RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 DOCK11Q5JSL3 2073 aa7.26□□□□□ -1.25
CTDNEP1-203ENST00000570385 TANC2Q9HCD6 1990 aa7.26□□□□□ -1.25
CTDNEP1-203ENST00000570385 GMNCA6NCL1 334 aa7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 A6NIZ1 184 aa7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 NPIPB13A6NJU9 1138 aa7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 C12orf71A8MTZ7 269 aa7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 HMGB1P1B2RPK0 211 aaPredicted RBP7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 NPIPB4C9JG80 1138 aa7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 IMPA2O14732 288 aa7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 FFAR1O14842 300 aa7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 DOK2O60496 412 aa7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 ZNF682O95780 498 aa7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 IGF2P01344 180 aa7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 IGHMP01871 453 aa7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 CD55P08174 381 aa7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 ADH4P08319 380 aa7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 THRBP10828 461 aa7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 NR2C1P13056 603 aa7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 ZNF26P17031 533 aaPredicted RBP7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 GSTM3P21266 225 aa7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 GATA3P23771 443 aa7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 LIPAP38571 399 aa7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 SLC9A3P48764 834 aa7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 RAP1BP61224 184 aa7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 RAP1AP62834 184 aa7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 SELENOWP63302 87 aa7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 DBPQ10586 325 aaPredicted RBP7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 ZNF154Q13106 437 aa7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 CDK5R2Q13319 367 aa7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 FHL1Q13642 323 aa7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 HLXQ14774 488 aaPredicted RBP7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 ZMYND11Q15326 602 aa7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 KLF17Q5JT82 389 aaPredicted RBP7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 METTL21CQ5VZV1 264 aa7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 ZNF730Q6ZMV8 503 aa7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 FOXL2NBQ6ZUU3 175 aa7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 KLHL36Q8N4N3 616 aa7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 ATG16L2Q8NAA4 619 aa7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 OR2T12Q8NG77 320 aa7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 STON2Q8WXE9 905 aa7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 ZNF48Q96MX3 618 aaPredicted RBP7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 DIRC2Q96SL1 478 aa7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 FNDC11Q9BVV2 318 aa7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 POLR2J2Q9GZM3 115 aaKnown RBP7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 POLR2J3Q9H1A7 115 aaKnown RBP7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 PATZ1Q9HBE1 687 aaKnown RBP7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 SAR1AQ9NR31 198 aa7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 MAN2C1Q9NTJ4 1040 aa7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 GRHPRQ9UBQ7 328 aa7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 NUP50Q9UKX7 468 aa7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 NDRG4Q9ULP0 352 aaKnown RBP7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 AUP1Q9Y679 476 aa7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 WNK1Q9H4A3 2382 aa7.25□□□□□ -1.25
CTDNEP1-203ENST00000570385 A0A087WUU8 490 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 ELOVL7A1L3X0 281 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 DNAJC9-AS1A6NH13 148 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 FAM220BPB1ANY3 271 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 XKRYO14609 159 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 CDC42EP2O14613 210 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 TMPRSS2O15393 492 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 SGCEO43556 437 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 GPANK1O95872 356 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 CYB5R3P00387 301 aaPredicted RBP7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 IFNW1P05000 195 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 DBHP09172 617 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 IGHV4-38-2P0DP08 117 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 CTLA4P16410 223 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 TNFSF4P23510 183 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 PRTN3P24158 256 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 IFNA8P32881 189 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 SLC6A9P48067 706 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 PRSS12P56730 875 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 BTG1P62324 171 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 PRKCDQ05655 676 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 SCRN3Q0VDG4 424 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 BAMBIQ13145 260 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 TRAM2Q15035 370 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 MESTQ5EB52 335 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 ZMAT1Q5H9K5 638 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 FAM201AQ5SY85 155 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 FAM205BPQ63HN1 556 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 OR2T2Q6IF00 324 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 ARL9Q6T311 187 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 VASH1Q7L8A9 365 aaPredicted RBP7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 ZER1Q7Z7L7 766 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 LRRC28Q86X40 367 aaPredicted RBP7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 OFCC1Q8IZS5 231 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 SPICQ8N5J4 248 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 POU5F2Q8N7G0 328 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 ZNF283Q8N7M2 679 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 OR10AD1Q8NGE0 317 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 ZNF420Q8TAQ5 688 aaPredicted RBP7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 RCN3Q96D15 328 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 RASD2Q96D21 266 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 C1orf147Q96MC9 270 aaPredicted RBP7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 OR2V2Q96R30 315 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 SIGLEC11Q96RL6 698 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 SIKE1Q9BRV8 207 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 WDR76Q9H967 626 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 NTN4Q9HB63 628 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms