RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 FLVCR1Q9Y5Y0 555 aa8.6□□□□□ -1.03
UBFD1-202ENST00000563366 FREM2Q5SZK8 3169 aa8.6□□□□□ -1.03
UBFD1-202ENST00000563366 TNRC6AQ8NDV7 1962 aaKnown RBP8.59□□□□□ -1.03
UBFD1-202ENST00000563366 IGHV3-15A0A0B4J1V0 119 aa8.59□□□□□ -1.03
UBFD1-202ENST00000563366 RGS13O14921 159 aa8.59□□□□□ -1.03
UBFD1-202ENST00000563366 RAMP1O60894 148 aa8.59□□□□□ -1.03
UBFD1-202ENST00000563366 TMEM127O75204 238 aa8.59□□□□□ -1.03
UBFD1-202ENST00000563366 ABHD16AO95870 558 aa8.59□□□□□ -1.03
UBFD1-202ENST00000563366 IGHG3P01860 377 aa8.59□□□□□ -1.03
UBFD1-202ENST00000563366 QDPRP09417 244 aa8.59□□□□□ -1.03
UBFD1-202ENST00000563366 OR8G3PP0DMU2 310 aa8.59□□□□□ -1.03
UBFD1-202ENST00000563366 NPR2P20594 1047 aa8.59□□□□□ -1.03
UBFD1-202ENST00000563366 MYL9P24844 172 aa8.59□□□□□ -1.03
UBFD1-202ENST00000563366 DCTDP32321 178 aa8.59□□□□□ -1.03
UBFD1-202ENST00000563366 MTNR1BP49286 362 aa8.59□□□□□ -1.03
UBFD1-202ENST00000563366 STARP49675 285 aa8.59□□□□□ -1.03
UBFD1-202ENST00000563366 CCR9P51686 369 aa8.59□□□□□ -1.03
UBFD1-202ENST00000563366 HCCSP53701 268 aa8.59□□□□□ -1.03
UBFD1-202ENST00000563366 FABP5Q01469 135 aa8.59□□□□□ -1.03
UBFD1-202ENST00000563366 SLC3A1Q07837 685 aa8.59□□□□□ -1.03
UBFD1-202ENST00000563366 DOC2BQ14184 412 aa8.59□□□□□ -1.03
UBFD1-202ENST00000563366 ZNF169Q14929 603 aaPredicted RBP8.59□□□□□ -1.03
UBFD1-202ENST00000563366 SF3B4Q15427 424 aaKnown RBP eCLIP8.59□□□□□ -1.032e-8■■■□□ 17.4
UBFD1-202ENST00000563366 ZNF829Q3KNS6 432 aaPredicted RBP8.59□□□□□ -1.03
UBFD1-202ENST00000563366 LIPNQ5VXI9 398 aa8.59□□□□□ -1.03
UBFD1-202ENST00000563366 CARD17Q5XLA6 110 aa8.59□□□□□ -1.03
UBFD1-202ENST00000563366 C22orf42Q6IC83 251 aa8.59□□□□□ -1.03
UBFD1-202ENST00000563366 BEND4Q6ZU67 534 aa8.59□□□□□ -1.03
UBFD1-202ENST00000563366 AAED1Q7RTV5 226 aa8.59□□□□□ -1.03
UBFD1-202ENST00000563366 TPRA1Q86W33 373 aa8.59□□□□□ -1.03
UBFD1-202ENST00000563366 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.59□□□□□ -1.03
UBFD1-202ENST00000563366 MCEMP1Q8IX19 187 aa8.59□□□□□ -1.03
UBFD1-202ENST00000563366 GPR137CQ8N3F9 429 aa8.59□□□□□ -1.03
UBFD1-202ENST00000563366 TEX19Q8NA77 164 aa8.59□□□□□ -1.03
UBFD1-202ENST00000563366 TBC1D15Q8TC07 691 aa8.59□□□□□ -1.03
UBFD1-202ENST00000563366 SMAP2Q8WU79 429 aaPredicted RBP8.59□□□□□ -1.03
UBFD1-202ENST00000563366 NSMAFQ92636 917 aa8.59□□□□□ -1.03
UBFD1-202ENST00000563366 GHSRQ92847 366 aa8.59□□□□□ -1.03
UBFD1-202ENST00000563366 SLC25A46Q96AG3 418 aa8.59□□□□□ -1.03
UBFD1-202ENST00000563366 PGLYRP3Q96LB9 341 aa8.59□□□□□ -1.03
UBFD1-202ENST00000563366 WACQ9BTA9 647 aa8.59□□□□□ -1.03
UBFD1-202ENST00000563366 ABHD6Q9BV23 337 aa8.59□□□□□ -1.03
UBFD1-202ENST00000563366 SSBP4Q9BWG4 385 aaPredicted RBP8.59□□□□□ -1.03
UBFD1-202ENST00000563366 TTTY10Q9BZA0 68 aa8.59□□□□□ -1.03
UBFD1-202ENST00000563366 ULBP2Q9BZM5 246 aa8.59□□□□□ -1.03
UBFD1-202ENST00000563366 WDR12Q9GZL7 423 aaKnown RBP8.59□□□□□ -1.03
UBFD1-202ENST00000563366 NELFAQ9H3P2 528 aa8.59□□□□□ -1.03
UBFD1-202ENST00000563366 C1orf198Q9H425 327 aa8.59□□□□□ -1.03
UBFD1-202ENST00000563366 MOB1AQ9H8S9 216 aa8.59□□□□□ -1.03
UBFD1-202ENST00000563366 SEC61A2Q9H9S3 476 aa8.59□□□□□ -1.03
UBFD1-202ENST00000563366 MRM2Q9UI43 246 aaKnown RBP8.59□□□□□ -1.03
UBFD1-202ENST00000563366 WASF3Q9UPY6 502 aa8.59□□□□□ -1.03
UBFD1-202ENST00000563366 ZNF281Q9Y2X9 895 aa8.59□□□□□ -1.03
UBFD1-202ENST00000563366 ZNF175Q9Y473 711 aa8.59□□□□□ -1.03
UBFD1-202ENST00000563366 PEX16Q9Y5Y5 336 aa8.59□□□□□ -1.03
UBFD1-202ENST00000563366 CNTRLQ7Z7A1 2325 aa8.58□□□□□ -1.04
UBFD1-202ENST00000563366 A0A075B6Q4 140 aa8.58□□□□□ -1.04
UBFD1-202ENST00000563366 IQCMA0A1B0GVH7 501 aa8.58□□□□□ -1.04
UBFD1-202ENST00000563366 ZNF724A8MTY0 619 aa8.58□□□□□ -1.04
UBFD1-202ENST00000563366 ZNF878C9JN71 531 aa8.58□□□□□ -1.04
UBFD1-202ENST00000563366 E9PI62 339 aa8.58□□□□□ -1.04
UBFD1-202ENST00000563366 H0YC42 278 aa8.58□□□□□ -1.04
UBFD1-202ENST00000563366 CASKO14936 926 aa8.58□□□□□ -1.04
UBFD1-202ENST00000563366 DHHO43323 396 aa8.58□□□□□ -1.04
UBFD1-202ENST00000563366 UPK3AO75631 287 aa8.58□□□□□ -1.04
UBFD1-202ENST00000563366 SC5DO75845 299 aa8.58□□□□□ -1.04
UBFD1-202ENST00000563366 H2BFMP0C1H6 154 aa8.58□□□□□ -1.04
UBFD1-202ENST00000563366 MSR1P21757 451 aa8.58□□□□□ -1.04
UBFD1-202ENST00000563366 MRPS34P82930 218 aaKnown RBP8.58□□□□□ -1.04
UBFD1-202ENST00000563366 DBPQ10586 325 aaPredicted RBP8.58□□□□□ -1.04
UBFD1-202ENST00000563366 ALKBH1Q13686 389 aaKnown RBP8.58□□□□□ -1.04
UBFD1-202ENST00000563366 ETFDHQ16134 617 aa8.58□□□□□ -1.04
UBFD1-202ENST00000563366 MEP1BQ16820 701 aa8.58□□□□□ -1.04
UBFD1-202ENST00000563366 NRN1LQ496H8 165 aa8.58□□□□□ -1.04
UBFD1-202ENST00000563366 RPUSD3Q6P087 351 aaKnown RBP8.58□□□□□ -1.04
UBFD1-202ENST00000563366 KLHL24Q6TFL4 600 aa8.58□□□□□ -1.04
UBFD1-202ENST00000563366 FOXL2NBQ6ZUU3 175 aa8.58□□□□□ -1.04
UBFD1-202ENST00000563366 DCXRQ7Z4W1 244 aa8.58□□□□□ -1.04
UBFD1-202ENST00000563366 C20orf196Q8IYI0 205 aa8.58□□□□□ -1.04
UBFD1-202ENST00000563366 CELF2-AS1Q8N7Q2 184 aa8.58□□□□□ -1.04
UBFD1-202ENST00000563366 OR5AK2Q8NH90 309 aa8.58□□□□□ -1.04
UBFD1-202ENST00000563366 ABHD4Q8TB40 342 aa8.58□□□□□ -1.04
UBFD1-202ENST00000563366 CPT1CQ8TCG5 803 aa8.58□□□□□ -1.04
UBFD1-202ENST00000563366 C11orf40Q8WZ69 217 aa8.58□□□□□ -1.04
UBFD1-202ENST00000563366 SARAFQ96BY9 339 aa8.58□□□□□ -1.04
UBFD1-202ENST00000563366 ZNF385AQ96PM9 386 aaKnown RBP8.58□□□□□ -1.04
UBFD1-202ENST00000563366 HDHD5Q9BXW7 423 aa8.58□□□□□ -1.04
UBFD1-202ENST00000563366 LINC00470Q9BZP3 86 aa8.58□□□□□ -1.04
UBFD1-202ENST00000563366 NXF2Q9GZY0 626 aaKnown RBP8.58□□□□□ -1.04
UBFD1-202ENST00000563366 BCO1Q9HAY6 547 aa8.58□□□□□ -1.04
UBFD1-202ENST00000563366 GLRX2Q9NS18 164 aa8.58□□□□□ -1.04
UBFD1-202ENST00000563366 CYB5R1Q9UHQ9 305 aa8.58□□□□□ -1.04
UBFD1-202ENST00000563366 KLHDC2Q9Y2U9 406 aa8.58□□□□□ -1.04
UBFD1-202ENST00000563366 PTPRZ1P23471 2315 aaPredicted RBP8.57□□□□□ -1.04
UBFD1-202ENST00000563366 A0A1B0GVC2 190 aa8.57□□□□□ -1.04
UBFD1-202ENST00000563366 CD8B2A6NJW9 211 aa8.57□□□□□ -1.04
UBFD1-202ENST00000563366 CLDN25C9JDP6 229 aa8.57□□□□□ -1.04
UBFD1-202ENST00000563366 AQP7O14520 342 aa8.57□□□□□ -1.04
UBFD1-202ENST00000563366 MRPL33O75394 65 aaKnown RBP8.57□□□□□ -1.04
UBFD1-202ENST00000563366 RPP14O95059 124 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms