RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 DIMT1Q9UNQ2 313 aaKnown RBP5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 ERGIC3Q9Y282 383 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 AMDHD2Q9Y303 409 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 UGT2A1Q9Y4X1 527 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 MAP1BP46821 2468 aaKnown RBP5.77□□□□□ -1.48
CTDNEP1-204ENST00000570484 HEATR5AQ86XA9 2040 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 MGAQ8IWI9 3026 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 A0A087WXM4 84 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 IQCMA0A1B0GVH7 501 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 SGCEO43556 437 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 MRPS14O60783 128 aaKnown RBP5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 AGFG2O95081 481 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 MPZL1O95297 269 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 CGAP01215 116 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 TFP02787 698 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 MT-ND2P03891 347 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 CDK1P06493 297 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 RPSAP08865 295 aaKnown RBP5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 OR2T7P0C7T2 308 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 PSMB1P20618 241 aaKnown RBP5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 ARR3P36575 388 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 RPS27P42677 84 aaKnown RBP5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 SLC15A1P46059 708 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 HTR5AP47898 357 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 SLC35A2P78381 396 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 ADORA2A-AS1P86434 159 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 MVKQ03426 396 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 RAB35Q15286 201 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 KCNMB1Q16558 191 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 GSG1Q2KHT4 349 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 ZNF829Q3KNS6 432 aaPredicted RBP5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 HIKESHIQ53FT3 197 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 SFRP5Q5T4F7 317 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 FAM27BQ5VT28 67 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 OTPQ5XKR4 325 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 ZNF773Q6PK81 442 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 ZNF322Q6U7Q0 402 aaPredicted RBP5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 PLEKHG7Q6ZR37 379 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 SPATC1Q76KD6 591 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 LINGO2Q7L985 606 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 SSX8Q7RTT4 187 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 PRSS48Q7RTY5 328 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 DCXRQ7Z4W1 244 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 CDC20BQ86Y33 519 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 GABRG1Q8N1C3 465 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 KLHL36Q8N4N3 616 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 ZNF808Q8N4W9 903 aaPredicted RBP5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 ZNF433Q8N7K0 673 aaPredicted RBP5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 GJC3Q8NFK1 279 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 TSPAN14Q8NG11 270 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 OR2T27Q8NH04 317 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 OR52N5Q8NH56 324 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 OTOSQ8NHW6 89 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 GGHQ92820 318 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 NABP1Q96AH0 204 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 MUCL1Q96DR8 90 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 DDOQ99489 341 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 ATF6BQ99941 703 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 SH3GL3Q99963 347 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 KCNS3Q9BQ31 491 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 RHNO1Q9BSD3 238 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 WACQ9BTA9 647 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 MED18Q9BUE0 208 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 ALG8Q9BVK2 526 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 MROQ9BYG7 248 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 ACTR6Q9GZN1 396 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 HDHD2Q9H0R4 259 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 C1orf198Q9H425 327 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 ZNF696Q9H7X3 374 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 MARCH7Q9H992 704 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 TRIM36Q9NQ86 728 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 CENPMQ9NSP4 180 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 MRPL22Q9NWU5 206 aaKnown RBP5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 SCOCQ9UIL1 159 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 GNG8Q9UK08 70 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 GTF2A1LQ9UNN4 478 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 PCDHGB5Q9Y5G0 923 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 TIMM10BQ9Y5J6 103 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 LAMA5O15230 3695 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 CACNA1GO43497 2377 aa5.77□□□□□ -1.49
CTDNEP1-204ENST00000570484 ZZEF1O43149 2961 aa5.76□□□□□ -1.49
CTDNEP1-204ENST00000570484 ARPC4-TTLL3A0A0A6YYG9 625 aa5.76□□□□□ -1.49
CTDNEP1-204ENST00000570484 A0A1W2PQL4 384 aaPredicted RBP5.76□□□□□ -1.49
CTDNEP1-204ENST00000570484 NKX2-6A6NCS4 301 aa5.76□□□□□ -1.49
CTDNEP1-204ENST00000570484 OR5H1A6NKK0 313 aa5.76□□□□□ -1.49
CTDNEP1-204ENST00000570484 A8MXE2 369 aa5.76□□□□□ -1.49
CTDNEP1-204ENST00000570484 C16orf97H3BN30 126 aa5.76□□□□□ -1.49
CTDNEP1-204ENST00000570484 ZG16O60844 167 aa5.76□□□□□ -1.49
CTDNEP1-204ENST00000570484 CLDN14O95500 239 aa5.76□□□□□ -1.49
CTDNEP1-204ENST00000570484 PTHP01270 115 aa5.76□□□□□ -1.49
CTDNEP1-204ENST00000570484 IGHA1P01876 353 aa5.76□□□□□ -1.49
CTDNEP1-204ENST00000570484 HLA-HP01893 362 aa5.76□□□□□ -1.49
CTDNEP1-204ENST00000570484 MT-ND5P03915 603 aa5.76□□□□□ -1.49
CTDNEP1-204ENST00000570484 TACSTD2P09758 323 aa5.76□□□□□ -1.49
CTDNEP1-204ENST00000570484 H2BFMP0C1H6 154 aa5.76□□□□□ -1.49
CTDNEP1-204ENST00000570484 ATP6V1B1P15313 513 aa5.76□□□□□ -1.49
CTDNEP1-204ENST00000570484 PPP3CBP16298 524 aa5.76□□□□□ -1.49
CTDNEP1-204ENST00000570484 ZNF32P17041 273 aa5.76□□□□□ -1.49
CTDNEP1-204ENST00000570484 AGAP20933 346 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms