RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 MEIOBQ8N635 442 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 CADM4Q8NFZ8 388 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 OR4D10Q8NGI6 311 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 OR56B4Q8NH76 319 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 C4orf45Q96LM5 186 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 OR2M2Q96R28 347 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 ABHD6Q9BV23 337 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 APMAPQ9HDC9 416 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 ZFP64Q9NPA5 681 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 PPIEQ9UNP9 301 aaKnown RBP7.87□□□□□ -1.15
LINC00558-201ENST00000569422 DHDHQ9UQ10 334 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 PCNX3Q9H6A9 2034 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 IGKV1D-43A0A0B4J1Z2 117 aa7.86□□□□□ -1.15
LINC00558-201ENST00000569422 TRBV11-1A0A0K0K1C0 115 aa7.86□□□□□ -1.15
LINC00558-201ENST00000569422 TMEM212A6NML5 194 aa7.86□□□□□ -1.15
LINC00558-201ENST00000569422 LMX1BO60663 402 aa7.86□□□□□ -1.15
LINC00558-201ENST00000569422 SIX6O95475 246 aa7.86□□□□□ -1.15
LINC00558-201ENST00000569422 ALDOBP05062 364 aa7.86□□□□□ -1.15
LINC00558-201ENST00000569422 ZNF823P16415 610 aa7.86□□□□□ -1.15
LINC00558-201ENST00000569422 PNLIPRP2P54317 469 aa7.86□□□□□ -1.15
LINC00558-201ENST00000569422 SLC17A1Q14916 467 aa7.86□□□□□ -1.15
LINC00558-201ENST00000569422 SGCBQ16585 318 aa7.86□□□□□ -1.15
LINC00558-201ENST00000569422 EMC4Q5J8M3 183 aa7.86□□□□□ -1.15
LINC00558-201ENST00000569422 DEGS2Q6QHC5 323 aa7.86□□□□□ -1.15
LINC00558-201ENST00000569422 GRINAQ7Z429 371 aa7.86□□□□□ -1.15
LINC00558-201ENST00000569422 FGD2Q7Z6J4 655 aa7.86□□□□□ -1.15
LINC00558-201ENST00000569422 OR51A2Q8NGJ7 313 aa7.86□□□□□ -1.15
LINC00558-201ENST00000569422 LIPHQ8WWY8 451 aa7.86□□□□□ -1.15
LINC00558-201ENST00000569422 HAVCR1Q96D42 359 aa7.86□□□□□ -1.15
LINC00558-201ENST00000569422 MVB12AQ96EY5 273 aa7.86□□□□□ -1.15
LINC00558-201ENST00000569422 MSRB2Q9Y3D2 182 aa7.86□□□□□ -1.15
LINC00558-201ENST00000569422 LOC100509620A0A075B734 347 aa7.86□□□□□ -1.15
LINC00558-201ENST00000569422 LOC101059948A0A1B0GTJ6 334 aa7.86□□□□□ -1.15
LINC00558-201ENST00000569422 A0A1B0GTQ1 180 aa7.86□□□□□ -1.15
LINC00558-201ENST00000569422 SLC22A23A1A5C7 686 aa7.86□□□□□ -1.15
LINC00558-201ENST00000569422 C7orf66A4D0T2 115 aa7.86□□□□□ -1.15
LINC00558-201ENST00000569422 CENPBD1B2RD01 187 aa7.86□□□□□ -1.15
LINC00558-201ENST00000569422 NPIPA5E9PKD4 350 aa7.86□□□□□ -1.15
LINC00558-201ENST00000569422 PLPP3O14495 311 aa7.86□□□□□ -1.15
LINC00558-201ENST00000569422 EIF4E2O60573 245 aaKnown RBP7.86□□□□□ -1.15
LINC00558-201ENST00000569422 TXNDC12O95881 172 aa7.86□□□□□ -1.15
LINC00558-201ENST00000569422 C2orf76Q3KRA6 126 aa7.86□□□□□ -1.15
LINC00558-201ENST00000569422 PTCRAQ6ISU1 281 aaPredicted RBP7.86□□□□□ -1.15
LINC00558-201ENST00000569422 TMEM205Q6UW68 189 aa7.86□□□□□ -1.15
LINC00558-201ENST00000569422 ZNF782Q6ZMW2 699 aaPredicted RBP7.86□□□□□ -1.15
LINC00558-201ENST00000569422 DCXRQ7Z4W1 244 aa7.86□□□□□ -1.15
LINC00558-201ENST00000569422 MIB2Q96AX9 1013 aa7.86□□□□□ -1.15
LINC00558-201ENST00000569422 CCDC74BQ96LY2 380 aa7.86□□□□□ -1.15
LINC00558-201ENST00000569422 OR8B4Q96RC9 309 aa7.86□□□□□ -1.15
LINC00558-201ENST00000569422 TXNIPQ9H3M7 391 aa7.86□□□□□ -1.15
LINC00558-201ENST00000569422 SEC61A2Q9H9S3 476 aa7.86□□□□□ -1.15
LINC00558-201ENST00000569422 TAS2R4Q9NYW5 299 aa7.86□□□□□ -1.15
LINC00558-201ENST00000569422 MGAT4CQ9UBM8 478 aa7.86□□□□□ -1.15
LINC00558-201ENST00000569422 STEAP1Q9UHE8 339 aa7.86□□□□□ -1.15
LINC00558-201ENST00000569422 CYB5R1Q9UHQ9 305 aa7.86□□□□□ -1.15
LINC00558-201ENST00000569422 ELF5Q9UKW6 265 aaPredicted RBP7.86□□□□□ -1.15
LINC00558-201ENST00000569422 NPIPA1Q9UND3 350 aa7.86□□□□□ -1.15
LINC00558-201ENST00000569422 LRP12Q9Y561 859 aa7.86□□□□□ -1.15
LINC00558-201ENST00000569422 PCDHGA5Q9Y5G8 931 aa7.86□□□□□ -1.15
LINC00558-201ENST00000569422 PCDHGA1Q9Y5H4 931 aa7.86□□□□□ -1.15
LINC00558-201ENST00000569422 HRH3Q9Y5N1 445 aa7.86□□□□□ -1.15
LINC00558-201ENST00000569422 GATCO43716 136 aaKnown RBP7.85□□□□□ -1.15
LINC00558-201ENST00000569422 SCRG1O75711 98 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 PLATP00750 562 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 RIDAP52758 137 aaKnown RBP7.85□□□□□ -1.15
LINC00558-201ENST00000569422 EPHA4P54764 986 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 ZP1P60852 638 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 TSPAN5P62079 268 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 TLE3Q04726 772 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 EGR3Q06889 387 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 RASGEF1BQ0VAM2 473 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 NKAIN1Q4KMZ8 207 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 GLYATL3Q5SZD4 288 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 CD276Q5ZPR3 534 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.85□□□□□ -1.15
LINC00558-201ENST00000569422 ZNF679Q8IYX0 411 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 SLC25A44Q96H78 314 aaPredicted RBP7.85□□□□□ -1.15
LINC00558-201ENST00000569422 SLC41A2Q96JW4 573 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 CMKLR1Q99788 373 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.85□□□□□ -1.15
LINC00558-201ENST00000569422 COPZ2Q9P299 210 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 A0A1W2PNR3 127 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 SLC25A17O43808 307 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 FADS1O60427 444 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 ALX3O95076 343 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 HRGP04196 525 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 GIMD1P0DJR0 217 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 GTF2F2P13984 249 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 SFTPDP35247 375 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 DNASE1L1P49184 302 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 AP3S2P59780 193 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 GLO1Q04760 184 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 PUDPQ08623 228 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 FOXF1Q12946 379 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 DYRK1AQ13627 763 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 POU4F3Q15319 338 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 PHF19Q5T6S3 580 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 PRAMEF20Q5VT98 475 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 BAIAP2L2Q6UXY1 529 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 COX15Q7KZN9 410 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms