RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 NCR1O76036 304 aa17.3■□□□□ 0.36
CLN6-205ENST00000564846 CPN1P15169 458 aa17.3■□□□□ 0.36
CLN6-205ENST00000564846 ZNF24P17028 368 aa17.3■□□□□ 0.36
CLN6-205ENST00000564846 KIR3DL2P43630 455 aa17.3■□□□□ 0.36
CLN6-205ENST00000564846 PPP5CP53041 499 aa17.3■□□□□ 0.36
CLN6-205ENST00000564846 DDI2Q5TDH0 399 aa17.3■□□□□ 0.36
CLN6-205ENST00000564846 CATSPERDQ86XM0 798 aa17.3■□□□□ 0.36
CLN6-205ENST00000564846 ZADH2Q8N4Q0 377 aa17.3■□□□□ 0.36
CLN6-205ENST00000564846 DERL3Q96Q80 235 aa17.3■□□□□ 0.36
CLN6-205ENST00000564846 ATF6BQ99941 703 aa17.3■□□□□ 0.36
CLN6-205ENST00000564846 RBM24Q9BX46 236 aaKnown RBP17.3■□□□□ 0.36
CLN6-205ENST00000564846 NOX4Q9NPH5 578 aa17.3■□□□□ 0.36
CLN6-205ENST00000564846 B3GAT2Q9NPZ5 323 aa17.3■□□□□ 0.36
CLN6-205ENST00000564846 EMC3Q9P0I2 261 aa17.3■□□□□ 0.36
CLN6-205ENST00000564846 ASH2LQ9UBL3 628 aa17.3■□□□□ 0.36
CLN6-205ENST00000564846 A0A1W2PPK0 400 aa17.29■□□□□ 0.36
CLN6-205ENST00000564846 RAF1P04049 648 aa17.29■□□□□ 0.36
CLN6-205ENST00000564846 OCM2P0CE71 109 aa17.29■□□□□ 0.36
CLN6-205ENST00000564846 SPINK2P20155 84 aa17.29■□□□□ 0.36
CLN6-205ENST00000564846 RAB3BP20337 219 aa17.29■□□□□ 0.36
CLN6-205ENST00000564846 TNFSF8P32971 234 aa17.29■□□□□ 0.36
CLN6-205ENST00000564846 NTF4P34130 210 aa17.29■□□□□ 0.36
CLN6-205ENST00000564846 MMP16P51512 607 aa17.29■□□□□ 0.36
CLN6-205ENST00000564846 MFGE8Q08431 387 aaPredicted RBP17.29■□□□□ 0.36
CLN6-205ENST00000564846 SGCAQ16586 387 aa17.29■□□□□ 0.36
CLN6-205ENST00000564846 RIPPLY2Q5TAB7 128 aa17.29■□□□□ 0.36
CLN6-205ENST00000564846 IGFL3Q6UXB1 125 aa17.29■□□□□ 0.36
CLN6-205ENST00000564846 CHMP1BQ7LBR1 199 aa17.29■□□□□ 0.36
CLN6-205ENST00000564846 IL17RDQ8NFM7 739 aa17.29■□□□□ 0.36
CLN6-205ENST00000564846 ACOT12Q8WYK0 555 aa17.29■□□□□ 0.36
CLN6-205ENST00000564846 KCTD12Q96CX2 325 aaKnown RBP17.29■□□□□ 0.36
CLN6-205ENST00000564846 SLC30A2Q9BRI3 323 aa17.29■□□□□ 0.36
CLN6-205ENST00000564846 ACOD1A6NK06 481 aa17.28■□□□□ 0.36
CLN6-205ENST00000564846 ZNF878C9JN71 531 aa17.28■□□□□ 0.36
CLN6-205ENST00000564846 SRMP19623 302 aa17.28■□□□□ 0.36
CLN6-205ENST00000564846 NPR2P20594 1047 aa17.28■□□□□ 0.36
CLN6-205ENST00000564846 MRPS34P82930 218 aaKnown RBP17.28■□□□□ 0.36
CLN6-205ENST00000564846 MZT2AQ6P582 158 aa17.28■□□□□ 0.36
CLN6-205ENST00000564846 KLHL24Q6TFL4 600 aa17.28■□□□□ 0.36
CLN6-205ENST00000564846 CFAP77Q6ZQR2 320 aa17.28■□□□□ 0.36
CLN6-205ENST00000564846 BTLAQ7Z6A9 289 aa17.28■□□□□ 0.36
CLN6-205ENST00000564846 NR2C2APQ86WQ0 139 aa17.28■□□□□ 0.36
CLN6-205ENST00000564846 GPR137CQ8N3F9 429 aa17.28■□□□□ 0.36
CLN6-205ENST00000564846 PARP16Q8N5Y8 322 aa17.28■□□□□ 0.36
CLN6-205ENST00000564846 OR10S1Q8NGN2 331 aa17.28■□□□□ 0.36
CLN6-205ENST00000564846 NABP1Q96AH0 204 aa17.28■□□□□ 0.36
CLN6-205ENST00000564846 PRRG4Q9BZD6 226 aa17.28■□□□□ 0.36
CLN6-205ENST00000564846 NIPAL2Q9H841 368 aa17.28■□□□□ 0.36
CLN6-205ENST00000564846 RNF122Q9H9V4 155 aa17.28■□□□□ 0.36
CLN6-205ENST00000564846 FBXL3Q9UKT7 428 aa17.28■□□□□ 0.36
CLN6-205ENST00000564846 GTF2A1LQ9UNN4 478 aa17.28■□□□□ 0.36
CLN6-205ENST00000564846 EMC9Q9Y3B6 208 aa17.28■□□□□ 0.36
CLN6-205ENST00000564846 A0A087WV48 116 aa17.28■□□□□ 0.36
CLN6-205ENST00000564846 TMEM269A0A1B0GVZ9 245 aa17.28■□□□□ 0.36
CLN6-205ENST00000564846 LOC110117498-PIK3R3F6TDL0 507 aa17.28■□□□□ 0.36
CLN6-205ENST00000564846 PIN1P1O15428 100 aa17.28■□□□□ 0.36
CLN6-205ENST00000564846 PMP22Q01453 160 aa17.28■□□□□ 0.36
CLN6-205ENST00000564846 SFXN4Q6P4A7 337 aa17.28■□□□□ 0.36
CLN6-205ENST00000564846 LAX1Q8IWV1 398 aa17.28■□□□□ 0.36
CLN6-205ENST00000564846 CPT1CQ8TCG5 803 aa17.28■□□□□ 0.36
CLN6-205ENST00000564846 ZNF416Q9BWM5 594 aa17.28■□□□□ 0.36
CLN6-205ENST00000564846 ABCB9Q9NP78 766 aa17.28■□□□□ 0.36
CLN6-205ENST00000564846 PARPBPQ9NWS1 579 aa17.28■□□□□ 0.36
CLN6-205ENST00000564846 WASF3Q9UPY6 502 aa17.28■□□□□ 0.36
CLN6-205ENST00000564846 SLC22A13Q9Y226 551 aa17.28■□□□□ 0.36
CLN6-205ENST00000564846 SSUH2Q9Y2M2 353 aa17.28■□□□□ 0.36
CLN6-205ENST00000564846 NOSIPQ9Y314 301 aaKnown RBP17.28■□□□□ 0.36
CLN6-205ENST00000564846 PCDHGA9Q9Y5G4 932 aaKnown RBP17.28■□□□□ 0.36
CLN6-205ENST00000564846 PDCD5O14737 125 aa17.27■□□□□ 0.35
CLN6-205ENST00000564846 IGHG3P01860 377 aa17.27■□□□□ 0.35
CLN6-205ENST00000564846 PPP3R1P63098 170 aa17.27■□□□□ 0.35
CLN6-205ENST00000564846 RNPS1Q15287 305 aaKnown RBP17.27■□□□□ 0.35
CLN6-205ENST00000564846 ZNF704Q6ZNC4 412 aaPredicted RBP17.27■□□□□ 0.35
CLN6-205ENST00000564846 RDH10Q8IZV5 341 aa17.27■□□□□ 0.35
CLN6-205ENST00000564846 FNDC9Q8TBE3 224 aa17.27■□□□□ 0.35
CLN6-205ENST00000564846 WDYHV1Q96HA8 205 aa17.27■□□□□ 0.35
CLN6-205ENST00000564846 BCO1Q9HAY6 547 aa17.27■□□□□ 0.35
CLN6-205ENST00000564846 CRLF2Q9HC73 371 aa17.27■□□□□ 0.35
CLN6-205ENST00000564846 SPRR3Q9UBC9 169 aa17.27■□□□□ 0.35
CLN6-205ENST00000564846 OR52A1Q9UKL2 312 aa17.27■□□□□ 0.35
CLN6-205ENST00000564846 A0A0G2JK05 382 aa17.26■□□□□ 0.35
CLN6-205ENST00000564846 ZNF724A8MTY0 619 aa17.26■□□□□ 0.35
CLN6-205ENST00000564846 MRPL33O75394 65 aaKnown RBP17.26■□□□□ 0.35
CLN6-205ENST00000564846 OR10A3P58181 314 aa17.26■□□□□ 0.35
CLN6-205ENST00000564846 IDNKQ5T6J7 187 aa17.26■□□□□ 0.35
CLN6-205ENST00000564846 FAM27BQ5VT28 67 aa17.26■□□□□ 0.35
CLN6-205ENST00000564846 GJC3Q8NFK1 279 aa17.26■□□□□ 0.35
CLN6-205ENST00000564846 HTRA1Q92743 480 aa17.26■□□□□ 0.35
CLN6-205ENST00000564846 SLITRK2Q9H156 845 aa17.26■□□□□ 0.35
CLN6-205ENST00000564846 MIXL1Q9H2W2 232 aa17.26■□□□□ 0.35
CLN6-205ENST00000564846 G6PC2Q9NQR9 355 aa17.26■□□□□ 0.35
CLN6-205ENST00000564846 COMMD3Q9UBI1 195 aa17.26■□□□□ 0.35
CLN6-205ENST00000564846 MSRB2Q9Y3D2 182 aa17.26■□□□□ 0.35
CLN6-205ENST00000564846 TRBV5-7A0A0A0MS05 114 aa17.25■□□□□ 0.35
CLN6-205ENST00000564846 OR6C65A6NJZ3 312 aa17.25■□□□□ 0.35
CLN6-205ENST00000564846 NOTOA8MTQ0 251 aa17.25■□□□□ 0.35
CLN6-205ENST00000564846 RER1O15258 196 aa17.25■□□□□ 0.35
CLN6-205ENST00000564846 ISG15P05161 165 aa17.25■□□□□ 0.35
CLN6-205ENST00000564846 HSD11B1P28845 292 aa17.25■□□□□ 0.35
CLN6-205ENST00000564846 ENDOGQ14249 297 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms