RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 UBR5O95071 2799 aaPredicted RBP3.33□□□□□ -1.88
NUP88-202ENST00000570937 DOCK10Q96BY6 2186 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 A0A087WZY1 265 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 GOLGA8QA0A0J9YX86 632 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 A0A1W2PQD3 144 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 PINLYPA6NC86 204 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 GOLGA8OA6NCC3 632 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 MPTX1A8MV57 137 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 KRTAP9-6A8MVA2 160 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 E9PBE3 544 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 GOLGA8NF8WBI6 632 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 TRIM77I1YAP6 450 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 SDHDO14521 159 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 RFXANKO14593 260 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 ATP8B1O43520 1251 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 FADS1O60427 444 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 STX11O75558 287 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 KRT75O95678 551 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 ANGPTL1O95841 491 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 C6orf47O95873 294 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 UQCRC2P22695 453 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 SRD5A2P31213 254 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 EVI2BP34910 448 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 PEX19P40855 299 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 EIF1P41567 113 aaKnown RBP3.32□□□□□ -1.88
NUP88-202ENST00000570937 CDK9P50750 372 aaKnown RBP3.32□□□□□ -1.88
NUP88-202ENST00000570937 ZNF41P51814 821 aaPredicted RBP3.32□□□□□ -1.88
NUP88-202ENST00000570937 DSCR4P56555 118 aaPredicted RBP3.32□□□□□ -1.88
NUP88-202ENST00000570937 DSCR10P59022 87 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 CSNK2BP67870 215 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 HBA1P69905 142 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 HPCAP84074 193 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 SNTB1Q13884 538 aaKnown RBP3.32□□□□□ -1.88
NUP88-202ENST00000570937 RCAN2Q14206 197 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 GNA13Q14344 377 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 BCL2A1Q16548 175 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 C3AR1Q16581 482 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 FAM174BQ3ZCQ3 159 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 GLYR1Q49A26 553 aaPredicted RBP3.32□□□□□ -1.88
NUP88-202ENST00000570937 NHSL2Q5HYW2 709 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 METTL21CQ5VZV1 264 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 CES4AQ5XG92 561 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 OR4F3Q6IEY1 312 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 EPGNQ6UW88 154 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 ZNF621Q6ZSS3 439 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 MSANTD1Q6ZTZ1 278 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 C16orf62Q7Z3J2 963 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 C6orf120Q7Z4R8 191 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 IFNEQ86WN2 208 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 DOLPP1Q86YN1 238 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 MMD2Q8IY49 270 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 PRR22Q8IZ63 422 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 FAM83FQ8NEG4 500 aaPredicted RBP3.32□□□□□ -1.88
NUP88-202ENST00000570937 OR4K17Q8NGC6 315 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 OR10Q1Q8NGQ4 319 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 ZNF519Q8TB69 540 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 PIK3R3Q92569 461 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 HGDQ93099 445 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 MOB3AQ96BX8 217 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 RMND5BQ96G75 393 aaPredicted RBP3.32□□□□□ -1.88
NUP88-202ENST00000570937 C16orf58Q96GQ5 468 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 ITCHQ96J02 903 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 CCDC115Q96NT0 180 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 PIGQQ9BRB3 760 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 CCDC28BQ9BUN5 200 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 PIGUQ9H490 435 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 ARMC7Q9H6L4 198 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 ANKRA2Q9H9E1 313 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 CACYBPQ9HB71 228 aaKnown RBP3.32□□□□□ -1.88
NUP88-202ENST00000570937 PROK2Q9HC23 129 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 KCNJ16Q9NPI9 418 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 AIG1Q9NVV5 245 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 PAQR5Q9NXK6 330 aaPredicted RBP3.32□□□□□ -1.88
NUP88-202ENST00000570937 CALML5Q9NZT1 146 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 GIMAP2Q9UG22 337 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 BTNL2Q9UIR0 455 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 LIPT1Q9Y234 373 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 TMED3Q9Y3Q3 217 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 KLF2Q9Y5W3 355 aaPredicted RBP3.32□□□□□ -1.88
NUP88-202ENST00000570937 WIF1Q9Y5W5 379 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 USH1CQ9Y6N9 552 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 CPAMD8Q8IZJ3 1885 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 TENM4Q6N022 2769 aa3.32□□□□□ -1.88
NUP88-202ENST00000570937 HELZ2Q9BYK8 2649 aaKnown RBP3.31□□□□□ -1.88
NUP88-202ENST00000570937 FASNP49327 2511 aaKnown RBP3.31□□□□□ -1.88
NUP88-202ENST00000570937 CNTRLQ7Z7A1 2325 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 BSNQ9UPA5 3926 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 A0A0G2JMM0 328 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 RNF103-CHMP3A0A140T963 221 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 A0A1W2PPB8 328 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 A0A1W2PRS3 328 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 GJE1A6NN92 205 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 VGLL3A8MV65 326 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 KIR3DP1A8MWS1 328 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 H0YAE9 185 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 SCO2O43819 266 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 KCNK2O95069 426 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 UTS2O95399 124 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 CPSF4O95639 269 aaKnown RBP3.31□□□□□ -1.88
NUP88-202ENST00000570937 NUDT14O95848 222 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms