RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 DBPQ10586 325 aaPredicted RBP8.18□□□□□ -1.1
CAPN3-216ENST00000567071 CBFBQ13951 182 aa8.18□□□□□ -1.1
CAPN3-216ENST00000567071 HERPUD1Q15011 391 aa8.18□□□□□ -1.1
CAPN3-216ENST00000567071 LAPTM4AQ15012 233 aa8.18□□□□□ -1.1
CAPN3-216ENST00000567071 OR1Q1Q15612 314 aa8.18□□□□□ -1.1
CAPN3-216ENST00000567071 TOMM34Q15785 309 aaPredicted RBP8.18□□□□□ -1.1
CAPN3-216ENST00000567071 SNCBQ16143 134 aa8.18□□□□□ -1.1
CAPN3-216ENST00000567071 LRRC36Q1X8D7 754 aa8.18□□□□□ -1.1
CAPN3-216ENST00000567071 LPCAT4Q643R3 524 aa8.18□□□□□ -1.1
CAPN3-216ENST00000567071 Q6YL49 198 aa8.18□□□□□ -1.1
CAPN3-216ENST00000567071 TUBA1AQ71U36 451 aa8.18□□□□□ -1.1
CAPN3-216ENST00000567071 TMEM179BQ7Z7N9 219 aa8.18□□□□□ -1.1
CAPN3-216ENST00000567071 OFCC1Q8IZS5 231 aa8.18□□□□□ -1.1
CAPN3-216ENST00000567071 HS3ST5Q8IZT8 346 aa8.18□□□□□ -1.1
CAPN3-216ENST00000567071 OR5W2Q8NH69 310 aa8.18□□□□□ -1.1
CAPN3-216ENST00000567071 ZNF563Q8TA94 476 aa8.18□□□□□ -1.1
CAPN3-216ENST00000567071 MAGEE2Q8TD90 523 aaPredicted RBP8.18□□□□□ -1.1
CAPN3-216ENST00000567071 SLC35B4Q969S0 331 aa8.18□□□□□ -1.1
CAPN3-216ENST00000567071 ZNF524Q96C55 264 aa8.18□□□□□ -1.1
CAPN3-216ENST00000567071 CENPNQ96H22 339 aaPredicted RBP8.18□□□□□ -1.1
CAPN3-216ENST00000567071 DIRC2Q96SL1 478 aa8.18□□□□□ -1.1
CAPN3-216ENST00000567071 EVA1AQ9H8M9 152 aa8.18□□□□□ -1.1
CAPN3-216ENST00000567071 TMEM27Q9HBJ8 222 aa8.18□□□□□ -1.1
CAPN3-216ENST00000567071 DECR2Q9NUI1 292 aa8.18□□□□□ -1.1
CAPN3-216ENST00000567071 GAR1Q9NY12 217 aaKnown RBP8.18□□□□□ -1.1
CAPN3-216ENST00000567071 RPS6KB2Q9UBS0 482 aa8.18□□□□□ -1.1
CAPN3-216ENST00000567071 OR5V1Q9UGF6 321 aa8.18□□□□□ -1.1
CAPN3-216ENST00000567071 DUSP13Q9UII6 198 aa8.18□□□□□ -1.1
CAPN3-216ENST00000567071 SLC7A7Q9UM01 511 aa8.18□□□□□ -1.1
CAPN3-216ENST00000567071 LYVE1Q9Y5Y7 322 aa8.18□□□□□ -1.1
CAPN3-216ENST00000567071 TRBV4-1A0A0J9YWV2 114 aa8.17□□□□□ -1.1
CAPN3-216ENST00000567071 TRAPPC13A5PLN9 417 aa8.17□□□□□ -1.1
CAPN3-216ENST00000567071 TNFRSF11BO00300 401 aa8.17□□□□□ -1.1
CAPN3-216ENST00000567071 GADD45GO95257 159 aa8.17□□□□□ -1.1
CAPN3-216ENST00000567071 THY1P04216 161 aa8.17□□□□□ -1.1
CAPN3-216ENST00000567071 CBR1P16152 277 aa8.17□□□□□ -1.1
CAPN3-216ENST00000567071 NR4A1P22736 598 aa8.17□□□□□ -1.1
CAPN3-216ENST00000567071 ARR3P36575 388 aa8.17□□□□□ -1.1
CAPN3-216ENST00000567071 MAGEB1P43366 347 aa8.17□□□□□ -1.1
CAPN3-216ENST00000567071 BPIFB3P59826 476 aa8.17□□□□□ -1.1
CAPN3-216ENST00000567071 GUCA2AQ02747 115 aa8.17□□□□□ -1.1
CAPN3-216ENST00000567071 QPRTQ15274 297 aa8.17□□□□□ -1.1
CAPN3-216ENST00000567071 SYT14P1Q58G82 188 aa8.17□□□□□ -1.1
CAPN3-216ENST00000567071 SLC25A53Q5H9E4 307 aa8.17□□□□□ -1.1
CAPN3-216ENST00000567071 ALG10BQ5I7T1 473 aa8.17□□□□□ -1.1
CAPN3-216ENST00000567071 WBP2NLQ6ICG8 309 aa8.17□□□□□ -1.1
CAPN3-216ENST00000567071 BTNL3Q6UXE8 466 aa8.17□□□□□ -1.1
CAPN3-216ENST00000567071 GDPGP1Q6ZNW5 385 aa8.17□□□□□ -1.1
CAPN3-216ENST00000567071 EPHX4Q8IUS5 362 aa8.17□□□□□ -1.1
CAPN3-216ENST00000567071 PIK3C3Q8NEB9 887 aa8.17□□□□□ -1.1
CAPN3-216ENST00000567071 OR10S1Q8NGN2 331 aa8.17□□□□□ -1.1
CAPN3-216ENST00000567071 GPR119Q8TDV5 335 aa8.17□□□□□ -1.1
CAPN3-216ENST00000567071 NRG4Q8WWG1 115 aa8.17□□□□□ -1.1
CAPN3-216ENST00000567071 SLC41A3Q96GZ6 507 aa8.17□□□□□ -1.1
CAPN3-216ENST00000567071 CIB1Q99828 191 aa8.17□□□□□ -1.1
CAPN3-216ENST00000567071 C16orf95Q9H693 158 aa8.17□□□□□ -1.1
CAPN3-216ENST00000567071 NMNAT1Q9HAN9 279 aaPredicted RBP8.17□□□□□ -1.1
CAPN3-216ENST00000567071 MAN2C1Q9NTJ4 1040 aa8.17□□□□□ -1.1
CAPN3-216ENST00000567071 ACER3Q9NUN7 267 aa8.17□□□□□ -1.1
CAPN3-216ENST00000567071 IL20RAQ9UHF4 553 aa8.17□□□□□ -1.1
CAPN3-216ENST00000567071 OAZ3Q9UMX2 235 aa8.17□□□□□ -1.1
CAPN3-216ENST00000567071 POLR3KQ9Y2Y1 108 aaPredicted RBP8.17□□□□□ -1.1
CAPN3-216ENST00000567071 SOX21Q9Y651 276 aaPredicted RBP8.17□□□□□ -1.1
CAPN3-216ENST00000567071 A0A096LPE4 126 aa8.16□□□□□ -1.1
CAPN3-216ENST00000567071 A0A0B4J2E0 115 aa8.16□□□□□ -1.1
CAPN3-216ENST00000567071 A0A1B0GX12 115 aa8.16□□□□□ -1.1
CAPN3-216ENST00000567071 A0A1W2PPZ6 126 aa8.16□□□□□ -1.1
CAPN3-216ENST00000567071 H0YL77 283 aa8.16□□□□□ -1.1
CAPN3-216ENST00000567071 KPNA4O00629 521 aaPredicted RBP8.16□□□□□ -1.1
CAPN3-216ENST00000567071 LYPD3O95274 346 aa8.16□□□□□ -1.1
CAPN3-216ENST00000567071 PMS2P2O95744 297 aa8.16□□□□□ -1.1
CAPN3-216ENST00000567071 MELTFP08582 738 aa8.16□□□□□ -1.1
CAPN3-216ENST00000567071 CELA3BP08861 270 aa8.16□□□□□ -1.1
CAPN3-216ENST00000567071 CCNA2P20248 432 aa8.16□□□□□ -1.1
CAPN3-216ENST00000567071 IFNA8P32881 189 aa8.16□□□□□ -1.1
CAPN3-216ENST00000567071 GLRXP35754 106 aa8.16□□□□□ -1.1
CAPN3-216ENST00000567071 SH3BGRP55822 239 aaPredicted RBP8.16□□□□□ -1.1
CAPN3-216ENST00000567071 GALK2Q01415 458 aa8.16□□□□□ -1.1
CAPN3-216ENST00000567071 EGR3Q06889 387 aa8.16□□□□□ -1.1
CAPN3-216ENST00000567071 ST3GAL3Q11203 375 aa8.16□□□□□ -1.1
CAPN3-216ENST00000567071 TRAM2Q15035 370 aa8.16□□□□□ -1.1
CAPN3-216ENST00000567071 SEC23BQ15437 767 aa8.16□□□□□ -1.1
CAPN3-216ENST00000567071 ZNF613Q6PF04 617 aa8.16□□□□□ -1.1
CAPN3-216ENST00000567071 WDR88Q6ZMY6 472 aa8.16□□□□□ -1.1
CAPN3-216ENST00000567071 USP51Q70EK9 711 aa8.16□□□□□ -1.1
CAPN3-216ENST00000567071 NKAIN4Q8IVV8 208 aa8.16□□□□□ -1.1
CAPN3-216ENST00000567071 CCDC103Q8IW40 242 aa8.16□□□□□ -1.1
CAPN3-216ENST00000567071 C1orf174Q8IYL3 243 aa8.16□□□□□ -1.1
CAPN3-216ENST00000567071 ZSCAN4Q8NAM6 433 aaPredicted RBP8.16□□□□□ -1.1
CAPN3-216ENST00000567071 OR9Q2Q8NGE9 314 aa8.16□□□□□ -1.1
CAPN3-216ENST00000567071 OR4C15Q8NGM1 316 aa8.16□□□□□ -1.1
CAPN3-216ENST00000567071 OR5K1Q8NHB7 308 aa8.16□□□□□ -1.1
CAPN3-216ENST00000567071 BCL2L2Q92843 193 aaPredicted RBP8.16□□□□□ -1.1
CAPN3-216ENST00000567071 EME1Q96AY2 570 aa8.16□□□□□ -1.1
CAPN3-216ENST00000567071 UPRTQ96BW1 309 aa8.16□□□□□ -1.1
CAPN3-216ENST00000567071 ELMOD3Q96FG2 381 aa8.16□□□□□ -1.1
CAPN3-216ENST00000567071 DHRS1Q96LJ7 313 aa8.16□□□□□ -1.1
CAPN3-216ENST00000567071 EPYCQ99645 322 aa8.16□□□□□ -1.1
CAPN3-216ENST00000567071 NAA11Q9BSU3 229 aaPredicted RBP8.16□□□□□ -1.1
CAPN3-216ENST00000567071 POLR2J2Q9GZM3 115 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms