RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 TREML1Q86YW5 311 aa14.6□□□□□ -0.07
VPS9D1-203ENST00000563798 NPEPL1Q8NDH3 523 aa14.6□□□□□ -0.07
VPS9D1-203ENST00000563798 SEMA6DQ8NFY4 1073 aa14.6□□□□□ -0.07
VPS9D1-203ENST00000563798 Q96M85 177 aa14.6□□□□□ -0.07
VPS9D1-203ENST00000563798 NDEL1Q9GZM8 345 aa14.6□□□□□ -0.07
VPS9D1-203ENST00000563798 NRIP3Q9NQ35 241 aa14.6□□□□□ -0.07
VPS9D1-203ENST00000563798 SIGLEC7Q9Y286 467 aa14.6□□□□□ -0.07
VPS9D1-203ENST00000563798 ADAM18Q9Y3Q7 739 aa14.6□□□□□ -0.07
VPS9D1-203ENST00000563798 TEX13CA0A0J9YWL9 993 aa14.59□□□□□ -0.07
VPS9D1-203ENST00000563798 H7C1C5 153 aa14.59□□□□□ -0.07
VPS9D1-203ENST00000563798 XKRYO14609 159 aa14.59□□□□□ -0.07
VPS9D1-203ENST00000563798 SPRY3O43610 288 aa14.59□□□□□ -0.07
VPS9D1-203ENST00000563798 MPZL1O95297 269 aa14.59□□□□□ -0.07
VPS9D1-203ENST00000563798 RPL4P36578 427 aaKnown RBP14.59□□□□□ -0.07
VPS9D1-203ENST00000563798 LCN6P62502 163 aa14.59□□□□□ -0.07
VPS9D1-203ENST00000563798 PSG7Q13046 419 aa14.59□□□□□ -0.07
VPS9D1-203ENST00000563798 CDK5R2Q13319 367 aa14.59□□□□□ -0.07
VPS9D1-203ENST00000563798 MTX3Q5HYI7 312 aa14.59□□□□□ -0.07
VPS9D1-203ENST00000563798 GPR139Q6DWJ6 353 aa14.59□□□□□ -0.07
VPS9D1-203ENST00000563798 FAHD2BQ6P2I3 314 aaPredicted RBP14.59□□□□□ -0.07
VPS9D1-203ENST00000563798 USP43Q70EL4 1123 aa14.59□□□□□ -0.07
VPS9D1-203ENST00000563798 RRM2BQ7LG56 351 aa14.59□□□□□ -0.07
VPS9D1-203ENST00000563798 FAHD2AQ96GK7 314 aa14.59□□□□□ -0.07
VPS9D1-203ENST00000563798 MED4Q9NPJ6 270 aa14.59□□□□□ -0.07
VPS9D1-203ENST00000563798 NDUFAF4Q9P032 175 aa14.59□□□□□ -0.07
VPS9D1-203ENST00000563798 RPS6KA6Q9UK32 745 aa14.59□□□□□ -0.07
VPS9D1-203ENST00000563798 A0A0G2JMP0 313 aa14.58□□□□□ -0.08
VPS9D1-203ENST00000563798 A0A0X1KG70 313 aa14.58□□□□□ -0.08
VPS9D1-203ENST00000563798 J3QW42 95 aa14.58□□□□□ -0.08
VPS9D1-203ENST00000563798 NDUFB2O95178 105 aa14.58□□□□□ -0.08
VPS9D1-203ENST00000563798 VENTXO95231 258 aa14.58□□□□□ -0.08
VPS9D1-203ENST00000563798 AVPP01185 164 aa14.58□□□□□ -0.08
VPS9D1-203ENST00000563798 H1F0P07305 194 aaKnown RBP14.58□□□□□ -0.08
VPS9D1-203ENST00000563798 CTLA4P16410 223 aa14.58□□□□□ -0.08
VPS9D1-203ENST00000563798 RHCEP18577 417 aa14.58□□□□□ -0.08
VPS9D1-203ENST00000563798 KITLGP21583 273 aa14.58□□□□□ -0.08
VPS9D1-203ENST00000563798 GATA3P23771 443 aa14.58□□□□□ -0.08
VPS9D1-203ENST00000563798 SDHAP31040 664 aa14.58□□□□□ -0.08
VPS9D1-203ENST00000563798 LSM6P62312 80 aaKnown RBP14.58□□□□□ -0.08
VPS9D1-203ENST00000563798 HSP90B2PQ58FF3 399 aa14.58□□□□□ -0.08
VPS9D1-203ENST00000563798 SHQ1Q6PI26 577 aaKnown RBP14.58□□□□□ -0.08
VPS9D1-203ENST00000563798 VASH1Q7L8A9 365 aaPredicted RBP14.58□□□□□ -0.08
VPS9D1-203ENST00000563798 OR4M2Q8NGB6 313 aa14.58□□□□□ -0.08
VPS9D1-203ENST00000563798 CCL17Q92583 94 aa14.58□□□□□ -0.08
VPS9D1-203ENST00000563798 FAM162AQ96A26 154 aa14.58□□□□□ -0.08
VPS9D1-203ENST00000563798 C7orf34Q96L11 122 aa14.58□□□□□ -0.08
VPS9D1-203ENST00000563798 DHRS1Q96LJ7 313 aa14.58□□□□□ -0.08
VPS9D1-203ENST00000563798 ZNF570Q96NI8 536 aa14.58□□□□□ -0.08
VPS9D1-203ENST00000563798 KCTD14Q9BQ13 255 aaPredicted RBP14.58□□□□□ -0.08
VPS9D1-203ENST00000563798 TMPRSS13Q9BYE2 586 aa14.58□□□□□ -0.08
VPS9D1-203ENST00000563798 MYLK2Q9H1R3 596 aa14.58□□□□□ -0.08
VPS9D1-203ENST00000563798 OCEL1Q9H607 264 aa14.58□□□□□ -0.08
VPS9D1-203ENST00000563798 EMC7Q9NPA0 242 aa14.58□□□□□ -0.08
VPS9D1-203ENST00000563798 VSX1Q9NZR4 365 aaPredicted RBP14.58□□□□□ -0.08
VPS9D1-203ENST00000563798 ATPIF1Q9UII2 106 aa14.58□□□□□ -0.08
VPS9D1-203ENST00000563798 PPIAL4EA0A075B759 164 aa14.57□□□□□ -0.08
VPS9D1-203ENST00000563798 PPIAL4CA0A0B4J2A2 164 aa14.57□□□□□ -0.08
VPS9D1-203ENST00000563798 PPIAL4DF5H284 164 aa14.57□□□□□ -0.08
VPS9D1-203ENST00000563798 SGCEO43556 437 aa14.57□□□□□ -0.08
VPS9D1-203ENST00000563798 ABHD16AO95870 558 aa14.57□□□□□ -0.08
VPS9D1-203ENST00000563798 TXNDC12O95881 172 aa14.57□□□□□ -0.08
VPS9D1-203ENST00000563798 PPIAL4FP0DN26 164 aa14.57□□□□□ -0.08
VPS9D1-203ENST00000563798 GSTM3P21266 225 aa14.57□□□□□ -0.08
VPS9D1-203ENST00000563798 OMPP47874 163 aa14.57□□□□□ -0.08
VPS9D1-203ENST00000563798 NUDT2P50583 147 aa14.57□□□□□ -0.08
VPS9D1-203ENST00000563798 AQP6Q13520 282 aa14.57□□□□□ -0.08
VPS9D1-203ENST00000563798 KRR1Q13601 381 aaKnown RBP14.57□□□□□ -0.08
VPS9D1-203ENST00000563798 KCNMB1Q16558 191 aa14.57□□□□□ -0.08
VPS9D1-203ENST00000563798 C1QL2Q7Z5L3 287 aa14.57□□□□□ -0.08
VPS9D1-203ENST00000563798 ADCK1Q86TW2 530 aa14.57□□□□□ -0.08
VPS9D1-203ENST00000563798 ZNF418Q8TF45 676 aaPredicted RBP14.57□□□□□ -0.08
VPS9D1-203ENST00000563798 HAVCR1Q96D42 359 aa14.57□□□□□ -0.08
VPS9D1-203ENST00000563798 CMTM5Q96DZ9 223 aa14.57□□□□□ -0.08
VPS9D1-203ENST00000563798 FAM46AQ96IP4 442 aaKnown RBP14.57□□□□□ -0.08
VPS9D1-203ENST00000563798 COG8Q96MW5 612 aa14.57□□□□□ -0.08
VPS9D1-203ENST00000563798 FUZQ9BT04 418 aa14.57□□□□□ -0.08
VPS9D1-203ENST00000563798 DCAF13Q9NV06 445 aaKnown RBP14.57□□□□□ -0.08
VPS9D1-203ENST00000563798 PURGQ9UJV8 347 aaKnown RBP14.57□□□□□ -0.08
VPS9D1-203ENST00000563798 TANC2Q9HCD6 1990 aa14.56□□□□□ -0.08
VPS9D1-203ENST00000563798 OR6C6A6NF89 314 aa14.56□□□□□ -0.08
VPS9D1-203ENST00000563798 DOK2O60496 412 aa14.56□□□□□ -0.08
VPS9D1-203ENST00000563798 KHDRBS3O75525 346 aaKnown RBP14.56□□□□□ -0.08
VPS9D1-203ENST00000563798 NCK1P16333 377 aa14.56□□□□□ -0.08
VPS9D1-203ENST00000563798 PRDX6P30041 224 aa14.56□□□□□ -0.08
VPS9D1-203ENST00000563798 HTR5AP47898 357 aa14.56□□□□□ -0.08
VPS9D1-203ENST00000563798 FXYD6P3P58550 94 aa14.56□□□□□ -0.08
VPS9D1-203ENST00000563798 PSME3P61289 254 aa14.56□□□□□ -0.08
VPS9D1-203ENST00000563798 SPRNQ5BIV9 151 aa14.56□□□□□ -0.08
VPS9D1-203ENST00000563798 DPY19L2P2Q6ZN68 376 aa14.56□□□□□ -0.08
VPS9D1-203ENST00000563798 GLB1L2Q8IW92 636 aa14.56□□□□□ -0.08
VPS9D1-203ENST00000563798 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.56□□□□□ -0.08
VPS9D1-203ENST00000563798 SAMD8Q96LT4 415 aa14.56□□□□□ -0.08
VPS9D1-203ENST00000563798 SYT4Q9H2B2 425 aa14.56□□□□□ -0.08
VPS9D1-203ENST00000563798 MSL2Q9HCI7 577 aa14.56□□□□□ -0.08
VPS9D1-203ENST00000563798 FAM32AQ9Y421 112 aaKnown RBP14.56□□□□□ -0.08
VPS9D1-203ENST00000563798 TIMM8AO60220 97 aaPredicted RBP14.55□□□□□ -0.08
VPS9D1-203ENST00000563798 SLC16A7O60669 478 aa14.55□□□□□ -0.08
VPS9D1-203ENST00000563798 FSHBP01225 129 aa14.55□□□□□ -0.08
VPS9D1-203ENST00000563798 EPHA1P21709 976 aa14.55□□□□□ -0.08
VPS9D1-203ENST00000563798 HILS1P60008 231 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms