RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 TLX2O43763 284 aaPredicted RBP10.55□□□□□ -0.72
SF3B3-208ENST00000567250 RRP9O43818 475 aaKnown RBP10.55□□□□□ -0.72
SF3B3-208ENST00000567250 PRKYO43930 277 aa10.55□□□□□ -0.72
SF3B3-208ENST00000567250 MPZL1O95297 269 aa10.55□□□□□ -0.72
SF3B3-208ENST00000567250 PLAUP00749 431 aa10.55□□□□□ -0.72
SF3B3-208ENST00000567250 TFP02787 698 aa10.55□□□□□ -0.72
SF3B3-208ENST00000567250 RAF1P04049 648 aa10.55□□□□□ -0.72
SF3B3-208ENST00000567250 SPARCP09486 303 aa10.55□□□□□ -0.72
SF3B3-208ENST00000567250 CLUP10909 449 aa10.55□□□□□ -0.72
SF3B3-208ENST00000567250 STOMP27105 288 aa10.55□□□□□ -0.72
SF3B3-208ENST00000567250 EPHA2P29317 976 aa10.55□□□□□ -0.72
SF3B3-208ENST00000567250 HTR5AP47898 357 aa10.55□□□□□ -0.72
SF3B3-208ENST00000567250 ENTPD1P49961 510 aa10.55□□□□□ -0.72
SF3B3-208ENST00000567250 GDI2P50395 445 aaKnown RBP10.55□□□□□ -0.72
SF3B3-208ENST00000567250 SLC34A1Q06495 639 aa10.55□□□□□ -0.72
SF3B3-208ENST00000567250 SNTB2Q13425 540 aaKnown RBP10.55□□□□□ -0.72
SF3B3-208ENST00000567250 KEAP1Q14145 624 aa10.55□□□□□ -0.72
SF3B3-208ENST00000567250 MEP1BQ16820 701 aa10.55□□□□□ -0.72
SF3B3-208ENST00000567250 ZIK1Q3SY52 487 aaPredicted RBP10.55□□□□□ -0.72
SF3B3-208ENST00000567250 CDH24Q86UP0 819 aa10.55□□□□□ -0.72
SF3B3-208ENST00000567250 C1orf174Q8IYL3 243 aa10.55□□□□□ -0.72
SF3B3-208ENST00000567250 ZNF555Q8NEP9 628 aa10.55□□□□□ -0.72
SF3B3-208ENST00000567250 AKR7LQ8NHP1 331 aa10.55□□□□□ -0.72
SF3B3-208ENST00000567250 TRUB1Q8WWH5 349 aaKnown RBP10.55□□□□□ -0.72
SF3B3-208ENST00000567250 NINJ1Q92982 152 aa10.55□□□□□ -0.72
SF3B3-208ENST00000567250 INTS14Q96SY0 518 aa10.55□□□□□ -0.72
SF3B3-208ENST00000567250 DHRS9Q9BPW9 319 aa10.55□□□□□ -0.72
SF3B3-208ENST00000567250 GRIP2Q9C0E4 1043 aa10.55□□□□□ -0.72
SF3B3-208ENST00000567250 WNT5BQ9H1J7 359 aa10.55□□□□□ -0.72
SF3B3-208ENST00000567250 VCX3BQ9H321 246 aa10.55□□□□□ -0.72
SF3B3-208ENST00000567250 TOR3AQ9H497 397 aa10.55□□□□□ -0.72
SF3B3-208ENST00000567250 MED20Q9H944 212 aa10.55□□□□□ -0.72
SF3B3-208ENST00000567250 RNPEPL1Q9HAU8 725 aa10.55□□□□□ -0.72
SF3B3-208ENST00000567250 MRPL22Q9NWU5 206 aaKnown RBP10.55□□□□□ -0.72
SF3B3-208ENST00000567250 EIF3KQ9UBQ5 218 aaKnown RBP10.55□□□□□ -0.72
SF3B3-208ENST00000567250 GMPPBQ9Y5P6 360 aa10.55□□□□□ -0.72
SF3B3-208ENST00000567250 LHFPL6Q9Y693 200 aa10.55□□□□□ -0.72
SF3B3-208ENST00000567250 OR6C6A6NF89 314 aa10.54□□□□□ -0.72
SF3B3-208ENST00000567250 TVP23AA6NH52 213 aa10.54□□□□□ -0.72
SF3B3-208ENST00000567250 SNTNA6NMZ2 147 aa10.54□□□□□ -0.72
SF3B3-208ENST00000567250 MPZL2O60487 215 aa10.54□□□□□ -0.72
SF3B3-208ENST00000567250 GPANK1O95872 356 aa10.54□□□□□ -0.72
SF3B3-208ENST00000567250 SCG5P05408 212 aa10.54□□□□□ -0.72
SF3B3-208ENST00000567250 ZNF35P13682 527 aa10.54□□□□□ -0.72
SF3B3-208ENST00000567250 CCNOP22674 350 aa10.54□□□□□ -0.72
SF3B3-208ENST00000567250 APEX1P27695 318 aaKnown RBP10.54□□□□□ -0.72
SF3B3-208ENST00000567250 GSTT1P30711 240 aa10.54□□□□□ -0.72
SF3B3-208ENST00000567250 CALCRP30988 508 aa10.54□□□□□ -0.72
SF3B3-208ENST00000567250 GGT2P36268 569 aa10.54□□□□□ -0.72
SF3B3-208ENST00000567250 KRTAP10-9P60411 292 aa10.54□□□□□ -0.72
SF3B3-208ENST00000567250 CACNA1DQ01668 2161 aa10.54□□□□□ -0.72
SF3B3-208ENST00000567250 ECH1Q13011 328 aa10.54□□□□□ -0.72
SF3B3-208ENST00000567250 APOFQ13790 326 aa10.54□□□□□ -0.72
SF3B3-208ENST00000567250 LRRC36Q1X8D7 754 aa10.54□□□□□ -0.72
SF3B3-208ENST00000567250 TEX30Q5JUR7 227 aa10.54□□□□□ -0.72
SF3B3-208ENST00000567250 ELFN2Q5R3F8 820 aa10.54□□□□□ -0.72
SF3B3-208ENST00000567250 OGFRL1Q5TC84 451 aaPredicted RBP10.54□□□□□ -0.72
SF3B3-208ENST00000567250 LINC01590Q5TEZ4 76 aa10.54□□□□□ -0.72
SF3B3-208ENST00000567250 AGAP6Q5VW22 663 aa10.54□□□□□ -0.72
SF3B3-208ENST00000567250 LPCAT4Q643R3 524 aa10.54□□□□□ -0.72
SF3B3-208ENST00000567250 SLC18B1Q6NT16 456 aa10.54□□□□□ -0.72
SF3B3-208ENST00000567250 ZNF774Q6NX45 483 aa10.54□□□□□ -0.72
SF3B3-208ENST00000567250 VASH1Q7L8A9 365 aaPredicted RBP10.54□□□□□ -0.72
SF3B3-208ENST00000567250 SHFQ7M4L6 423 aa10.54□□□□□ -0.72
SF3B3-208ENST00000567250 ERI1Q8IV48 349 aaKnown RBP10.54□□□□□ -0.72
SF3B3-208ENST00000567250 LINC00346Q8IVM7 164 aa10.54□□□□□ -0.72
SF3B3-208ENST00000567250 FBXL14Q8N1E6 418 aa10.54□□□□□ -0.72
SF3B3-208ENST00000567250 OR6N2Q8NGY6 317 aa10.54□□□□□ -0.72
SF3B3-208ENST00000567250 PTP4A1Q93096 173 aa10.54□□□□□ -0.72
SF3B3-208ENST00000567250 RFKQ969G6 155 aa10.54□□□□□ -0.72
SF3B3-208ENST00000567250 PIGTQ969N2 578 aa10.54□□□□□ -0.72
SF3B3-208ENST00000567250 DCLRE1CQ96SD1 692 aaKnown RBP10.54□□□□□ -0.72
SF3B3-208ENST00000567250 PITX2Q99697 317 aa10.54□□□□□ -0.72
SF3B3-208ENST00000567250 CCL19Q99731 98 aa10.54□□□□□ -0.72
SF3B3-208ENST00000567250 COQ7Q99807 217 aa10.54□□□□□ -0.72
SF3B3-208ENST00000567250 SLC29A1Q99808 456 aa10.54□□□□□ -0.72
SF3B3-208ENST00000567250 ATF6BQ99941 703 aa10.54□□□□□ -0.72
SF3B3-208ENST00000567250 HCAR1Q9BXC0 346 aa10.54□□□□□ -0.72
SF3B3-208ENST00000567250 BCL2L14Q9BZR8 327 aa10.54□□□□□ -0.72
SF3B3-208ENST00000567250 ZNF442Q9H7R0 627 aa10.54□□□□□ -0.72
SF3B3-208ENST00000567250 MARCH7Q9H992 704 aa10.54□□□□□ -0.72
SF3B3-208ENST00000567250 ELOVL3Q9HB03 270 aa10.54□□□□□ -0.72
SF3B3-208ENST00000567250 CA10Q9NS85 328 aa10.54□□□□□ -0.72
SF3B3-208ENST00000567250 CYB5R1Q9UHQ9 305 aa10.54□□□□□ -0.72
SF3B3-208ENST00000567250 ST6GALNAC2Q9UJ37 374 aa10.54□□□□□ -0.72
SF3B3-208ENST00000567250 GDF2Q9UK05 429 aaPredicted RBP10.54□□□□□ -0.72
SF3B3-208ENST00000567250 FBXO9Q9UK97 447 aaPredicted RBP10.54□□□□□ -0.72
SF3B3-208ENST00000567250 CADP27708 2225 aa10.53□□□□□ -0.72
SF3B3-208ENST00000567250 C5orf49A4QMS7 147 aa10.53□□□□□ -0.72
SF3B3-208ENST00000567250 ZNF878C9JN71 531 aa10.53□□□□□ -0.72
SF3B3-208ENST00000567250 J3QW42 95 aa10.53□□□□□ -0.72
SF3B3-208ENST00000567250 RER1O15258 196 aa10.53□□□□□ -0.72
SF3B3-208ENST00000567250 BMP4P12644 408 aa10.53□□□□□ -0.72
SF3B3-208ENST00000567250 SLC2A5P22732 501 aa10.53□□□□□ -0.72
SF3B3-208ENST00000567250 NR4A1P22736 598 aa10.53□□□□□ -0.72
SF3B3-208ENST00000567250 DNASE1P24855 282 aa10.53□□□□□ -0.72
SF3B3-208ENST00000567250 PCSK6P29122 969 aa10.53□□□□□ -0.72
SF3B3-208ENST00000567250 APOBEC3AP31941 199 aaPredicted RBP10.53□□□□□ -0.72
SF3B3-208ENST00000567250 POLR2IP36954 125 aaKnown RBP10.53□□□□□ -0.72
SF3B3-208ENST00000567250 RAD52P43351 418 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms