CCDC40-205ENST00000571028 RAD23AP54725 363 aa11.53□□□□□ -0.56
CCDC40-205ENST00000571028 RAB1AP62820 205 aa11.53□□□□□ -0.56
CCDC40-205ENST00000571028 BSPH1Q075Z2 132 aa11.53□□□□□ -0.56
CCDC40-205ENST00000571028 LOXL1Q08397 574 aaPredicted RBP11.53□□□□□ -0.56
CCDC40-205ENST00000571028 SPOCK1Q08629 439 aa11.53□□□□□ -0.56
CCDC40-205ENST00000571028 RAB39AQ14964 217 aa11.53□□□□□ -0.56
CCDC40-205ENST00000571028 KLHL12Q53G59 568 aa11.53□□□□□ -0.56
CCDC40-205ENST00000571028 NCMAPQ5T1S8 102 aa11.53□□□□□ -0.56
CCDC40-205ENST00000571028 TMEM53Q6P2H8 277 aa11.53□□□□□ -0.56
CCDC40-205ENST00000571028 CPOQ8IVL8 374 aa11.53□□□□□ -0.56
CCDC40-205ENST00000571028 GLB1L2Q8IW92 636 aa11.53□□□□□ -0.56
CCDC40-205ENST00000571028 CCDC36Q8IYA8 594 aa11.53□□□□□ -0.56
CCDC40-205ENST00000571028 KBTBD8Q8NFY9 601 aa11.53□□□□□ -0.56
CCDC40-205ENST00000571028 OR6K6Q8NGW6 343 aa11.53□□□□□ -0.56
CCDC40-205ENST00000571028 OR2T4Q8NH00 348 aa11.53□□□□□ -0.56
CCDC40-205ENST00000571028 ZNRF4Q8WWF5 429 aa11.53□□□□□ -0.56
CCDC40-205ENST00000571028 C11orf40Q8WZ69 217 aa11.53□□□□□ -0.56
CCDC40-205ENST00000571028 NEUROG1Q92886 237 aa11.53□□□□□ -0.56
CCDC40-205ENST00000571028 SLC38A2Q96QD8 506 aa11.53□□□□□ -0.56
CCDC40-205ENST00000571028 TRAF4Q9BUZ4 470 aaPredicted RBP11.53□□□□□ -0.56
CCDC40-205ENST00000571028 ZNF416Q9BWM5 594 aa11.53□□□□□ -0.56
CCDC40-205ENST00000571028 HCAR1Q9BXC0 346 aa11.53□□□□□ -0.56
CCDC40-205ENST00000571028 DCLRE1BQ9H816 532 aa11.53□□□□□ -0.56
CCDC40-205ENST00000571028 CHODLQ9H9P2 273 aa11.53□□□□□ -0.56
CCDC40-205ENST00000571028 POLE4Q9NR33 117 aa11.53□□□□□ -0.56
CCDC40-205ENST00000571028 CMC2Q9NRP2 79 aa11.53□□□□□ -0.56
CCDC40-205ENST00000571028 USE1Q9NZ43 259 aa11.53□□□□□ -0.56
CCDC40-205ENST00000571028 ENOPH1Q9UHY7 261 aa11.53□□□□□ -0.56
CCDC40-205ENST00000571028 KCNS2Q9ULS6 477 aa11.53□□□□□ -0.56
CCDC40-205ENST00000571028 FKBP7Q9Y680 259 aa11.53□□□□□ -0.56
CCDC40-205ENST00000571028 CR1P17927 2039 aa11.53□□□□□ -0.56
CCDC40-205ENST00000571028 IGLV1-36A0A0B4J1U3 117 aa11.52□□□□□ -0.57
CCDC40-205ENST00000571028 IGHV1-18A0A0C4DH31 117 aa11.52□□□□□ -0.57
CCDC40-205ENST00000571028 ZAR1LA6NP61 321 aa11.52□□□□□ -0.57
CCDC40-205ENST00000571028 ABCD4O14678 606 aa11.52□□□□□ -0.57
CCDC40-205ENST00000571028 SLC25A16P16260 332 aa11.52□□□□□ -0.57
CCDC40-205ENST00000571028 SPI1P17947 270 aa11.52□□□□□ -0.57
CCDC40-205ENST00000571028 PAICSP22234 425 aaKnown RBP11.52□□□□□ -0.57
CCDC40-205ENST00000571028 ARR3P36575 388 aa11.52□□□□□ -0.57
CCDC40-205ENST00000571028 RPS7P62081 194 aaKnown RBP11.52□□□□□ -0.57
CCDC40-205ENST00000571028 HSF2Q03933 536 aa11.52□□□□□ -0.57
CCDC40-205ENST00000571028 ENDOGQ14249 297 aaKnown RBP11.52□□□□□ -0.57
CCDC40-205ENST00000571028 SLC36A2Q495M3 483 aa11.52□□□□□ -0.57
CCDC40-205ENST00000571028 FAM27BQ5VT28 67 aa11.52□□□□□ -0.57
CCDC40-205ENST00000571028 SLX4IPQ5VYV7 408 aa11.52□□□□□ -0.57
CCDC40-205ENST00000571028 SLC22A25Q6T423 547 aa11.52□□□□□ -0.57
CCDC40-205ENST00000571028 LYPD4Q6UWN0 246 aa11.52□□□□□ -0.57
CCDC40-205ENST00000571028 SEZ6L2Q6UXD5 910 aa11.52□□□□□ -0.57
CCDC40-205ENST00000571028 TMEM108Q6UXF1 575 aa11.52□□□□□ -0.57
CCDC40-205ENST00000571028 C12orf54Q6X4T0 127 aa11.52□□□□□ -0.57
CCDC40-205ENST00000571028 B3GLCTQ6Y288 498 aa11.52□□□□□ -0.57
CCDC40-205ENST00000571028 ZNF627Q7L945 461 aa11.52□□□□□ -0.57
CCDC40-205ENST00000571028 OR10H5Q8NGA6 315 aa11.52□□□□□ -0.57
CCDC40-205ENST00000571028 AKR7LQ8NHP1 331 aa11.52□□□□□ -0.57
CCDC40-205ENST00000571028 FBXO17Q96EF6 278 aa11.52□□□□□ -0.57
CCDC40-205ENST00000571028 MS4A3Q96HJ5 214 aa11.52□□□□□ -0.57
CCDC40-205ENST00000571028 SNX18Q96RF0 628 aa11.52□□□□□ -0.57
CCDC40-205ENST00000571028 IL4I1Q96RQ9 567 aa11.52□□□□□ -0.57
CCDC40-205ENST00000571028 DDOQ99489 341 aa11.52□□□□□ -0.57
CCDC40-205ENST00000571028 KCNS3Q9BQ31 491 aa11.52□□□□□ -0.57
CCDC40-205ENST00000571028 TOR3AQ9H497 397 aa11.52□□□□□ -0.57
CCDC40-205ENST00000571028 CISD1Q9NZ45 108 aaKnown RBP11.52□□□□□ -0.57
CCDC40-205ENST00000571028 ZNF224Q9NZL3 707 aa11.52□□□□□ -0.57
CCDC40-205ENST00000571028 POU2F3Q9UKI9 436 aa11.52□□□□□ -0.57
CCDC40-205ENST00000571028 MOKQ9UQ07 419 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms