RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 RASSF1Q9NS23 344 aa10□□□□□ -0.81
KARS-207ENST00000566560 H2AFY2Q9P0M6 372 aaPredicted RBP10□□□□□ -0.81
KARS-207ENST00000566560 KCNG2Q9UJ96 466 aa10□□□□□ -0.81
KARS-207ENST00000566560 CADP27708 2225 aa9.99□□□□□ -0.81
KARS-207ENST00000566560 SELENOFO60613 162 aa9.99□□□□□ -0.81
KARS-207ENST00000566560 MMP7P09237 267 aaPredicted RBP9.99□□□□□ -0.81
KARS-207ENST00000566560 GNAO1P09471 354 aa9.99□□□□□ -0.81
KARS-207ENST00000566560 EPXP11678 715 aa9.99□□□□□ -0.81
KARS-207ENST00000566560 CD33P20138 364 aa9.99□□□□□ -0.81
KARS-207ENST00000566560 PAX7P23759 505 aa9.99□□□□□ -0.81
KARS-207ENST00000566560 COL8A1P27658 744 aa9.99□□□□□ -0.81
KARS-207ENST00000566560 ARR3P36575 388 aa9.99□□□□□ -0.81
KARS-207ENST00000566560 NAA10P41227 235 aaPredicted RBP9.99□□□□□ -0.81
KARS-207ENST00000566560 BEX5Q5H9J7 111 aa9.99□□□□□ -0.81
KARS-207ENST00000566560 LCE2AQ5TA79 106 aaPredicted RBP9.99□□□□□ -0.81
KARS-207ENST00000566560 B3GLCTQ6Y288 498 aa9.99□□□□□ -0.81
KARS-207ENST00000566560 MEPCEQ7L2J0 689 aaKnown RBP9.99□□□□□ -0.81
KARS-207ENST00000566560 LINC00346Q8IVM7 164 aa9.99□□□□□ -0.81
KARS-207ENST00000566560 C8orf59Q8N0T1 100 aaPredicted RBP9.99□□□□□ -0.81
KARS-207ENST00000566560 TFAP2CQ92754 450 aa9.99□□□□□ -0.81
KARS-207ENST00000566560 RFKQ969G6 155 aa9.99□□□□□ -0.81
KARS-207ENST00000566560 UBE2FQ969M7 185 aa9.99□□□□□ -0.81
KARS-207ENST00000566560 FBXO17Q96EF6 278 aa9.99□□□□□ -0.81
KARS-207ENST00000566560 CNN2Q99439 309 aaKnown RBP9.99□□□□□ -0.81
KARS-207ENST00000566560 CDADC1Q9BWV3 514 aa9.99□□□□□ -0.81
KARS-207ENST00000566560 RASSF4Q9H2L5 321 aa9.99□□□□□ -0.81
KARS-207ENST00000566560 WDR76Q9H967 626 aa9.99□□□□□ -0.81
KARS-207ENST00000566560 CLN6Q9NWW5 311 aa9.99□□□□□ -0.81
KARS-207ENST00000566560 B3GNT2Q9NY97 397 aa9.99□□□□□ -0.81
KARS-207ENST00000566560 KCNN3Q9UGI6 736 aa9.99□□□□□ -0.81
KARS-207ENST00000566560 FBXL3Q9UKT7 428 aa9.99□□□□□ -0.81
KARS-207ENST00000566560 LHFPL6Q9Y693 200 aa9.99□□□□□ -0.81
KARS-207ENST00000566560 ABCA4P78363 2273 aa9.99□□□□□ -0.81
KARS-207ENST00000566560 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.98□□□□□ -0.81
KARS-207ENST00000566560 SNTNA6NMZ2 147 aa9.98□□□□□ -0.81
KARS-207ENST00000566560 DOK2O60496 412 aa9.98□□□□□ -0.81
KARS-207ENST00000566560 ENTPD6O75354 484 aa9.98□□□□□ -0.81
KARS-207ENST00000566560 IGKV3-15P01624 115 aa9.98□□□□□ -0.81
KARS-207ENST00000566560 IGLV1-44P01699 117 aa9.98□□□□□ -0.81
KARS-207ENST00000566560 CELA3BP08861 270 aa9.98□□□□□ -0.81
KARS-207ENST00000566560 MRPL3P09001 348 aaKnown RBP9.98□□□□□ -0.81
KARS-207ENST00000566560 CECR9P0C854 216 aa9.98□□□□□ -0.81
KARS-207ENST00000566560 PSKH1P11801 424 aa9.98□□□□□ -0.81
KARS-207ENST00000566560 CBR1P16152 277 aa9.98□□□□□ -0.81
KARS-207ENST00000566560 GABRB1P18505 474 aa9.98□□□□□ -0.81
KARS-207ENST00000566560 HTR1FP30939 366 aa9.98□□□□□ -0.81
KARS-207ENST00000566560 RPS27P42677 84 aaKnown RBP9.98□□□□□ -0.81
KARS-207ENST00000566560 RAB1AP62820 205 aa9.98□□□□□ -0.81
KARS-207ENST00000566560 GGTLC2Q14390 218 aa9.98□□□□□ -0.81
KARS-207ENST00000566560 MAD2L1BPQ15013 274 aaPredicted RBP9.98□□□□□ -0.81
KARS-207ENST00000566560 PABPC1L2AQ5JQF8 200 aa9.98□□□□□ -0.81
KARS-207ENST00000566560 SLC25A30Q5SVS4 291 aa9.98□□□□□ -0.81
KARS-207ENST00000566560 MEDAGQ5VYS4 303 aa9.98□□□□□ -0.81
KARS-207ENST00000566560 SP5Q6BEB4 398 aaPredicted RBP9.98□□□□□ -0.81
KARS-207ENST00000566560 SLC18B1Q6NT16 456 aa9.98□□□□□ -0.81
KARS-207ENST00000566560 CORO6Q6QEF8 472 aa9.98□□□□□ -0.81
KARS-207ENST00000566560 TMEM108Q6UXF1 575 aa9.98□□□□□ -0.81
KARS-207ENST00000566560 SYT9Q86SS6 491 aa9.98□□□□□ -0.81
KARS-207ENST00000566560 MYPOPQ86VE0 399 aaPredicted RBP9.98□□□□□ -0.81
KARS-207ENST00000566560 TIGD4Q8IY51 512 aa9.98□□□□□ -0.81
KARS-207ENST00000566560 FAM169BQ8N8A8 192 aa9.98□□□□□ -0.81
KARS-207ENST00000566560 OR2AJ1Q8NGZ0 328 aa9.98□□□□□ -0.81
KARS-207ENST00000566560 APH1BQ8WW43 257 aa9.98□□□□□ -0.81
KARS-207ENST00000566560 PLPPR2Q96GM1 343 aa9.98□□□□□ -0.81
KARS-207ENST00000566560 Q96MT0 163 aa9.98□□□□□ -0.81
KARS-207ENST00000566560 ZNF184Q99676 751 aaPredicted RBP9.98□□□□□ -0.81
KARS-207ENST00000566560 WACQ9BTA9 647 aa9.98□□□□□ -0.81
KARS-207ENST00000566560 OR2H1Q9GZK4 316 aa9.98□□□□□ -0.81
KARS-207ENST00000566560 ESRP2Q9H6T0 727 aaKnown RBP9.98□□□□□ -0.81
KARS-207ENST00000566560 MARCH7Q9H992 704 aa9.98□□□□□ -0.81
KARS-207ENST00000566560 CRNNQ9UBG3 495 aaPredicted RBP9.98□□□□□ -0.81
KARS-207ENST00000566560 AASSQ9UDR5 926 aa9.98□□□□□ -0.81
KARS-207ENST00000566560 WARS2Q9UGM6 360 aaKnown RBP9.98□□□□□ -0.81
KARS-207ENST00000566560 CYB5R1Q9UHQ9 305 aa9.98□□□□□ -0.81
KARS-207ENST00000566560 GDF2Q9UK05 429 aaPredicted RBP9.98□□□□□ -0.81
KARS-207ENST00000566560 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.98□□□□□ -0.81
KARS-207ENST00000566560 TIMM10BQ9Y5J6 103 aa9.98□□□□□ -0.81
KARS-207ENST00000566560 HSPE1-MOB4S4R3N1 261 aa9.98□□□□□ -0.81
KARS-207ENST00000566560 HEATR1Q9H583 2144 aaKnown RBP9.98□□□□□ -0.81
KARS-207ENST00000566560 ADGRG4Q8IZF6 3080 aa9.98□□□□□ -0.81
KARS-207ENST00000566560 PLCE1Q9P212 2302 aa9.98□□□□□ -0.81
KARS-207ENST00000566560 BAHCC1Q9P281 2608 aa9.97□□□□□ -0.81
KARS-207ENST00000566560 HECTD1Q9ULT8 2610 aa9.97□□□□□ -0.81
KARS-207ENST00000566560 IGHV1-18A0A0C4DH31 117 aa9.97□□□□□ -0.81
KARS-207ENST00000566560 IQCMA0A1B0GVH7 501 aa9.97□□□□□ -0.81
KARS-207ENST00000566560 DEFB108AA8MXU0 73 aa9.97□□□□□ -0.81
KARS-207ENST00000566560 RER1O15258 196 aa9.97□□□□□ -0.81
KARS-207ENST00000566560 SGCEO43556 437 aa9.97□□□□□ -0.81
KARS-207ENST00000566560 TMCC2O75069 709 aa9.97□□□□□ -0.81
KARS-207ENST00000566560 ZNF14P17017 642 aaPredicted RBP9.97□□□□□ -0.81
KARS-207ENST00000566560 NUDT6P53370 316 aa9.97□□□□□ -0.81
KARS-207ENST00000566560 NR1H2P55055 460 aa9.97□□□□□ -0.81
KARS-207ENST00000566560 PSG4Q00888 419 aa9.97□□□□□ -0.81
KARS-207ENST00000566560 PLP2Q04941 152 aa9.97□□□□□ -0.81
KARS-207ENST00000566560 ZNF91Q05481 1191 aa9.97□□□□□ -0.81
KARS-207ENST00000566560 BSPH1Q075Z2 132 aa9.97□□□□□ -0.81
KARS-207ENST00000566560 SPOCK1Q08629 439 aa9.97□□□□□ -0.81
KARS-207ENST00000566560 RAB39AQ14964 217 aa9.97□□□□□ -0.81
KARS-207ENST00000566560 RAB35Q15286 201 aa9.97□□□□□ -0.81
KARS-207ENST00000566560 C3orf36Q3SXR2 165 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms