RNA–Protein interactions for RNA: ENST00000564399.1

VPS4A-203, Transcript of vacuolar protein sorting 4 homolog A, humanhuman

TSL 5

Gene VPS4A, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4A-203ENST00000564399 GUCA1AP43080 201 aaPredicted RBP6.08□□□□□ -1.44
VPS4A-203ENST00000564399 SLC1A6P48664 564 aa6.08□□□□□ -1.44
VPS4A-203ENST00000564399 CD47Q08722 323 aa6.08□□□□□ -1.44
VPS4A-203ENST00000564399 FADDQ13158 208 aa6.08□□□□□ -1.44
VPS4A-203ENST00000564399 ZNF404Q494X3 552 aa6.08□□□□□ -1.44
VPS4A-203ENST00000564399 OXLD1Q5BKU9 147 aa6.08□□□□□ -1.44
VPS4A-203ENST00000564399 FAM201AQ5SY85 155 aa6.08□□□□□ -1.44
VPS4A-203ENST00000564399 C10orf128Q5T292 105 aa6.08□□□□□ -1.44
VPS4A-203ENST00000564399 METTL11BQ5VVY1 283 aa6.08□□□□□ -1.44
VPS4A-203ENST00000564399 REEP3Q6NUK4 255 aa6.08□□□□□ -1.44
VPS4A-203ENST00000564399 TTC33Q6PID6 262 aaPredicted RBP6.08□□□□□ -1.44
VPS4A-203ENST00000564399 LYPD2Q6UXB3 125 aa6.08□□□□□ -1.44
VPS4A-203ENST00000564399 HDDC2Q7Z4H3 204 aa6.08□□□□□ -1.44
VPS4A-203ENST00000564399 KIRREL3Q8IZU9 778 aa6.08□□□□□ -1.44
VPS4A-203ENST00000564399 C1orf87Q8N0U7 546 aa6.08□□□□□ -1.44
VPS4A-203ENST00000564399 OR5AS1Q8N127 324 aa6.08□□□□□ -1.44
VPS4A-203ENST00000564399 C11orf44Q8N8P7 122 aa6.08□□□□□ -1.44
VPS4A-203ENST00000564399 NPEPL1Q8NDH3 523 aa6.08□□□□□ -1.44
VPS4A-203ENST00000564399 LHX4Q969G2 390 aa6.08□□□□□ -1.44
VPS4A-203ENST00000564399 NABP1Q96AH0 204 aa6.08□□□□□ -1.44
VPS4A-203ENST00000564399 TECTBQ96PL2 329 aa6.08□□□□□ -1.44
VPS4A-203ENST00000564399 ZNF607Q96SK3 696 aa6.08□□□□□ -1.44
VPS4A-203ENST00000564399 MRPL13Q9BYD1 178 aaKnown RBP6.08□□□□□ -1.44
VPS4A-203ENST00000564399 C20orf27Q9GZN8 174 aa6.08□□□□□ -1.44
VPS4A-203ENST00000564399 C16orf95Q9H693 158 aa6.08□□□□□ -1.44
VPS4A-203ENST00000564399 SLCO1B3Q9NPD5 702 aa6.08□□□□□ -1.44
VPS4A-203ENST00000564399 NECAP2Q9NVZ3 263 aa6.08□□□□□ -1.44
VPS4A-203ENST00000564399 AURKAIP1Q9NWT8 199 aaPredicted RBP6.08□□□□□ -1.44
VPS4A-203ENST00000564399 ZNF229Q9UJW7 825 aa6.08□□□□□ -1.44
VPS4A-203ENST00000564399 FAM96BQ9Y3D0 163 aa6.08□□□□□ -1.44
VPS4A-203ENST00000564399 TIMM10BQ9Y5J6 103 aa6.08□□□□□ -1.44
VPS4A-203ENST00000564399 A0A0U1RQK1 487 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 ANKRD61A6NGH8 418 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 CPSF4LA6NMK7 179 aaKnown RBP6.07□□□□□ -1.44
VPS4A-203ENST00000564399 CENPBD1B2RD01 187 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 SDHDO14521 159 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 GPR37O15354 613 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 CHP2O43745 196 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 XPNPEP2O43895 674 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 ICMTO60725 284 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 SERPINB7O75635 380 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 TSPAN9O75954 239 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 LIPFP07098 398 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 BMP2P12643 396 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 IRF2P14316 349 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 TUBG1P23258 451 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 LAP3P28838 519 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 EPHA3P29320 983 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 AQP1P29972 269 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 TGFBR2P37173 567 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 ETV4P43268 484 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 SRP9P49458 86 aaKnown RBP6.07□□□□□ -1.44
VPS4A-203ENST00000564399 DAP3P51398 398 aaKnown RBP6.07□□□□□ -1.44
VPS4A-203ENST00000564399 PCBD1P61457 104 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 CDK6Q00534 326 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 GUCY1A3Q02108 690 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 FMODQ06828 376 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 RPL18Q07020 188 aaKnown RBP6.07□□□□□ -1.44
VPS4A-203ENST00000564399 DBPQ10586 325 aaPredicted RBP6.07□□□□□ -1.44
VPS4A-203ENST00000564399 HERPUD1Q15011 391 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 GCNT6Q5T4J0 391 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 FAM27BQ5VT28 67 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 CD276Q5ZPR3 534 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 NXNQ6DKJ4 435 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 C11orf87Q6NUJ2 197 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 C1orf94Q6P1W5 598 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 ZNF613Q6PF04 617 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 LINC00114Q6XXX2 140 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 DCDC5Q6ZRR9 648 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 MOGAT3Q86VF5 341 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 LDLRAD3Q86YD5 345 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 PDZD9Q8IXQ8 264 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 OR10AD1Q8NGE0 317 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 ASB10Q8WXI3 467 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 HAVCR1Q96D42 359 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 MEGF10Q96KG7 1140 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 WDFY2Q96P53 400 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 TBX15Q96SF7 602 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 SORT1Q99523 831 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 WFDC6Q9BQY6 131 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 MMADHCQ9H3L0 296 aaPredicted RBP6.07□□□□□ -1.44
VPS4A-203ENST00000564399 POFUT1Q9H488 388 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 WDR55Q9H6Y2 383 aaPredicted RBP6.07□□□□□ -1.44
VPS4A-203ENST00000564399 TUBG2Q9NRH3 451 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 INIPQ9NRY2 104 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 TBCCD1Q9NVR7 557 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 PNPOQ9NVS9 261 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 STX18Q9P2W9 335 aaKnown RBP6.07□□□□□ -1.44
VPS4A-203ENST00000564399 NDRG4Q9ULP0 352 aaKnown RBP6.07□□□□□ -1.44
VPS4A-203ENST00000564399 ANGPT4Q9Y264 503 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 STARD10Q9Y365 291 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 UGT2A1Q9Y4X1 527 aa6.07□□□□□ -1.44
VPS4A-203ENST00000564399 IGKV1D-43A0A0B4J1Z2 117 aa6.06□□□□□ -1.44
VPS4A-203ENST00000564399 A0A1W2PPL8 197 aa6.06□□□□□ -1.44
VPS4A-203ENST00000564399 GMNCA6NCL1 334 aa6.06□□□□□ -1.44
VPS4A-203ENST00000564399 M0R3H8 397 aa6.06□□□□□ -1.44
VPS4A-203ENST00000564399 MPIG6BO95866 241 aa6.06□□□□□ -1.44
VPS4A-203ENST00000564399 CST2P09228 141 aa6.06□□□□□ -1.44
VPS4A-203ENST00000564399 ASAH2BP0C7U1 165 aa6.06□□□□□ -1.44
VPS4A-203ENST00000564399 NR2C1P13056 603 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms