RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 MRPL19P49406 292 aaKnown RBP3.05□□□□□ -1.92
CHD9-213ENST00000564845 SRSF6Q13247 344 aaKnown RBP3.05□□□□□ -1.92
CHD9-213ENST00000564845 RPE65Q16518 533 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 MEP1BQ16820 701 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 DUOXA1Q1HG43 343 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 SIGIRRQ6IA17 410 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 ADAMTSL4Q6UY14 1074 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 DTX1Q86Y01 620 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 TOMM5Q8N4H5 51 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 BEST4Q8NFU0 473 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 ROBO4Q8WZ75 1007 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 UHRF2Q96PU4 802 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 ZNF251Q9BRH9 671 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 PIGMQ9H3S5 423 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 CUTCQ9NTM9 273 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 FLNCQ14315 2725 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 DHRS7CA6NNS2 312 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 ANKRD30BLA7E2S9 258 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 FGF17O60258 216 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 SLCO2B1O94956 709 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 GP1BAP07359 652 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 TSPAN7P41732 249 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 EGR3Q06889 387 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 PDE7AQ13946 482 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 ACSM5Q6NUN0 579 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 CD163Q86VB7 1156 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 LGI4Q8N135 537 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 SLC25A36Q96CQ1 311 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 ZFYVE21Q9BQ24 234 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 SEMA4GQ9NTN9 838 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 RARRES3Q9UL19 164 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 TRBC2A0A5B9 178 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 OR6C68A6NDL8 312 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 BLOC1S5-TXNDC5H3BN57 136 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 SOCS6O14544 535 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 ARPC1BO15143 372 aaKnown RBP3.05□□□□□ -1.92
CHD9-213ENST00000564845 WISP2O76076 250 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 NDUFB2O95178 105 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 ALPLP05186 524 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 MTNR1AP48039 350 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 CLDN12P56749 244 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 CLRN1P58418 232 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 TAS2R45P59539 299 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 RPL23AP62750 156 aaKnown RBP3.05□□□□□ -1.92
CHD9-213ENST00000564845 AGAP7PQ5VUJ5 663 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 TDHQ8IZJ6 230 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 MUC15Q8N387 334 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 SLC38A9Q8NBW4 561 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 TFAP2CQ92754 450 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 FGF11Q92914 225 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 LINC00615Q96LM1 132 aaPredicted RBP3.05□□□□□ -1.92
CHD9-213ENST00000564845 THY1P04216 161 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 ACVR1BP36896 505 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 SLC1A3P43003 542 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 PRKXP51817 358 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 UCP3P55916 312 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 CBLN3Q6UW01 205 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 RIMKLAQ8IXN7 391 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 SDR9C7Q8NEX9 313 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 ARL11Q969Q4 196 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 ERGIC1Q969X5 290 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 JSRP1Q96MG2 331 aaPredicted RBP3.05□□□□□ -1.92
CHD9-213ENST00000564845 CNN2Q99439 309 aaKnown RBP3.05□□□□□ -1.92
CHD9-213ENST00000564845 CHMP1AQ9HD42 196 aaPredicted RBP3.05□□□□□ -1.92
CHD9-213ENST00000564845 DUSP22Q9NRW4 184 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 DCAF13Q9NV06 445 aaKnown RBP3.05□□□□□ -1.92
CHD9-213ENST00000564845 ETAA1Q9NY74 926 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 NDUFAF4Q9P032 175 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 DKKL1Q9UK85 242 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 HRH3Q9Y5N1 445 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 SERTM1A2A2V5 107 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 ARNTLO00327 626 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 CDC42EP2O14613 210 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 IGHG1P01857 330 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 BMP2P12643 396 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 EDN3P14138 238 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 GABRA1P14867 456 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 PCGF2P35227 344 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 APLNRP35414 380 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 ALDH3B2P48448 385 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 EMDP50402 254 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 RAB35Q15286 201 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 CRTC2Q53ET0 693 aaPredicted RBP3.05□□□□□ -1.92
CHD9-213ENST00000564845 SMUG1Q53HV7 270 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 DHRS13Q6UX07 377 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 PROKR2Q8NFJ6 384 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 GPR32P1Q8NGA4 272 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 OR10A5Q9H207 317 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 OR10A2Q9H208 303 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 WDR76Q9H967 626 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 UFSP2Q9NUQ7 469 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 FAM96BQ9Y3D0 163 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 PCDHGA6Q9Y5G7 932 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 TRBV5-4A0A0C4DH59 114 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 ZNF99A8MXY4 864 aaPredicted RBP3.05□□□□□ -1.92
CHD9-213ENST00000564845 RNASEK-C17orf49H0YIS7 233 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 GSTZ1O43708 216 aaPredicted RBP3.05□□□□□ -1.92
CHD9-213ENST00000564845 EIF4E2O60573 245 aaKnown RBP3.05□□□□□ -1.92
CHD9-213ENST00000564845 COX5BP10606 129 aa3.05□□□□□ -1.92
CHD9-213ENST00000564845 SLC2A2P11168 524 aaPredicted RBP3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms