RNA–Protein interactions for RNA: ENST00000565228.1

VPS35-206, Transcript of VPS35, retromer complex component, humanhuman

TSL 3

Gene VPS35, Length 487 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35-206ENST00000565228 CIB1Q99828 191 aa7.93□□□□□ -1.14
VPS35-206ENST00000565228 OSBPL10Q9BXB5 764 aa7.93□□□□□ -1.14
VPS35-206ENST00000565228 SLC25A19Q9HC21 320 aa7.93□□□□□ -1.14
VPS35-206ENST00000565228 CMC2Q9NRP2 79 aa7.93□□□□□ -1.14
VPS35-206ENST00000565228 CA10Q9NS85 328 aa7.93□□□□□ -1.14
VPS35-206ENST00000565228 STX18Q9P2W9 335 aaKnown RBP7.93□□□□□ -1.14
VPS35-206ENST00000565228 ASH2LQ9UBL3 628 aa7.93□□□□□ -1.14
VPS35-206ENST00000565228 FKBP7Q9Y680 259 aa7.93□□□□□ -1.14
VPS35-206ENST00000565228 ZANQ9Y493 2812 aa7.93□□□□□ -1.14
VPS35-206ENST00000565228 FLNAP21333 2647 aaKnown RBP7.93□□□□□ -1.14
VPS35-206ENST00000565228 OR6C6A6NF89 314 aa7.92□□□□□ -1.14
VPS35-206ENST00000565228 ZAR1LA6NP61 321 aa7.92□□□□□ -1.14
VPS35-206ENST00000565228 G3V2T6 193 aa7.92□□□□□ -1.14
VPS35-206ENST00000565228 PRKYO43930 277 aa7.92□□□□□ -1.14
VPS35-206ENST00000565228 SMPD2O60906 423 aa7.92□□□□□ -1.14
VPS35-206ENST00000565228 RAB36O95755 333 aa7.92□□□□□ -1.14
VPS35-206ENST00000565228 OR4A8P0C604 315 aa7.92□□□□□ -1.14
VPS35-206ENST00000565228 ANXA8P13928 327 aa7.92□□□□□ -1.14
VPS35-206ENST00000565228 ZNF23P17027 643 aa7.92□□□□□ -1.14
VPS35-206ENST00000565228 DNASE1P24855 282 aa7.92□□□□□ -1.14
VPS35-206ENST00000565228 GRK5P34947 590 aa7.92□□□□□ -1.14
VPS35-206ENST00000565228 MPV17P39210 176 aa7.92□□□□□ -1.14
VPS35-206ENST00000565228 FABP6P51161 128 aa7.92□□□□□ -1.14
VPS35-206ENST00000565228 SLC25A1P53007 311 aa7.92□□□□□ -1.14
VPS35-206ENST00000565228 CRISP1P54107 249 aa7.92□□□□□ -1.14
VPS35-206ENST00000565228 PRSS12P56730 875 aa7.92□□□□□ -1.14
VPS35-206ENST00000565228 TEKQ02763 1124 aa7.92□□□□□ -1.14
VPS35-206ENST00000565228 HSF2Q03933 536 aa7.92□□□□□ -1.14
VPS35-206ENST00000565228 SNTB2Q13425 540 aaKnown RBP7.92□□□□□ -1.14
VPS35-206ENST00000565228 MAD2L1BPQ15013 274 aaPredicted RBP7.92□□□□□ -1.14
VPS35-206ENST00000565228 PTGES3Q15185 160 aaKnown RBP7.92□□□□□ -1.14
VPS35-206ENST00000565228 SLC36A2Q495M3 483 aa7.92□□□□□ -1.14
VPS35-206ENST00000565228 SPRNQ5BIV9 151 aa7.92□□□□□ -1.14
VPS35-206ENST00000565228 C1QTNF12Q5T7M4 302 aa7.92□□□□□ -1.14
VPS35-206ENST00000565228 C12orf73Q69YU5 71 aa7.92□□□□□ -1.14
VPS35-206ENST00000565228 SLC18B1Q6NT16 456 aa7.92□□□□□ -1.14
VPS35-206ENST00000565228 RPL13AP3Q6NVV1 102 aa7.92□□□□□ -1.14
VPS35-206ENST00000565228 DNM1P46Q6ZS02 220 aa7.92□□□□□ -1.14
VPS35-206ENST00000565228 SSX8Q7RTT4 187 aa7.92□□□□□ -1.14
VPS35-206ENST00000565228 JAZF1Q86VZ6 243 aa7.92□□□□□ -1.14
VPS35-206ENST00000565228 MUC15Q8N387 334 aa7.92□□□□□ -1.14
VPS35-206ENST00000565228 PARP8Q8N3A8 854 aa7.92□□□□□ -1.14
VPS35-206ENST00000565228 ATG16L2Q8NAA4 619 aa7.92□□□□□ -1.14
VPS35-206ENST00000565228 ICA1LQ8NDH6 482 aa7.92□□□□□ -1.14
VPS35-206ENST00000565228 OR2T33Q8NG76 320 aa7.92□□□□□ -1.14
VPS35-206ENST00000565228 OR52L1Q8NGH7 329 aa7.92□□□□□ -1.14
VPS35-206ENST00000565228 CENPNQ96H22 339 aaPredicted RBP7.92□□□□□ -1.14
VPS35-206ENST00000565228 CACNG6Q9BXT2 260 aa7.92□□□□□ -1.14
VPS35-206ENST00000565228 GSX2Q9BZM3 304 aa7.92□□□□□ -1.14
VPS35-206ENST00000565228 RNF121Q9H920 327 aa7.92□□□□□ -1.14
VPS35-206ENST00000565228 DLL4Q9NR61 685 aa7.92□□□□□ -1.14
VPS35-206ENST00000565228 PAPOLBQ9NRJ5 636 aaKnown RBP7.92□□□□□ -1.14
VPS35-206ENST00000565228 BEX4Q9NWD9 120 aaPredicted RBP7.92□□□□□ -1.14
VPS35-206ENST00000565228 AASSQ9UDR5 926 aa7.92□□□□□ -1.14
VPS35-206ENST00000565228 CYB5R1Q9UHQ9 305 aa7.92□□□□□ -1.14
VPS35-206ENST00000565228 POU2F3Q9UKI9 436 aa7.92□□□□□ -1.14
VPS35-206ENST00000565228 KLHDC2Q9Y2U9 406 aa7.92□□□□□ -1.14
VPS35-206ENST00000565228 COMMD3-BMI1R4GMX3 469 aa7.92□□□□□ -1.14
VPS35-206ENST00000565228 SVEP1Q4LDE5 3571 aa7.91□□□□□ -1.14
VPS35-206ENST00000565228 ABCA2Q9BZC7 2435 aa7.91□□□□□ -1.14
VPS35-206ENST00000565228 A0A096LNT2 108 aa7.91□□□□□ -1.14
VPS35-206ENST00000565228 TRIM64A6NGJ6 449 aa7.91□□□□□ -1.14
VPS35-206ENST00000565228 TRIM64BA6NI03 449 aa7.91□□□□□ -1.14
VPS35-206ENST00000565228 H3BN98 237 aa7.91□□□□□ -1.14
VPS35-206ENST00000565228 EI24O14681 340 aa7.91□□□□□ -1.14
VPS35-206ENST00000565228 FARS2O95363 451 aaKnown RBP7.91□□□□□ -1.14
VPS35-206ENST00000565228 RENP00797 406 aa7.91□□□□□ -1.14
VPS35-206ENST00000565228 CRYAAP02489 173 aa7.91□□□□□ -1.14
VPS35-206ENST00000565228 ALPLP05186 524 aa7.91□□□□□ -1.14
VPS35-206ENST00000565228 STOMP27105 288 aa7.91□□□□□ -1.14
VPS35-206ENST00000565228 APOBEC3AP31941 199 aaPredicted RBP7.91□□□□□ -1.14
VPS35-206ENST00000565228 CENPAP49450 140 aa7.91□□□□□ -1.14
VPS35-206ENST00000565228 HCCSP53701 268 aa7.91□□□□□ -1.14
VPS35-206ENST00000565228 LSM6P62312 80 aaKnown RBP7.91□□□□□ -1.14
VPS35-206ENST00000565228 DAG1Q14118 895 aa7.91□□□□□ -1.14
VPS35-206ENST00000565228 ZSCAN26Q16670 478 aa7.91□□□□□ -1.14
VPS35-206ENST00000565228 PCK2Q16822 640 aa7.91□□□□□ -1.14
VPS35-206ENST00000565228 SPATA46Q5T0L3 261 aa7.91□□□□□ -1.14
VPS35-206ENST00000565228 SLX4IPQ5VYV7 408 aa7.91□□□□□ -1.14
VPS35-206ENST00000565228 ZNF544Q6NX49 715 aa7.91□□□□□ -1.14
VPS35-206ENST00000565228 TMEM53Q6P2H8 277 aa7.91□□□□□ -1.14
VPS35-206ENST00000565228 PLBD1Q6P4A8 553 aa7.91□□□□□ -1.14
VPS35-206ENST00000565228 HIPK1Q86Z02 1210 aa7.91□□□□□ -1.14
VPS35-206ENST00000565228 CPOQ8IVL8 374 aa7.91□□□□□ -1.14
VPS35-206ENST00000565228 SVOPLQ8N434 492 aa7.91□□□□□ -1.14
VPS35-206ENST00000565228 TEX47Q8TBZ9 253 aa7.91□□□□□ -1.14
VPS35-206ENST00000565228 FNDC8Q8TC99 324 aa7.91□□□□□ -1.14
VPS35-206ENST00000565228 NANOS1Q8WY41 292 aaKnown RBP7.91□□□□□ -1.14
VPS35-206ENST00000565228 SORCS2Q96PQ0 1159 aa7.91□□□□□ -1.14
VPS35-206ENST00000565228 MBOAT4Q96T53 435 aa7.91□□□□□ -1.14
VPS35-206ENST00000565228 SYT3Q9BQG1 590 aa7.91□□□□□ -1.14
VPS35-206ENST00000565228 GRIP2Q9C0E4 1043 aa7.91□□□□□ -1.14
VPS35-206ENST00000565228 PLK3Q9H4B4 646 aa7.91□□□□□ -1.14
VPS35-206ENST00000565228 ZNF442Q9H7R0 627 aa7.91□□□□□ -1.14
VPS35-206ENST00000565228 YY1AP1Q9H869 796 aa7.91□□□□□ -1.14
VPS35-206ENST00000565228 MARCH7Q9H992 704 aa7.91□□□□□ -1.14
VPS35-206ENST00000565228 CBLN4Q9NTU7 201 aa7.91□□□□□ -1.14
VPS35-206ENST00000565228 CSPG4Q6UVK1 2322 aa7.91□□□□□ -1.14
VPS35-206ENST00000565228 C5orf49A4QMS7 147 aa7.9□□□□□ -1.14
VPS35-206ENST00000565228 DOK2O60496 412 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms