RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-209ENST00000569243 BPIFCQ8NFQ6 507 aa1.33□□□□□ -2.2
UBR1-209ENST00000569243 C15orf40Q8WUR7 153 aa1.33□□□□□ -2.2
UBR1-209ENST00000569243 ANP32BQ92688 251 aaKnown RBP1.33□□□□□ -2.2
UBR1-209ENST00000569243 ITFG2Q969R8 447 aa1.33□□□□□ -2.2
UBR1-209ENST00000569243 TPD52L3Q96J77 140 aa1.33□□□□□ -2.2
UBR1-209ENST00000569243 ZNF681Q96N22 645 aa1.33□□□□□ -2.2
UBR1-209ENST00000569243 RPRD1AQ96P16 312 aaPredicted RBP1.33□□□□□ -2.2
UBR1-209ENST00000569243 PANX2Q96RD6 677 aa1.33□□□□□ -2.2
UBR1-209ENST00000569243 RHOXF2Q9BQY4 288 aa1.33□□□□□ -2.2
UBR1-209ENST00000569243 BBS2Q9BXC9 721 aa1.33□□□□□ -2.2
UBR1-209ENST00000569243 TMEM59Q9BXS4 323 aa1.33□□□□□ -2.2
UBR1-209ENST00000569243 STMN4Q9H169 189 aaPredicted RBP1.33□□□□□ -2.2
UBR1-209ENST00000569243 HAUS4Q9H6D7 363 aa1.33□□□□□ -2.2
UBR1-209ENST00000569243 ANKRA2Q9H9E1 313 aa1.33□□□□□ -2.2
UBR1-209ENST00000569243 COMMD3-BMI1R4GMX3 469 aa1.33□□□□□ -2.2
UBR1-209ENST00000569243 CDHR2Q9BYE9 1310 aa1.33□□□□□ -2.2
UBR1-209ENST00000569243 AHDC1Q5TGY3 1603 aaPredicted RBP1.33□□□□□ -2.2
UBR1-209ENST00000569243 TNS2Q63HR2 1409 aa1.32□□□□□ -2.2
UBR1-209ENST00000569243 A0A1B0GTQ1 180 aa1.32□□□□□ -2.2
UBR1-209ENST00000569243 METTL21EPA6NDL7 271 aa1.32□□□□□ -2.2
UBR1-209ENST00000569243 SUPT3HB4E1H0 165 aa1.32□□□□□ -2.2
UBR1-209ENST00000569243 ARPC3O15145 178 aa1.32□□□□□ -2.2
UBR1-209ENST00000569243 CETN3O15182 167 aa1.32□□□□□ -2.2
UBR1-209ENST00000569243 CASC3O15234 703 aaKnown RBP1.32□□□□□ -2.2
UBR1-209ENST00000569243 RNF13O43567 381 aa1.32□□□□□ -2.2
UBR1-209ENST00000569243 SPOPO43791 374 aa1.32□□□□□ -2.2
UBR1-209ENST00000569243 FCMRO60667 390 aa1.32□□□□□ -2.2
UBR1-209ENST00000569243 TOM1O60784 492 aa1.32□□□□□ -2.2
UBR1-209ENST00000569243 E2F6O75461 281 aa1.32□□□□□ -2.2
UBR1-209ENST00000569243 GCM2O75603 506 aaPredicted RBP1.32□□□□□ -2.2
UBR1-209ENST00000569243 RAB3DO95716 219 aa1.32□□□□□ -2.2
UBR1-209ENST00000569243 RALBP11234 206 aa1.32□□□□□ -2.2
UBR1-209ENST00000569243 CHMLP26374 656 aa1.32□□□□□ -2.2
UBR1-209ENST00000569243 ATP5C1P36542 298 aaKnown RBP1.32□□□□□ -2.2
UBR1-209ENST00000569243 NUP62P37198 522 aaPredicted RBP1.32□□□□□ -2.2
UBR1-209ENST00000569243 VHLP40337 213 aa1.32□□□□□ -2.2
UBR1-209ENST00000569243 GRIA1P42261 906 aa1.32□□□□□ -2.2
UBR1-209ENST00000569243 SYKP43405 635 aa1.32□□□□□ -2.2
UBR1-209ENST00000569243 CDK16Q00536 496 aa1.32□□□□□ -2.2
UBR1-209ENST00000569243 TCP10Q12799 353 aa1.32□□□□□ -2.2
UBR1-209ENST00000569243 SYCP1Q15431 976 aa1.32□□□□□ -2.2
UBR1-209ENST00000569243 HIKESHIQ53FT3 197 aa1.32□□□□□ -2.2
UBR1-209ENST00000569243 UQCC3Q6UW78 93 aa1.32□□□□□ -2.2
UBR1-209ENST00000569243 NANOGNBQ7Z5D8 188 aa1.32□□□□□ -2.2
UBR1-209ENST00000569243 UBE2J2Q8N2K1 259 aa1.32□□□□□ -2.2
UBR1-209ENST00000569243 RAB3IL1Q8TBN0 382 aa1.32□□□□□ -2.2
UBR1-209ENST00000569243 RASD2Q96D21 266 aa1.32□□□□□ -2.2
UBR1-209ENST00000569243 LRRC39Q96DD0 335 aa1.32□□□□□ -2.2
UBR1-209ENST00000569243 SEH1LQ96EE3 360 aa1.32□□□□□ -2.2
UBR1-209ENST00000569243 SLC41A3Q96GZ6 507 aa1.32□□□□□ -2.2
UBR1-209ENST00000569243 COQ2Q96H96 371 aa1.32□□□□□ -2.2
UBR1-209ENST00000569243 ATP6V1G3Q96LB4 118 aa1.32□□□□□ -2.2
UBR1-209ENST00000569243 SLC38A2Q96QD8 506 aa1.32□□□□□ -2.2
UBR1-209ENST00000569243 OR8B4Q96RC9 309 aa1.32□□□□□ -2.2
UBR1-209ENST00000569243 CAMK2N2Q96S95 79 aa1.32□□□□□ -2.2
UBR1-209ENST00000569243 PLIN2Q99541 437 aa1.32□□□□□ -2.2
UBR1-209ENST00000569243 C11orf70Q9BRQ4 267 aa1.32□□□□□ -2.2
UBR1-209ENST00000569243 LLPHQ9BRT6 129 aaKnown RBP1.32□□□□□ -2.2
UBR1-209ENST00000569243 MTG1Q9BT17 334 aaPredicted RBP1.32□□□□□ -2.2
UBR1-209ENST00000569243 NUP58Q9BVL2 599 aa1.32□□□□□ -2.2
UBR1-209ENST00000569243 SLC25A2Q9BXI2 301 aa1.32□□□□□ -2.2
UBR1-209ENST00000569243 MFFQ9GZY8 342 aa1.32□□□□□ -2.2
UBR1-209ENST00000569243 SAV1Q9H4B6 383 aaPredicted RBP1.32□□□□□ -2.2
UBR1-209ENST00000569243 XKR8Q9H6D3 395 aa1.32□□□□□ -2.2
UBR1-209ENST00000569243 FN3KRPQ9HA64 309 aa1.32□□□□□ -2.2
UBR1-209ENST00000569243 CYP3A43Q9HB55 503 aa1.32□□□□□ -2.2
UBR1-209ENST00000569243 MCCC2Q9HCC0 563 aa1.32□□□□□ -2.2
UBR1-209ENST00000569243 PDP1Q9P0J1 537 aaPredicted RBP1.32□□□□□ -2.2
UBR1-209ENST00000569243 PISDQ9UG56 409 aa1.32□□□□□ -2.2
UBR1-209ENST00000569243 UBIAD1Q9Y5Z9 338 aa1.32□□□□□ -2.2
UBR1-209ENST00000569243 BRD4O60885 1362 aaPredicted RBP1.32□□□□□ -2.2
UBR1-209ENST00000569243 AKNAQ7Z591 1439 aa1.32□□□□□ -2.2
UBR1-209ENST00000569243 KIF27Q86VH2 1401 aa1.32□□□□□ -2.2
UBR1-209ENST00000569243 TENM1Q9UKZ4 2725 aa1.31□□□□□ -2.2
UBR1-209ENST00000569243 ATP10AO60312 1499 aa1.31□□□□□ -2.2
UBR1-209ENST00000569243 LTBP4Q8N2S1 1624 aa1.31□□□□□ -2.2
UBR1-209ENST00000569243 LOC100506127A0A0U1RQW1 187 aa1.31□□□□□ -2.2
UBR1-209ENST00000569243 A0A1B0GVL5 298 aa1.31□□□□□ -2.2
UBR1-209ENST00000569243 CIB4A0PJX0 185 aa1.31□□□□□ -2.2
UBR1-209ENST00000569243 OR6C74A6NCV1 312 aa1.31□□□□□ -2.2
UBR1-209ENST00000569243 VGLL3A8MV65 326 aa1.31□□□□□ -2.2
UBR1-209ENST00000569243 SPECC1L-ADORA2AF8WAN1 911 aa1.31□□□□□ -2.2
UBR1-209ENST00000569243 NDUFS8O00217 210 aa1.31□□□□□ -2.2
UBR1-209ENST00000569243 LSM1O15116 133 aaKnown RBP1.31□□□□□ -2.2
UBR1-209ENST00000569243 EIF3HO15372 352 aaKnown RBP eCLIP1.31□□□□□ -2.2
UBR1-209ENST00000569243 CLPXO76031 633 aa1.31□□□□□ -2.2
UBR1-209ENST00000569243 RHOBTB1O94844 696 aa1.31□□□□□ -2.2
UBR1-209ENST00000569243 CLDN9O95484 217 aa1.31□□□□□ -2.2
UBR1-209ENST00000569243 TGM6O95932 706 aa1.31□□□□□ -2.2
UBR1-209ENST00000569243 KRT14P02533 472 aa1.31□□□□□ -2.2
UBR1-209ENST00000569243 APCSP02743 223 aa1.31□□□□□ -2.2
UBR1-209ENST00000569243 OR56A5P0C7T3 313 aa1.31□□□□□ -2.2
UBR1-209ENST00000569243 CCDC172P0C7W6 258 aa1.31□□□□□ -2.2
UBR1-209ENST00000569243 CPN2P22792 545 aa1.31□□□□□ -2.2
UBR1-209ENST00000569243 HNRNPH3P31942 346 aaKnown RBP1.31□□□□□ -2.2
UBR1-209ENST00000569243 HRH1P35367 487 aa1.31□□□□□ -2.2
UBR1-209ENST00000569243 SERPINB5P36952 375 aa1.31□□□□□ -2.2
UBR1-209ENST00000569243 AQP2P41181 271 aa1.31□□□□□ -2.2
UBR1-209ENST00000569243 CDKN2BP42772 138 aa1.31□□□□□ -2.2
UBR1-209ENST00000569243 CDKN1BP46527 198 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms