RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 CDH20Q9HBT6 801 aa14.45□□□□□ -0.1
RNF40-206ENST00000564260 EMC7Q9NPA0 242 aa14.45□□□□□ -0.1
RNF40-206ENST00000564260 PLEK2Q9NYT0 353 aa14.45□□□□□ -0.1
RNF40-206ENST00000564260 TVP23BQ9NYZ1 205 aa14.45□□□□□ -0.1
RNF40-206ENST00000564260 ATP23Q9Y6H3 246 aa14.45□□□□□ -0.1
RNF40-206ENST00000564260 OR6C6A6NF89 314 aa14.44□□□□□ -0.1
RNF40-206ENST00000564260 ERICH4A6NGS2 130 aa14.44□□□□□ -0.1
RNF40-206ENST00000564260 E7EQL1 145 aa14.44□□□□□ -0.1
RNF40-206ENST00000564260 DOK2O60496 412 aa14.44□□□□□ -0.1
RNF40-206ENST00000564260 MITFO75030 526 aaPredicted RBP14.44□□□□□ -0.1
RNF40-206ENST00000564260 SCG5P05408 212 aa14.44□□□□□ -0.1
RNF40-206ENST00000564260 PATE4P0C8F1 98 aa14.44□□□□□ -0.1
RNF40-206ENST00000564260 ANPEPP15144 967 aa14.44□□□□□ -0.1
RNF40-206ENST00000564260 CD53P19397 219 aa14.44□□□□□ -0.1
RNF40-206ENST00000564260 GGT2P36268 569 aa14.44□□□□□ -0.1
RNF40-206ENST00000564260 RGS6P49758 472 aa14.44□□□□□ -0.1
RNF40-206ENST00000564260 ENTPD1P49961 510 aa14.44□□□□□ -0.1
RNF40-206ENST00000564260 SPOCK1Q08629 439 aa14.44□□□□□ -0.1
RNF40-206ENST00000564260 TMED1Q13445 227 aa14.44□□□□□ -0.1
RNF40-206ENST00000564260 EFNB3Q15768 340 aa14.44□□□□□ -0.1
RNF40-206ENST00000564260 LINC01590Q5TEZ4 76 aa14.44□□□□□ -0.1
RNF40-206ENST00000564260 LCN1P1Q5VSP4 162 aa14.44□□□□□ -0.1
RNF40-206ENST00000564260 NXNL2Q5VZ03 156 aa14.44□□□□□ -0.1
RNF40-206ENST00000564260 SLC18B1Q6NT16 456 aa14.44□□□□□ -0.1
RNF40-206ENST00000564260 UGT2A3Q6UWM9 527 aa14.44□□□□□ -0.1
RNF40-206ENST00000564260 VASH1Q7L8A9 365 aaPredicted RBP14.44□□□□□ -0.1
RNF40-206ENST00000564260 CXXC5Q7LFL8 322 aaKnown RBP14.44□□□□□ -0.1
RNF40-206ENST00000564260 SHFQ7M4L6 423 aa14.44□□□□□ -0.1
RNF40-206ENST00000564260 MYPOPQ86VE0 399 aaPredicted RBP14.44□□□□□ -0.1
RNF40-206ENST00000564260 GID4Q8IVV7 300 aa14.44□□□□□ -0.1
RNF40-206ENST00000564260 MUC15Q8N387 334 aa14.44□□□□□ -0.1
RNF40-206ENST00000564260 CPEB3Q8NE35 698 aaKnown RBP14.44□□□□□ -0.1
RNF40-206ENST00000564260 TMEM163Q8TC26 289 aa14.44□□□□□ -0.1
RNF40-206ENST00000564260 MS4A3Q96HJ5 214 aa14.44□□□□□ -0.1
RNF40-206ENST00000564260 CCL19Q99731 98 aa14.44□□□□□ -0.1
RNF40-206ENST00000564260 ELOVL3Q9HB03 270 aa14.44□□□□□ -0.1
RNF40-206ENST00000564260 HINT3Q9NQE9 182 aaKnown RBP14.44□□□□□ -0.1
RNF40-206ENST00000564260 CBLN4Q9NTU7 201 aa14.44□□□□□ -0.1
RNF40-206ENST00000564260 MRPL22Q9NWU5 206 aaKnown RBP14.44□□□□□ -0.1
RNF40-206ENST00000564260 EIF3KQ9UBQ5 218 aaKnown RBP14.44□□□□□ -0.1
RNF40-206ENST00000564260 LHFPL6Q9Y693 200 aa14.44□□□□□ -0.1
RNF40-206ENST00000564260 COMMD3-BMI1R4GMX3 469 aa14.44□□□□□ -0.1
RNF40-206ENST00000564260 SLC22A31A6NKX4 558 aa14.43□□□□□ -0.1
RNF40-206ENST00000564260 B9A039 149 aa14.43□□□□□ -0.1
RNF40-206ENST00000564260 E9PQ18 207 aa14.43□□□□□ -0.1
RNF40-206ENST00000564260 CASQ2O14958 399 aaPredicted RBP14.43□□□□□ -0.1
RNF40-206ENST00000564260 SYNGR3O43761 229 aa14.43□□□□□ -0.1
RNF40-206ENST00000564260 GSTT1P30711 240 aa14.43□□□□□ -0.1
RNF40-206ENST00000564260 FABP6P51161 128 aa14.43□□□□□ -0.1
RNF40-206ENST00000564260 NUDT6P53370 316 aa14.43□□□□□ -0.1
RNF40-206ENST00000564260 ADAM8P78325 824 aa14.43□□□□□ -0.1
RNF40-206ENST00000564260 ELF3P78545 371 aaPredicted RBP14.43□□□□□ -0.1
RNF40-206ENST00000564260 HGFACQ04756 655 aa14.43□□□□□ -0.1
RNF40-206ENST00000564260 ELFN2Q5R3F8 820 aa14.43□□□□□ -0.1
RNF40-206ENST00000564260 SLC25A30Q5SVS4 291 aa14.43□□□□□ -0.1
RNF40-206ENST00000564260 TMEM236Q5W0B7 351 aa14.43□□□□□ -0.1
RNF40-206ENST00000564260 PLBD1Q6P4A8 553 aa14.43□□□□□ -0.1
RNF40-206ENST00000564260 CPOQ8IVL8 374 aa14.43□□□□□ -0.1
RNF40-206ENST00000564260 ZNF454Q8N9F8 522 aa14.43□□□□□ -0.1
RNF40-206ENST00000564260 OR9Q1Q8NGQ5 310 aa14.43□□□□□ -0.1
RNF40-206ENST00000564260 OR6K6Q8NGW6 343 aa14.43□□□□□ -0.1
RNF40-206ENST00000564260 FOXC2Q99958 501 aa14.43□□□□□ -0.1
RNF40-206ENST00000564260 VCXQ9H320 206 aa14.43□□□□□ -0.1
RNF40-206ENST00000564260 RIBC2Q9H4K1 309 aa14.43□□□□□ -0.1
RNF40-206ENST00000564260 TBCCD1Q9NVR7 557 aa14.43□□□□□ -0.1
RNF40-206ENST00000564260 LRBAP50851 2863 aa14.43□□□□□ -0.1
RNF40-206ENST00000564260 MPZL2O60487 215 aa14.42□□□□□ -0.1
RNF40-206ENST00000564260 MPZL1O95297 269 aa14.42□□□□□ -0.1
RNF40-206ENST00000564260 SLC2A5P22732 501 aa14.42□□□□□ -0.1
RNF40-206ENST00000564260 APEX1P27695 318 aaKnown RBP14.42□□□□□ -0.1
RNF40-206ENST00000564260 PYCR1P32322 319 aa14.42□□□□□ -0.1
RNF40-206ENST00000564260 SERPINF1P36955 418 aa14.42□□□□□ -0.1
RNF40-206ENST00000564260 UCP2P55851 309 aa14.42□□□□□ -0.1
RNF40-206ENST00000564260 SNTB2Q13425 540 aaKnown RBP14.42□□□□□ -0.1
RNF40-206ENST00000564260 GGTLC2Q14390 218 aa14.42□□□□□ -0.1
RNF40-206ENST00000564260 ZNF774Q6NX45 483 aa14.42□□□□□ -0.1
RNF40-206ENST00000564260 B3GLCTQ6Y288 498 aa14.42□□□□□ -0.1
RNF40-206ENST00000564260 OR1F12Q8NHA8 337 aa14.42□□□□□ -0.1
RNF40-206ENST00000564260 AKR7LQ8NHP1 331 aa14.42□□□□□ -0.1
RNF40-206ENST00000564260 HTRA1Q92743 480 aa14.42□□□□□ -0.1
RNF40-206ENST00000564260 RFKQ969G6 155 aa14.42□□□□□ -0.1
RNF40-206ENST00000564260 INTS14Q96SY0 518 aa14.42□□□□□ -0.1
RNF40-206ENST00000564260 MNTQ99583 582 aa14.42□□□□□ -0.1
RNF40-206ENST00000564260 PITX2Q99697 317 aa14.42□□□□□ -0.1
RNF40-206ENST00000564260 TRAF4Q9BUZ4 470 aaPredicted RBP14.42□□□□□ -0.1
RNF40-206ENST00000564260 DDX28Q9NUL7 540 aaKnown RBP14.42□□□□□ -0.1
RNF40-206ENST00000564260 ZNF701Q9NV72 531 aaPredicted RBP14.42□□□□□ -0.1
RNF40-206ENST00000564260 HAO2Q9NYQ3 351 aa14.42□□□□□ -0.1
RNF40-206ENST00000564260 H2AFY2Q9P0M6 372 aaPredicted RBP14.42□□□□□ -0.1
RNF40-206ENST00000564260 GDF2Q9UK05 429 aaPredicted RBP14.42□□□□□ -0.1
RNF40-206ENST00000564260 CMAHPQ9Y471 501 aa14.42□□□□□ -0.1
RNF40-206ENST00000564260 RAI1Q7Z5J4 1906 aaPredicted RBP14.42□□□□□ -0.1
RNF40-206ENST00000564260 ANKRD17O75179 2603 aaKnown RBP14.41□□□□□ -0.1
RNF40-206ENST00000564260 C5orf49A4QMS7 147 aa14.41□□□□□ -0.1
RNF40-206ENST00000564260 FAM183AA6NL82 134 aa14.41□□□□□ -0.1
RNF40-206ENST00000564260 SNTNA6NMZ2 147 aa14.41□□□□□ -0.1
RNF40-206ENST00000564260 ANKRD65E5RJM6 399 aa14.41□□□□□ -0.1
RNF40-206ENST00000564260 OVOL3O00110 214 aa14.41□□□□□ -0.1
RNF40-206ENST00000564260 TLX2O43763 284 aaPredicted RBP14.41□□□□□ -0.1
RNF40-206ENST00000564260 PRKYO43930 277 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms