RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 WDR1O75083 606 aa19.33■□□□□ 0.69
LINC01960-201ENST00000563759 TDGF1P3P51864 188 aa19.33■□□□□ 0.69
LINC01960-201ENST00000563759 RIDAP52758 137 aaKnown RBP19.33■□□□□ 0.69
LINC01960-201ENST00000563759 SOWAHCQ53LP3 525 aaPredicted RBP19.33■□□□□ 0.69
LINC01960-201ENST00000563759 NSUN5P2Q63ZY6 315 aa19.33■□□□□ 0.69
LINC01960-201ENST00000563759 DMKNQ6E0U4 476 aaPredicted RBP19.33■□□□□ 0.69
LINC01960-201ENST00000563759 OR2A2Q6IF42 318 aa19.33■□□□□ 0.69
LINC01960-201ENST00000563759 CFAP77Q6ZQR2 320 aa19.33■□□□□ 0.69
LINC01960-201ENST00000563759 C9orf106Q8NAJ2 232 aa19.33■□□□□ 0.69
LINC01960-201ENST00000563759 SNRNP40Q96DI7 357 aaKnown RBP19.33■□□□□ 0.69
LINC01960-201ENST00000563759 MAP6Q96JE9 813 aa19.33■□□□□ 0.69
LINC01960-201ENST00000563759 CENPOQ9BU64 300 aa19.33■□□□□ 0.69
LINC01960-201ENST00000563759 SLC25A18Q9H1K4 315 aa19.33■□□□□ 0.69
LINC01960-201ENST00000563759 CENPMQ9NSP4 180 aa19.33■□□□□ 0.69
LINC01960-201ENST00000563759 PTTG2Q9NZH5 202 aa19.33■□□□□ 0.69
LINC01960-201ENST00000563759 SF3B6Q9Y3B4 125 aaKnown RBP19.33■□□□□ 0.69
LINC01960-201ENST00000563759 TPRP12270 2363 aaKnown RBP19.33■□□□□ 0.68
LINC01960-201ENST00000563759 GPX5O75715 221 aa19.33■□□□□ 0.68
LINC01960-201ENST00000563759 CRYBB2P43320 205 aa19.33■□□□□ 0.68
LINC01960-201ENST00000563759 TGM4P49221 684 aa19.33■□□□□ 0.68
LINC01960-201ENST00000563759 GDI2P50395 445 aaKnown RBP19.33■□□□□ 0.68
LINC01960-201ENST00000563759 SPCS2Q15005 226 aa19.33■□□□□ 0.68
LINC01960-201ENST00000563759 RNF133Q8WVZ7 376 aa19.33■□□□□ 0.68
LINC01960-201ENST00000563759 HSD17B8Q92506 261 aa19.33■□□□□ 0.68
LINC01960-201ENST00000563759 SLX1AQ9BQ83 275 aa19.33■□□□□ 0.68
LINC01960-201ENST00000563759 SIAEQ9HAT2 523 aa19.33■□□□□ 0.68
LINC01960-201ENST00000563759 PKD1L2Q7Z442 2459 aa19.32■□□□□ 0.68
LINC01960-201ENST00000563759 CD8B2A6NJW9 211 aa19.32■□□□□ 0.68
LINC01960-201ENST00000563759 H2BFMP0C1H6 154 aa19.32■□□□□ 0.68
LINC01960-201ENST00000563759 TGFBR1P36897 503 aa19.32■□□□□ 0.68
LINC01960-201ENST00000563759 ENDOGQ14249 297 aaKnown RBP19.32■□□□□ 0.68
LINC01960-201ENST00000563759 PRR30Q53SZ7 412 aaPredicted RBP19.32■□□□□ 0.68
LINC01960-201ENST00000563759 GDPGP1Q6ZNW5 385 aa19.32■□□□□ 0.68
LINC01960-201ENST00000563759 FAM214BQ7L5A3 538 aa19.32■□□□□ 0.68
LINC01960-201ENST00000563759 HIST2H2ABQ8IUE6 130 aaPredicted RBP19.32■□□□□ 0.68
LINC01960-201ENST00000563759 NDNFQ8TB73 568 aa19.32■□□□□ 0.68
LINC01960-201ENST00000563759 ACACBO00763 2458 aa19.32■□□□□ 0.68
LINC01960-201ENST00000563759 RER1O15258 196 aa19.31■□□□□ 0.68
LINC01960-201ENST00000563759 OGG1O15527 345 aa19.31■□□□□ 0.68
LINC01960-201ENST00000563759 HLA-DPB1P04440 258 aa19.31■□□□□ 0.68
LINC01960-201ENST00000563759 CD53P19397 219 aa19.31■□□□□ 0.68
LINC01960-201ENST00000563759 PCSK6P29122 969 aa19.31■□□□□ 0.68
LINC01960-201ENST00000563759 PTGER4P35408 488 aa19.31■□□□□ 0.68
LINC01960-201ENST00000563759 PER3P56645 1201 aa19.31■□□□□ 0.68
LINC01960-201ENST00000563759 FAPQ12884 760 aa19.31■□□□□ 0.68
LINC01960-201ENST00000563759 KLRB1Q12918 225 aa19.31■□□□□ 0.68
LINC01960-201ENST00000563759 NFATC3Q12968 1075 aa19.31■□□□□ 0.68
LINC01960-201ENST00000563759 FAM27BQ5VT28 67 aa19.31■□□□□ 0.68
LINC01960-201ENST00000563759 ABHD12BQ7Z5M8 362 aaPredicted RBP19.31■□□□□ 0.68
LINC01960-201ENST00000563759 CNEP1R1Q8N9A8 125 aa19.31■□□□□ 0.68
LINC01960-201ENST00000563759 FAM57AQ8TBR7 257 aa19.31■□□□□ 0.68
LINC01960-201ENST00000563759 PGLYRP3Q96LB9 341 aa19.31■□□□□ 0.68
LINC01960-201ENST00000563759 ATRXP46100 2492 aa19.31■□□□□ 0.68
LINC01960-201ENST00000563759 ZNF878C9JN71 531 aa19.31■□□□□ 0.68
LINC01960-201ENST00000563759 RPL36A-HNRNPH2H7BZ11 118 aa19.31■□□□□ 0.68
LINC01960-201ENST00000563759 ZNF254O75437 659 aa19.31■□□□□ 0.68
LINC01960-201ENST00000563759 NANOS3P60323 173 aaKnown RBP19.31■□□□□ 0.68
LINC01960-201ENST00000563759 FABP5Q01469 135 aa19.31■□□□□ 0.68
LINC01960-201ENST00000563759 TRAM1Q15629 374 aa19.31■□□□□ 0.68
LINC01960-201ENST00000563759 C9orf135Q5VTT2 229 aa19.31■□□□□ 0.68
LINC01960-201ENST00000563759 DEGS2Q6QHC5 323 aa19.31■□□□□ 0.68
LINC01960-201ENST00000563759 ZNF813Q6ZN06 617 aa19.31■□□□□ 0.68
LINC01960-201ENST00000563759 GHSRQ92847 366 aa19.31■□□□□ 0.68
LINC01960-201ENST00000563759 TRMT61AQ96FX7 289 aaKnown RBP19.31■□□□□ 0.68
LINC01960-201ENST00000563759 SH3GL3Q99963 347 aa19.31■□□□□ 0.68
LINC01960-201ENST00000563759 RNF167Q9H6Y7 350 aa19.31■□□□□ 0.68
LINC01960-201ENST00000563759 ASF1BQ9NVP2 202 aa19.31■□□□□ 0.68
LINC01960-201ENST00000563759 PRSS50Q9UI38 385 aa19.31■□□□□ 0.68
LINC01960-201ENST00000563759 GTF2A1LQ9UNN4 478 aa19.31■□□□□ 0.68
LINC01960-201ENST00000563759 ITPR1Q14643 2758 aa19.3■□□□□ 0.68
LINC01960-201ENST00000563759 TRIM64BA6NI03 449 aa19.3■□□□□ 0.68
LINC01960-201ENST00000563759 FARS2O95363 451 aaKnown RBP19.3■□□□□ 0.68
LINC01960-201ENST00000563759 OPRL1P41146 370 aa19.3■□□□□ 0.68
LINC01960-201ENST00000563759 OR3A2P47893 321 aa19.3■□□□□ 0.68
LINC01960-201ENST00000563759 STK11Q15831 433 aa19.3■□□□□ 0.68
LINC01960-201ENST00000563759 C1orf185Q5T7R7 199 aa19.3■□□□□ 0.68
LINC01960-201ENST00000563759 GFRALQ6UXV0 394 aa19.3■□□□□ 0.68
LINC01960-201ENST00000563759 SLC22A24Q8N4F4 322 aa19.3■□□□□ 0.68
LINC01960-201ENST00000563759 GJC3Q8NFK1 279 aa19.3■□□□□ 0.68
LINC01960-201ENST00000563759 KBTBD8Q8NFY9 601 aa19.3■□□□□ 0.68
LINC01960-201ENST00000563759 OR10S1Q8NGN2 331 aa19.3■□□□□ 0.68
LINC01960-201ENST00000563759 HDHD5Q9BXW7 423 aa19.3■□□□□ 0.68
LINC01960-201ENST00000563759 TXNL4BQ9NX01 149 aaKnown RBP19.3■□□□□ 0.68
LINC01960-201ENST00000563759 MALT1Q9UDY8 824 aa19.3■□□□□ 0.68
LINC01960-201ENST00000563759 RGS9O75916 674 aaPredicted RBP19.29■□□□□ 0.68
LINC01960-201ENST00000563759 ALKBH1Q13686 389 aaKnown RBP19.29■□□□□ 0.68
LINC01960-201ENST00000563759 TAF13Q15543 124 aa19.29■□□□□ 0.68
LINC01960-201ENST00000563759 C22orf42Q6IC83 251 aa19.29■□□□□ 0.68
LINC01960-201ENST00000563759 CD200R1LQ6Q8B3 271 aa19.29■□□□□ 0.68
LINC01960-201ENST00000563759 KLHL24Q6TFL4 600 aa19.29■□□□□ 0.68
LINC01960-201ENST00000563759 RNF166Q96A37 237 aaPredicted RBP19.29■□□□□ 0.68
LINC01960-201ENST00000563759 PDCD1LG2Q9BQ51 273 aa19.29■□□□□ 0.68
LINC01960-201ENST00000563759 FBXL3Q9UKT7 428 aa19.29■□□□□ 0.68
LINC01960-201ENST00000563759 MBD3L4A6NDZ8 208 aaPredicted RBP19.28■□□□□ 0.68
LINC01960-201ENST00000563759 MBD3L3A6NE82 208 aaPredicted RBP19.28■□□□□ 0.68
LINC01960-201ENST00000563759 MBD3L5A6NJ08 208 aaPredicted RBP19.28■□□□□ 0.68
LINC01960-201ENST00000563759 CST2P09228 141 aa19.28■□□□□ 0.68
LINC01960-201ENST00000563759 CD8BP10966 210 aa19.28■□□□□ 0.68
LINC01960-201ENST00000563759 ZNF182P17025 639 aaPredicted RBP19.28■□□□□ 0.68
LINC01960-201ENST00000563759 HSD11B1P28845 292 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms