RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 PDXPQ96GD0 296 aa2.69□□□□□ -1.98
CHD9-215ENST00000565442 DNAJC1Q96KC8 554 aaKnown RBP2.69□□□□□ -1.98
CHD9-215ENST00000565442 TGS1Q96RS0 853 aaKnown RBP2.69□□□□□ -1.98
CHD9-215ENST00000565442 MICU1Q9BPX6 476 aa2.69□□□□□ -1.98
CHD9-215ENST00000565442 RPP21Q9H633 154 aaKnown RBP2.69□□□□□ -1.98
CHD9-215ENST00000565442 BEX1Q9HBH7 125 aa2.69□□□□□ -1.98
CHD9-215ENST00000565442 RETNQ9HD89 108 aa2.69□□□□□ -1.98
CHD9-215ENST00000565442 CCDC59Q9P031 241 aaKnown RBP2.69□□□□□ -1.98
CHD9-215ENST00000565442 DUX4Q9UBX2 424 aa2.69□□□□□ -1.98
CHD9-215ENST00000565442 MYO10Q9HD67 2058 aa2.69□□□□□ -1.98
CHD9-215ENST00000565442 IGLV1-36A0A0B4J1U3 117 aa2.68□□□□□ -1.98
CHD9-215ENST00000565442 TRBV9A0A0B4J1U6 114 aa2.68□□□□□ -1.98
CHD9-215ENST00000565442 LYRM9A8MSI8 78 aa2.68□□□□□ -1.98
CHD9-215ENST00000565442 TEX46H3BTG2 121 aa2.68□□□□□ -1.98
CHD9-215ENST00000565442 NDUFAB1O14561 156 aa2.68□□□□□ -1.98
CHD9-215ENST00000565442 HUS1O60921 280 aa2.68□□□□□ -1.98
CHD9-215ENST00000565442 DNAJB6O75190 326 aa2.68□□□□□ -1.98
CHD9-215ENST00000565442 RDH16O75452 317 aa2.68□□□□□ -1.98
CHD9-215ENST00000565442 CLDN11O75508 207 aa2.68□□□□□ -1.98
CHD9-215ENST00000565442 EIF4EP06730 217 aaKnown RBP2.68□□□□□ -1.98
CHD9-215ENST00000565442 SERPINE2P07093 398 aa2.68□□□□□ -1.98
CHD9-215ENST00000565442 TPM2P07951 284 aa2.68□□□□□ -1.98
CHD9-215ENST00000565442 UQCRFS1P47985 274 aa2.68□□□□□ -1.98
CHD9-215ENST00000565442 ARG2P78540 354 aa2.68□□□□□ -1.98
CHD9-215ENST00000565442 MERTKQ12866 999 aa2.68□□□□□ -1.98
CHD9-215ENST00000565442 PON2Q15165 354 aa2.68□□□□□ -1.98
CHD9-215ENST00000565442 STK11Q15831 433 aa2.68□□□□□ -1.98
CHD9-215ENST00000565442 UBE2SQ16763 222 aa2.68□□□□□ -1.98
CHD9-215ENST00000565442 METTL21CQ5VZV1 264 aa2.68□□□□□ -1.98
CHD9-215ENST00000565442 ZNF695Q8IW36 515 aa2.68□□□□□ -1.98
CHD9-215ENST00000565442 PRSS58Q8IYP2 241 aa2.68□□□□□ -1.98
CHD9-215ENST00000565442 NOXO1Q8NFA2 376 aa2.68□□□□□ -1.98
CHD9-215ENST00000565442 NRGNQ92686 78 aa2.68□□□□□ -1.98
CHD9-215ENST00000565442 PRRC1Q96M27 445 aa2.68□□□□□ -1.98
CHD9-215ENST00000565442 ZNF681Q96N22 645 aa2.68□□□□□ -1.98
CHD9-215ENST00000565442 NDFIP1Q9BT67 221 aa2.68□□□□□ -1.98
CHD9-215ENST00000565442 PARP12Q9H0J9 701 aaKnown RBP2.68□□□□□ -1.98
CHD9-215ENST00000565442 C12orf10Q9HB07 376 aa2.68□□□□□ -1.98
CHD9-215ENST00000565442 FAM49BQ9NUQ9 324 aa2.68□□□□□ -1.98
CHD9-215ENST00000565442 CTSFQ9UBX1 484 aa2.68□□□□□ -1.98
CHD9-215ENST00000565442 SLC17A4Q9Y2C5 497 aa2.68□□□□□ -1.98
CHD9-215ENST00000565442 KCNE3Q9Y6H6 103 aa2.68□□□□□ -1.98
CHD9-215ENST00000565442 GPATCH8Q9UKJ3 1502 aaKnown RBP2.68□□□□□ -1.98
CHD9-215ENST00000565442 IGKV2-28A0A075B6P5 120 aa2.67□□□□□ -1.98
CHD9-215ENST00000565442 IGHV5-10-1A0A0J9YXX1 117 aa2.67□□□□□ -1.98
CHD9-215ENST00000565442 SMKR1H3BMG3 65 aa2.67□□□□□ -1.98
CHD9-215ENST00000565442 IGKV2D-28P01615 120 aa2.67□□□□□ -1.98
CHD9-215ENST00000565442 UBTFL6P0CB48 400 aaPredicted RBP2.67□□□□□ -1.98
CHD9-215ENST00000565442 IGFBP3P17936 291 aaPredicted RBP2.67□□□□□ -1.98
CHD9-215ENST00000565442 SP4Q02446 784 aa2.67□□□□□ -1.98
CHD9-215ENST00000565442 TRAM2Q15035 370 aa2.67□□□□□ -1.98
CHD9-215ENST00000565442 PSMD5Q16401 504 aa2.67□□□□□ -1.98
CHD9-215ENST00000565442 SNRNP35Q16560 246 aaKnown RBP2.67□□□□□ -1.98
CHD9-215ENST00000565442 GPR107Q5VW38 600 aa2.67□□□□□ -1.98
CHD9-215ENST00000565442 FAM71E1Q6IPT2 247 aa2.67□□□□□ -1.98
CHD9-215ENST00000565442 TMEM220Q6QAJ8 160 aa2.67□□□□□ -1.98
CHD9-215ENST00000565442 BZW1Q7L1Q6 419 aaKnown RBP2.67□□□□□ -1.98
CHD9-215ENST00000565442 RIMKLAQ8IXN7 391 aa2.67□□□□□ -1.98
CHD9-215ENST00000565442 OR2L8Q8NGY9 312 aa2.67□□□□□ -1.98
CHD9-215ENST00000565442 UBALD1Q8TB05 177 aa2.67□□□□□ -1.98
CHD9-215ENST00000565442 LRRC29Q8WV35 223 aa2.67□□□□□ -1.98
CHD9-215ENST00000565442 BPIFA3Q9BQP9 254 aa2.67□□□□□ -1.98
CHD9-215ENST00000565442 LCE3DQ9BYE3 92 aa2.67□□□□□ -1.98
CHD9-215ENST00000565442 SPNS1Q9H2V7 528 aa2.67□□□□□ -1.98
CHD9-215ENST00000565442 SYNDIG1Q9H7V2 258 aa2.67□□□□□ -1.98
CHD9-215ENST00000565442 ZNF430Q9H8G1 570 aaPredicted RBP2.67□□□□□ -1.98
CHD9-215ENST00000565442 TMEM165Q9HC07 324 aa2.67□□□□□ -1.98
CHD9-215ENST00000565442 ZDHHC4Q9NPG8 344 aa2.67□□□□□ -1.98
CHD9-215ENST00000565442 CYTL1Q9NRR1 136 aa2.67□□□□□ -1.98
CHD9-215ENST00000565442 LYARQ9NX58 379 aaKnown RBP2.67□□□□□ -1.98
CHD9-215ENST00000565442 TRMT112Q9UI30 125 aaKnown RBP2.67□□□□□ -1.98
CHD9-215ENST00000565442 YTHDF2Q9Y5A9 579 aaKnown RBP2.67□□□□□ -1.98
CHD9-215ENST00000565442 L7N2F9 121 aa2.66□□□□□ -1.98
CHD9-215ENST00000565442 SCAMP2O15127 329 aaKnown RBP2.66□□□□□ -1.98
CHD9-215ENST00000565442 RP2O75695 350 aa2.66□□□□□ -1.98
CHD9-215ENST00000565442 ARG1P05089 322 aa2.66□□□□□ -1.98
CHD9-215ENST00000565442 ERCC1P07992 297 aaPredicted RBP2.66□□□□□ -1.98
CHD9-215ENST00000565442 IGHV1-8P0DP01 117 aa2.66□□□□□ -1.98
CHD9-215ENST00000565442 WARSP23381 471 aaKnown RBP2.66□□□□□ -1.98
CHD9-215ENST00000565442 MRPL19P49406 292 aaKnown RBP2.66□□□□□ -1.98
CHD9-215ENST00000565442 VSX2P58304 361 aaPredicted RBP2.66□□□□□ -1.98
CHD9-215ENST00000565442 ESRRGP62508 458 aa2.66□□□□□ -1.98
CHD9-215ENST00000565442 GBE1Q04446 702 aa2.66□□□□□ -1.98
CHD9-215ENST00000565442 SYCNQ0VAF6 134 aa2.66□□□□□ -1.98
CHD9-215ENST00000565442 CDH17Q12864 832 aa2.66□□□□□ -1.98
CHD9-215ENST00000565442 TWF2Q6IBS0 349 aaKnown RBP2.66□□□□□ -1.98
CHD9-215ENST00000565442 NANOGP8Q6NSW7 305 aa2.66□□□□□ -1.98
CHD9-215ENST00000565442 TTC23LQ6PF05 361 aa2.66□□□□□ -1.98
CHD9-215ENST00000565442 C12orf54Q6X4T0 127 aa2.66□□□□□ -1.98
CHD9-215ENST00000565442 SCD5Q86SK9 330 aa2.66□□□□□ -1.98
CHD9-215ENST00000565442 GABRG1Q8N1C3 465 aa2.66□□□□□ -1.98
CHD9-215ENST00000565442 METTL13Q8N6R0 699 aa2.66□□□□□ -1.98
CHD9-215ENST00000565442 SYNPRQ8TBG9 265 aa2.66□□□□□ -1.98
CHD9-215ENST00000565442 NTAN1Q96AB6 310 aa2.66□□□□□ -1.98
CHD9-215ENST00000565442 RBMXL1Q96E39 390 aaKnown RBP2.66□□□□□ -1.98
CHD9-215ENST00000565442 COL21A1Q96P44 957 aa2.66□□□□□ -1.98
CHD9-215ENST00000565442 GSDMAQ96QA5 445 aa2.66□□□□□ -1.98
CHD9-215ENST00000565442 C11orf70Q9BRQ4 267 aa2.66□□□□□ -1.98
CHD9-215ENST00000565442 SAV1Q9H4B6 383 aaPredicted RBP2.66□□□□□ -1.98
CHD9-215ENST00000565442 UBE2ZQ9H832 354 aaPredicted RBP2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms