RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 SSBP3Q9BWW4 388 aaPredicted RBP7.57□□□□□ -1.2
VPS9D1-205ENST00000565452 DPAGT1Q9H3H5 408 aa7.57□□□□□ -1.2
VPS9D1-205ENST00000565452 C1orf198Q9H425 327 aa7.57□□□□□ -1.2
VPS9D1-205ENST00000565452 TMEM27Q9HBJ8 222 aa7.57□□□□□ -1.2
VPS9D1-205ENST00000565452 DCAF13Q9NV06 445 aaKnown RBP7.57□□□□□ -1.2
VPS9D1-205ENST00000565452 SAMD4AQ9UPU9 718 aaKnown RBP7.57□□□□□ -1.2
VPS9D1-205ENST00000565452 LRCH1Q9Y2L9 728 aa7.57□□□□□ -1.2
VPS9D1-205ENST00000565452 CHST2Q9Y4C5 530 aa7.57□□□□□ -1.2
VPS9D1-205ENST00000565452 SNX13Q9Y5W8 968 aa7.57□□□□□ -1.2
VPS9D1-205ENST00000565452 COL7A1Q02388 2944 aa7.57□□□□□ -1.2
VPS9D1-205ENST00000565452 IGHV2-70DA0A0C4DH43 119 aa7.56□□□□□ -1.2
VPS9D1-205ENST00000565452 CLDN24A6NM45 220 aa7.56□□□□□ -1.2
VPS9D1-205ENST00000565452 F5H0A9 414 aaPredicted RBP7.56□□□□□ -1.2
VPS9D1-205ENST00000565452 TPST1O60507 370 aa7.56□□□□□ -1.2
VPS9D1-205ENST00000565452 TSPAN9O75954 239 aa7.56□□□□□ -1.2
VPS9D1-205ENST00000565452 WNT2P09544 360 aa7.56□□□□□ -1.2
VPS9D1-205ENST00000565452 UMPSP11172 480 aa7.56□□□□□ -1.2
VPS9D1-205ENST00000565452 CD247P20963 164 aa7.56□□□□□ -1.2
VPS9D1-205ENST00000565452 GTF2E2P29084 291 aaKnown RBP7.56□□□□□ -1.2
VPS9D1-205ENST00000565452 AQP1P29972 269 aa7.56□□□□□ -1.2
VPS9D1-205ENST00000565452 RGS8P57771 180 aaPredicted RBP7.56□□□□□ -1.2
VPS9D1-205ENST00000565452 NCALDP61601 193 aa7.56□□□□□ -1.2
VPS9D1-205ENST00000565452 PAX2Q02962 417 aa7.56□□□□□ -1.2
VPS9D1-205ENST00000565452 EGR3Q06889 387 aa7.56□□□□□ -1.2
VPS9D1-205ENST00000565452 ZNF718Q3SXZ3 478 aa7.56□□□□□ -1.2
VPS9D1-205ENST00000565452 CYBRD1Q53TN4 286 aa7.56□□□□□ -1.2
VPS9D1-205ENST00000565452 SWT1Q5T5J6 900 aaKnown RBP7.56□□□□□ -1.2
VPS9D1-205ENST00000565452 C1orf140Q5VVS0 124 aa7.56□□□□□ -1.2
VPS9D1-205ENST00000565452 ZNF613Q6PF04 617 aa7.56□□□□□ -1.2
VPS9D1-205ENST00000565452 ULK3Q6PHR2 472 aa7.56□□□□□ -1.2
VPS9D1-205ENST00000565452 VASH1Q7L8A9 365 aaPredicted RBP7.56□□□□□ -1.2
VPS9D1-205ENST00000565452 PIWIL3Q7Z3Z3 882 aaKnown RBP7.56□□□□□ -1.2
VPS9D1-205ENST00000565452 C20orf196Q8IYI0 205 aa7.56□□□□□ -1.2
VPS9D1-205ENST00000565452 GALNT4Q8N4A0 578 aa7.56□□□□□ -1.2
VPS9D1-205ENST00000565452 ICA1LQ8NDH6 482 aa7.56□□□□□ -1.2
VPS9D1-205ENST00000565452 MFSD8Q8NHS3 518 aa7.56□□□□□ -1.2
VPS9D1-205ENST00000565452 FAM162AQ96A26 154 aa7.56□□□□□ -1.2
VPS9D1-205ENST00000565452 MCUR1Q96AQ8 359 aa7.56□□□□□ -1.2
VPS9D1-205ENST00000565452 PHF21AQ96BD5 680 aa7.56□□□□□ -1.2
VPS9D1-205ENST00000565452 TAMM41Q96BW9 452 aa7.56□□□□□ -1.2
VPS9D1-205ENST00000565452 ASB9Q96DX5 294 aa7.56□□□□□ -1.2
VPS9D1-205ENST00000565452 PLEKHA8Q96JA3 519 aa7.56□□□□□ -1.2
VPS9D1-205ENST00000565452 NSMCE2Q96MF7 247 aa7.56□□□□□ -1.2
VPS9D1-205ENST00000565452 OR2M2Q96R28 347 aa7.56□□□□□ -1.2
VPS9D1-205ENST00000565452 ARHGDIGQ99819 225 aa7.56□□□□□ -1.2
VPS9D1-205ENST00000565452 THTPAQ9BU02 230 aa7.56□□□□□ -1.2
VPS9D1-205ENST00000565452 SLC19A3Q9BZV2 496 aa7.56□□□□□ -1.2
VPS9D1-205ENST00000565452 TRIM15Q9C019 465 aa7.56□□□□□ -1.2
VPS9D1-205ENST00000565452 PCDHAC1Q9H158 963 aa7.56□□□□□ -1.2
VPS9D1-205ENST00000565452 OR51B6Q9H340 312 aa7.56□□□□□ -1.2
VPS9D1-205ENST00000565452 TMEM106BQ9NUM4 274 aa7.56□□□□□ -1.2
VPS9D1-205ENST00000565452 RLIMQ9NVW2 624 aa7.56□□□□□ -1.2
VPS9D1-205ENST00000565452 SELENONQ9NZV5 590 aa7.56□□□□□ -1.2
VPS9D1-205ENST00000565452 RPS6KB2Q9UBS0 482 aa7.56□□□□□ -1.2
VPS9D1-205ENST00000565452 RYR2Q92736 4967 aa7.56□□□□□ -1.2
VPS9D1-205ENST00000565452 LOC102725191A0A1B0GVB3 256 aa7.55□□□□□ -1.2
VPS9D1-205ENST00000565452 HTR3EA5X5Y0 456 aa7.55□□□□□ -1.2
VPS9D1-205ENST00000565452 K7EIL1 84 aa7.55□□□□□ -1.2
VPS9D1-205ENST00000565452 ADH4P08319 380 aa7.55□□□□□ -1.2
VPS9D1-205ENST00000565452 PATE4P0C8F1 98 aa7.55□□□□□ -1.2
VPS9D1-205ENST00000565452 GKN3PP0CG01 181 aa7.55□□□□□ -1.2
VPS9D1-205ENST00000565452 THRBP10828 461 aa7.55□□□□□ -1.2
VPS9D1-205ENST00000565452 PNMTP11086 282 aa7.55□□□□□ -1.2
VPS9D1-205ENST00000565452 B4GALT1P15291 398 aa7.55□□□□□ -1.2
VPS9D1-205ENST00000565452 TGFBR2P37173 567 aa7.55□□□□□ -1.2
VPS9D1-205ENST00000565452 MDH2P40926 338 aaKnown RBP7.55□□□□□ -1.2
VPS9D1-205ENST00000565452 IER3P46695 156 aa7.55□□□□□ -1.2
VPS9D1-205ENST00000565452 MMP15P51511 669 aa7.55□□□□□ -1.2
VPS9D1-205ENST00000565452 BTG1P62324 171 aa7.55□□□□□ -1.2
VPS9D1-205ENST00000565452 GNB2P62879 340 aa7.55□□□□□ -1.2
VPS9D1-205ENST00000565452 GLO1Q04760 184 aa7.55□□□□□ -1.2
VPS9D1-205ENST00000565452 PMS2P3Q13401 168 aa7.55□□□□□ -1.2
VPS9D1-205ENST00000565452 MFSD13AQ14CX5 517 aa7.55□□□□□ -1.2
VPS9D1-205ENST00000565452 TBC1D28Q2M2D7 210 aa7.55□□□□□ -1.2
VPS9D1-205ENST00000565452 LRRC23Q53EV4 343 aaPredicted RBP7.55□□□□□ -1.2
VPS9D1-205ENST00000565452 IFI44LQ53G44 452 aa7.55□□□□□ -1.2
VPS9D1-205ENST00000565452 PHYHD1Q5SRE7 291 aa7.55□□□□□ -1.2
VPS9D1-205ENST00000565452 CARD17Q5XLA6 110 aa7.55□□□□□ -1.2
VPS9D1-205ENST00000565452 DHRS7BQ6IAN0 325 aaPredicted RBP7.55□□□□□ -1.2
VPS9D1-205ENST00000565452 LCN8Q6JVE9 175 aa7.55□□□□□ -1.2
VPS9D1-205ENST00000565452 UNQ6126/PRO20091Q6UXV3 157 aa7.55□□□□□ -1.2
VPS9D1-205ENST00000565452 FKBP9P1Q75LS8 142 aa7.55□□□□□ -1.2
VPS9D1-205ENST00000565452 DHFR2Q86XF0 187 aa7.55□□□□□ -1.2
VPS9D1-205ENST00000565452 ZNF584Q8IVC4 421 aa7.55□□□□□ -1.2
VPS9D1-205ENST00000565452 C10orf67Q8IYJ2 551 aa7.55□□□□□ -1.2
VPS9D1-205ENST00000565452 TMEM123Q8N131 208 aa7.55□□□□□ -1.2
VPS9D1-205ENST00000565452 MUC20Q8N307 709 aaPredicted RBP7.55□□□□□ -1.2
VPS9D1-205ENST00000565452 RNF148Q8N7C7 305 aa7.55□□□□□ -1.2
VPS9D1-205ENST00000565452 SMYD1Q8NB12 490 aa7.55□□□□□ -1.2
VPS9D1-205ENST00000565452 OR1J1Q8NGS3 322 aa7.55□□□□□ -1.2
VPS9D1-205ENST00000565452 STK35Q8TDR2 534 aa7.55□□□□□ -1.2
VPS9D1-205ENST00000565452 GEMIN6Q8WXD5 167 aaKnown RBP7.55□□□□□ -1.2
VPS9D1-205ENST00000565452 GATAD2BQ8WXI9 593 aa7.55□□□□□ -1.2
VPS9D1-205ENST00000565452 SLC38A4Q969I6 547 aa7.55□□□□□ -1.2
VPS9D1-205ENST00000565452 PYURFQ96I23 114 aa7.55□□□□□ -1.2
VPS9D1-205ENST00000565452 MPP4Q96JB8 637 aa7.55□□□□□ -1.2
VPS9D1-205ENST00000565452 MCHR1Q99705 422 aa7.55□□□□□ -1.2
VPS9D1-205ENST00000565452 NUDT16L1Q9BRJ7 211 aaKnown RBP7.55□□□□□ -1.2
VPS9D1-205ENST00000565452 RNF121Q9H920 327 aa7.55□□□□□ -1.2
VPS9D1-205ENST00000565452 ACOXLQ9NUZ1 547 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms