RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 ZNF254O75437 659 aa16.8■□□□□ 0.28
CSPG4P13-201ENST00000565545 GABARAPO95166 117 aa16.8■□□□□ 0.28
CSPG4P13-201ENST00000565545 TGM4P49221 684 aa16.8■□□□□ 0.28
CSPG4P13-201ENST00000565545 GTF2A1P52655 376 aaPredicted RBP16.8■□□□□ 0.28
CSPG4P13-201ENST00000565545 DOC2BQ14184 412 aa16.8■□□□□ 0.28
CSPG4P13-201ENST00000565545 GUSBP1Q15486 140 aa16.8■□□□□ 0.28
CSPG4P13-201ENST00000565545 SSX1Q16384 188 aa16.8■□□□□ 0.28
CSPG4P13-201ENST00000565545 SGCAQ16586 387 aa16.8■□□□□ 0.28
CSPG4P13-201ENST00000565545 TSPO2Q5TGU0 170 aa16.8■□□□□ 0.28
CSPG4P13-201ENST00000565545 FAM27BQ5VT28 67 aa16.8■□□□□ 0.28
CSPG4P13-201ENST00000565545 GDPGP1Q6ZNW5 385 aa16.8■□□□□ 0.28
CSPG4P13-201ENST00000565545 PHC2Q8IXK0 858 aa16.8■□□□□ 0.28
CSPG4P13-201ENST00000565545 ZNF679Q8IYX0 411 aa16.8■□□□□ 0.28
CSPG4P13-201ENST00000565545 ST6GALNAC3Q8NDV1 305 aa16.8■□□□□ 0.28
CSPG4P13-201ENST00000565545 OR52N5Q8NH56 324 aa16.8■□□□□ 0.28
CSPG4P13-201ENST00000565545 PELI1Q96FA3 418 aa16.8■□□□□ 0.28
CSPG4P13-201ENST00000565545 MROQ9BYG7 248 aa16.8■□□□□ 0.28
CSPG4P13-201ENST00000565545 C1orf198Q9H425 327 aa16.8■□□□□ 0.28
CSPG4P13-201ENST00000565545 SIAEQ9HAT2 523 aa16.8■□□□□ 0.28
CSPG4P13-201ENST00000565545 TMEM38BQ9NVV0 291 aa16.8■□□□□ 0.28
CSPG4P13-201ENST00000565545 UPB1Q9UBR1 384 aa16.8■□□□□ 0.28
CSPG4P13-201ENST00000565545 OSGIN2Q9Y236 505 aa16.8■□□□□ 0.28
CSPG4P13-201ENST00000565545 POLR1DQ9Y2S0 133 aa16.8■□□□□ 0.28
CSPG4P13-201ENST00000565545 EMC9Q9Y3B6 208 aa16.8■□□□□ 0.28
CSPG4P13-201ENST00000565545 PHF3Q92576 2039 aaKnown RBP16.8■□□□□ 0.28
CSPG4P13-201ENST00000565545 MBD3L4A6NDZ8 208 aaPredicted RBP16.79■□□□□ 0.28
CSPG4P13-201ENST00000565545 MBD3L3A6NE82 208 aaPredicted RBP16.79■□□□□ 0.28
CSPG4P13-201ENST00000565545 MBD3L5A6NJ08 208 aaPredicted RBP16.79■□□□□ 0.28
CSPG4P13-201ENST00000565545 ZNF587BE7ETH6 402 aa16.79■□□□□ 0.28
CSPG4P13-201ENST00000565545 OGG1O15527 345 aa16.79■□□□□ 0.28
CSPG4P13-201ENST00000565545 LRRTM2O43300 516 aa16.79■□□□□ 0.28
CSPG4P13-201ENST00000565545 LALBAP00709 142 aa16.79■□□□□ 0.28
CSPG4P13-201ENST00000565545 CD1AP06126 327 aa16.79■□□□□ 0.28
CSPG4P13-201ENST00000565545 CRHP06850 196 aa16.79■□□□□ 0.28
CSPG4P13-201ENST00000565545 TPOP07202 933 aa16.79■□□□□ 0.28
CSPG4P13-201ENST00000565545 ABOP16442 354 aa16.79■□□□□ 0.28
CSPG4P13-201ENST00000565545 CDAP32320 146 aa16.79■□□□□ 0.28
CSPG4P13-201ENST00000565545 OR3A2P47893 321 aa16.79■□□□□ 0.28
CSPG4P13-201ENST00000565545 SIRPAP78324 504 aa16.79■□□□□ 0.28
CSPG4P13-201ENST00000565545 ROR2Q01974 943 aaKnown RBP16.79■□□□□ 0.28
CSPG4P13-201ENST00000565545 TRAM1Q15629 374 aa16.79■□□□□ 0.28
CSPG4P13-201ENST00000565545 CEACAM16Q2WEN9 425 aa16.79■□□□□ 0.28
CSPG4P13-201ENST00000565545 C1orf185Q5T7R7 199 aa16.79■□□□□ 0.28
CSPG4P13-201ENST00000565545 LIPKQ5VXJ0 399 aa16.79■□□□□ 0.28
CSPG4P13-201ENST00000565545 RPL22L1Q6P5R6 122 aaKnown RBP16.79■□□□□ 0.28
CSPG4P13-201ENST00000565545 SLC16A12Q6ZSM3 486 aa16.79■□□□□ 0.28
CSPG4P13-201ENST00000565545 FAM214BQ7L5A3 538 aa16.79■□□□□ 0.28
CSPG4P13-201ENST00000565545 NUFIP2Q7Z417 695 aaKnown RBP16.79■□□□□ 0.28
CSPG4P13-201ENST00000565545 DCXRQ7Z4W1 244 aa16.79■□□□□ 0.28
CSPG4P13-201ENST00000565545 YIPF7Q8N8F6 280 aa16.79■□□□□ 0.28
CSPG4P13-201ENST00000565545 MBD3L2Q8NHZ7 208 aaPredicted RBP16.79■□□□□ 0.28
CSPG4P13-201ENST00000565545 ST7LQ8TDW4 575 aa16.79■□□□□ 0.28
CSPG4P13-201ENST00000565545 NABP1Q96AH0 204 aa16.79■□□□□ 0.28
CSPG4P13-201ENST00000565545 ZFP3Q96NJ6 502 aa16.79■□□□□ 0.28
CSPG4P13-201ENST00000565545 EMC7Q9NPA0 242 aa16.79■□□□□ 0.28
CSPG4P13-201ENST00000565545 SLC7A10Q9NS82 523 aa16.79■□□□□ 0.28
CSPG4P13-201ENST00000565545 MRM2Q9UI43 246 aaKnown RBP16.79■□□□□ 0.28
CSPG4P13-201ENST00000565545 IKZF2Q9UKS7 526 aa16.79■□□□□ 0.28
CSPG4P13-201ENST00000565545 ARHGAP21Q5T5U3 1957 aa16.78■□□□□ 0.28
CSPG4P13-201ENST00000565545 PLPP2O43688 288 aa16.78■□□□□ 0.28
CSPG4P13-201ENST00000565545 AIREO43918 545 aa16.78■□□□□ 0.28
CSPG4P13-201ENST00000565545 CNOT4O95628 575 aaKnown RBP16.78■□□□□ 0.28
CSPG4P13-201ENST00000565545 ABHD16AO95870 558 aa16.78■□□□□ 0.28
CSPG4P13-201ENST00000565545 CST2P09228 141 aa16.78■□□□□ 0.28
CSPG4P13-201ENST00000565545 PSKH1P11801 424 aa16.78■□□□□ 0.28
CSPG4P13-201ENST00000565545 CELP19835 753 aa16.78■□□□□ 0.28
CSPG4P13-201ENST00000565545 RPS27P42677 84 aaKnown RBP16.78■□□□□ 0.28
CSPG4P13-201ENST00000565545 ZNF627Q7L945 461 aa16.78■□□□□ 0.28
CSPG4P13-201ENST00000565545 KRT77Q7Z794 578 aa16.78■□□□□ 0.28
CSPG4P13-201ENST00000565545 RNF133Q8WVZ7 376 aa16.78■□□□□ 0.28
CSPG4P13-201ENST00000565545 MARVELD3Q96A59 401 aa16.78■□□□□ 0.28
CSPG4P13-201ENST00000565545 C12orf43Q96C57 262 aaKnown RBP16.78■□□□□ 0.28
CSPG4P13-201ENST00000565545 ALKBH3Q96Q83 286 aaPredicted RBP16.78■□□□□ 0.28
CSPG4P13-201ENST00000565545 COQ7Q99807 217 aa16.78■□□□□ 0.28
CSPG4P13-201ENST00000565545 FOXB1Q99853 325 aa16.78■□□□□ 0.28
CSPG4P13-201ENST00000565545 TTTY10Q9BZA0 68 aa16.78■□□□□ 0.28
CSPG4P13-201ENST00000565545 NAA50Q9GZZ1 169 aaKnown RBP16.78■□□□□ 0.28
CSPG4P13-201ENST00000565545 SLCO1C1Q9NYB5 712 aa16.78■□□□□ 0.28
CSPG4P13-201ENST00000565545 STUB1Q9UNE7 303 aa16.78■□□□□ 0.28
CSPG4P13-201ENST00000565545 LHFPL6Q9Y693 200 aa16.78■□□□□ 0.28
CSPG4P13-201ENST00000565545 DOCK7Q96N67 2140 aa16.78■□□□□ 0.28
CSPG4P13-201ENST00000565545 PRR32B1ATL7 298 aa16.77■□□□□ 0.28
CSPG4P13-201ENST00000565545 H3BMQ9 156 aa16.77■□□□□ 0.28
CSPG4P13-201ENST00000565545 PRRG2O14669 202 aa16.77■□□□□ 0.28
CSPG4P13-201ENST00000565545 OR8G3PP0DMU2 310 aa16.77■□□□□ 0.28
CSPG4P13-201ENST00000565545 EDN3P14138 238 aa16.77■□□□□ 0.28
CSPG4P13-201ENST00000565545 GALP22466 123 aa16.77■□□□□ 0.28
CSPG4P13-201ENST00000565545 GADD45AP24522 165 aa16.77■□□□□ 0.28
CSPG4P13-201ENST00000565545 GABRA5P31644 462 aa16.77■□□□□ 0.28
CSPG4P13-201ENST00000565545 DCTDP32321 178 aa16.77■□□□□ 0.28
CSPG4P13-201ENST00000565545 RIDAP52758 137 aaKnown RBP16.77■□□□□ 0.28
CSPG4P13-201ENST00000565545 SH3BGRP55822 239 aaPredicted RBP16.77■□□□□ 0.28
CSPG4P13-201ENST00000565545 RBPJQ06330 500 aa16.77■□□□□ 0.28
CSPG4P13-201ENST00000565545 AQP6Q13520 282 aa16.77■□□□□ 0.28
CSPG4P13-201ENST00000565545 CTF1Q16619 201 aa16.77■□□□□ 0.28
CSPG4P13-201ENST00000565545 LIPNQ5VXI9 398 aa16.77■□□□□ 0.28
CSPG4P13-201ENST00000565545 FBXW9Q5XUX1 488 aa16.77■□□□□ 0.28
CSPG4P13-201ENST00000565545 DMKNQ6E0U4 476 aaPredicted RBP16.77■□□□□ 0.28
CSPG4P13-201ENST00000565545 ZNF544Q6NX49 715 aa16.77■□□□□ 0.28
CSPG4P13-201ENST00000565545 FDX2Q6P4F2 183 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms