RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 LMX1BO60663 402 aa12.79□□□□□ -0.36
CDH1-209ENST00000566510 HLA-AP01891 365 aaKnown RBP12.79□□□□□ -0.36
CDH1-209ENST00000566510 HLA-DOBP13765 273 aa12.79□□□□□ -0.36
CDH1-209ENST00000566510 RPA2P15927 270 aa12.79□□□□□ -0.36
CDH1-209ENST00000566510 PMPCAQ10713 525 aa12.79□□□□□ -0.36
CDH1-209ENST00000566510 NR0B2Q15466 257 aa12.79□□□□□ -0.36
CDH1-209ENST00000566510 MPPED2Q15777 294 aa12.79□□□□□ -0.36
CDH1-209ENST00000566510 FDX2Q6P4F2 183 aa12.79□□□□□ -0.36
CDH1-209ENST00000566510 CFAP77Q6ZQR2 320 aa12.79□□□□□ -0.36
CDH1-209ENST00000566510 LHFPL5Q8TAF8 219 aa12.79□□□□□ -0.36
CDH1-209ENST00000566510 ZNF721Q8TF20 911 aa12.79□□□□□ -0.36
CDH1-209ENST00000566510 SLC25A28Q96A46 364 aa12.79□□□□□ -0.36
CDH1-209ENST00000566510 ZNF587Q96SQ5 575 aaPredicted RBP12.79□□□□□ -0.36
CDH1-209ENST00000566510 TXNIPQ9H3M7 391 aa12.79□□□□□ -0.36
CDH1-209ENST00000566510 CENPMQ9NSP4 180 aa12.79□□□□□ -0.36
CDH1-209ENST00000566510 A0A1W2PPC1 479 aa12.79□□□□□ -0.36
CDH1-209ENST00000566510 OR5H14A6NHG9 310 aa12.79□□□□□ -0.36
CDH1-209ENST00000566510 D6RAR5 112 aa12.79□□□□□ -0.36
CDH1-209ENST00000566510 TSPAN9O75954 239 aa12.79□□□□□ -0.36
CDH1-209ENST00000566510 ZNF823P16415 610 aa12.79□□□□□ -0.36
CDH1-209ENST00000566510 STARP49675 285 aa12.79□□□□□ -0.36
CDH1-209ENST00000566510 UBXN2BQ14CS0 331 aa12.79□□□□□ -0.36
CDH1-209ENST00000566510 CDNFQ49AH0 187 aa12.79□□□□□ -0.36
CDH1-209ENST00000566510 C1orf140Q5VVS0 124 aa12.79□□□□□ -0.36
CDH1-209ENST00000566510 Q6ZS52 159 aa12.79□□□□□ -0.36
CDH1-209ENST00000566510 TMEM229BQ8NBD8 167 aa12.79□□□□□ -0.36
CDH1-209ENST00000566510 CHST4Q8NCG5 386 aa12.79□□□□□ -0.36
CDH1-209ENST00000566510 FAM46BQ96A09 425 aa12.79□□□□□ -0.36
CDH1-209ENST00000566510 C8orf44Q96CB5 159 aa12.79□□□□□ -0.36
CDH1-209ENST00000566510 MRPL38Q96DV4 380 aaKnown RBP12.79□□□□□ -0.36
CDH1-209ENST00000566510 PRMT8Q9NR22 394 aaPredicted RBP12.79□□□□□ -0.36
CDH1-209ENST00000566510 SLC17A5Q9NRA2 495 aa12.79□□□□□ -0.36
CDH1-209ENST00000566510 MED9Q9NWA0 146 aa12.79□□□□□ -0.36
CDH1-209ENST00000566510 PLEKHA6Q9Y2H5 1048 aa12.79□□□□□ -0.36
CDH1-209ENST00000566510 TRAV14DV4A0A0A6YYC5 116 aa12.78□□□□□ -0.36
CDH1-209ENST00000566510 IGLV1-36A0A0B4J1U3 117 aa12.78□□□□□ -0.36
CDH1-209ENST00000566510 C2orf72A6NCS6 295 aa12.78□□□□□ -0.36
CDH1-209ENST00000566510 H3BUI4 141 aa12.78□□□□□ -0.36
CDH1-209ENST00000566510 DDAH2O95865 285 aa12.78□□□□□ -0.36
CDH1-209ENST00000566510 FGF2P09038 288 aa12.78□□□□□ -0.36
CDH1-209ENST00000566510 CD34P28906 385 aa12.78□□□□□ -0.36
CDH1-209ENST00000566510 MPGP29372 298 aa12.78□□□□□ -0.36
CDH1-209ENST00000566510 GALNSP34059 522 aa12.78□□□□□ -0.36
CDH1-209ENST00000566510 DHRS2Q13268 280 aa12.78□□□□□ -0.36
CDH1-209ENST00000566510 LY6G6FQ5SQ64 297 aa12.78□□□□□ -0.36
CDH1-209ENST00000566510 COL13A1Q5TAT6 717 aaPredicted RBP12.78□□□□□ -0.36
CDH1-209ENST00000566510 ELP2Q6IA86 826 aa12.78□□□□□ -0.36
CDH1-209ENST00000566510 FAM166AQ6J272 317 aa12.78□□□□□ -0.36
CDH1-209ENST00000566510 CORO6Q6QEF8 472 aa12.78□□□□□ -0.36
CDH1-209ENST00000566510 OVCH2Q7RTZ1 564 aa12.78□□□□□ -0.36
CDH1-209ENST00000566510 DCXRQ7Z4W1 244 aa12.78□□□□□ -0.36
CDH1-209ENST00000566510 ADGRE4PQ86SQ3 457 aa12.78□□□□□ -0.36
CDH1-209ENST00000566510 CATSPERDQ86XM0 798 aa12.78□□□□□ -0.36
CDH1-209ENST00000566510 ZNF584Q8IVC4 421 aa12.78□□□□□ -0.36
CDH1-209ENST00000566510 C9orf40Q8IXQ3 194 aa12.78□□□□□ -0.36
CDH1-209ENST00000566510 BOLLQ8N9W6 283 aaKnown RBP12.78□□□□□ -0.36
CDH1-209ENST00000566510 OR6K3Q8NGY3 331 aa12.78□□□□□ -0.36
CDH1-209ENST00000566510 ZNF519Q8TB69 540 aa12.78□□□□□ -0.36
CDH1-209ENST00000566510 SLC25A21Q9BQT8 299 aaPredicted RBP12.78□□□□□ -0.36
CDH1-209ENST00000566510 COMMD9Q9P000 198 aa12.78□□□□□ -0.36
CDH1-209ENST00000566510 HHLA2Q9UM44 414 aa12.78□□□□□ -0.36
CDH1-209ENST00000566510 LOC107986453A0A1B0GWG9 222 aa12.78□□□□□ -0.36
CDH1-209ENST00000566510 MT-ATP6P00846 226 aa12.78□□□□□ -0.36
CDH1-209ENST00000566510 IL11P20809 199 aa12.78□□□□□ -0.36
CDH1-209ENST00000566510 CALCRP30988 508 aa12.78□□□□□ -0.36
CDH1-209ENST00000566510 GNALP38405 381 aa12.78□□□□□ -0.36
CDH1-209ENST00000566510 EIF1AXP47813 144 aaKnown RBP12.78□□□□□ -0.36
CDH1-209ENST00000566510 GABRA4P48169 554 aa12.78□□□□□ -0.36
CDH1-209ENST00000566510 ARL4DP49703 201 aa12.78□□□□□ -0.36
CDH1-209ENST00000566510 ARHGDIBP52566 201 aa12.78□□□□□ -0.36
CDH1-209ENST00000566510 FMODQ06828 376 aa12.78□□□□□ -0.36
CDH1-209ENST00000566510 EBPQ15125 230 aaKnown RBP12.78□□□□□ -0.36
CDH1-209ENST00000566510 DEFB133Q30KQ1 61 aa12.78□□□□□ -0.36
CDH1-209ENST00000566510 CLVS2Q5SYC1 327 aa12.78□□□□□ -0.36
CDH1-209ENST00000566510 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.78□□□□□ -0.36
CDH1-209ENST00000566510 ATPAF1Q5TC12 328 aaPredicted RBP12.78□□□□□ -0.36
CDH1-209ENST00000566510 SHISA6Q6ZSJ9 500 aa12.78□□□□□ -0.36
CDH1-209ENST00000566510 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.78□□□□□ -0.36
CDH1-209ENST00000566510 ZNF248Q8NDW4 579 aa12.78□□□□□ -0.36
CDH1-209ENST00000566510 PXT1Q8NFP0 134 aa12.78□□□□□ -0.36
CDH1-209ENST00000566510 OR10K1Q8NGX5 313 aa12.78□□□□□ -0.36
CDH1-209ENST00000566510 OR52N5Q8NH56 324 aa12.78□□□□□ -0.36
CDH1-209ENST00000566510 GPR119Q8TDV5 335 aa12.78□□□□□ -0.36
CDH1-209ENST00000566510 SLC6A7Q99884 636 aa12.78□□□□□ -0.36
CDH1-209ENST00000566510 TPSD1Q9BZJ3 242 aa12.78□□□□□ -0.36
CDH1-209ENST00000566510 COPS7AQ9UBW8 275 aa12.78□□□□□ -0.36
CDH1-209ENST00000566510 TMEM269A0A1B0GVZ9 245 aa12.77□□□□□ -0.36
CDH1-209ENST00000566510 ATP6V1G2-DDX39BF2Z307 99 aa12.77□□□□□ -0.36
CDH1-209ENST00000566510 BET1O15155 118 aa12.77□□□□□ -0.36
CDH1-209ENST00000566510 AQP8O94778 261 aa12.77□□□□□ -0.36
CDH1-209ENST00000566510 IGKV3-11P04433 115 aa12.77□□□□□ -0.36
CDH1-209ENST00000566510 ABCD3P28288 659 aa12.77□□□□□ -0.36
CDH1-209ENST00000566510 POLR2HP52434 150 aaKnown RBP12.77□□□□□ -0.36
CDH1-209ENST00000566510 CXADRP78310 365 aa12.77□□□□□ -0.36
CDH1-209ENST00000566510 ROM1Q03395 351 aa12.77□□□□□ -0.36
CDH1-209ENST00000566510 SSBP1Q04837 148 aaKnown RBP12.77□□□□□ -0.36
CDH1-209ENST00000566510 ELOCQ15369 112 aa12.77□□□□□ -0.36
CDH1-209ENST00000566510 C1orf189Q5VU69 101 aa12.77□□□□□ -0.36
CDH1-209ENST00000566510 C3orf33Q6P1S2 294 aa12.77□□□□□ -0.36
CDH1-209ENST00000566510 ST8SIA2Q92186 375 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms