RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 DLSTP36957 453 aa16.98■□□□□ 0.31
SMPD3-203ENST00000563226 B3GALT5-AS1P59052 145 aa16.98■□□□□ 0.31
SMPD3-203ENST00000563226 GPR85P60893 370 aa16.98■□□□□ 0.31
SMPD3-203ENST00000563226 PITPNAQ00169 270 aa16.98■□□□□ 0.31
SMPD3-203ENST00000563226 HIST3H3Q16695 136 aa16.98■□□□□ 0.31
SMPD3-203ENST00000563226 YRDCQ86U90 279 aaKnown RBP16.98■□□□□ 0.31
SMPD3-203ENST00000563226 OR6F1Q8NGZ6 308 aa16.98■□□□□ 0.31
SMPD3-203ENST00000563226 CACNG2Q9Y698 323 aa16.98■□□□□ 0.31
SMPD3-203ENST00000563226 CCDC187A0A096LP49 1063 aa16.98■□□□□ 0.31
SMPD3-203ENST00000563226 A0A0J9YW62 118 aa16.98■□□□□ 0.31
SMPD3-203ENST00000563226 LOC102725191A0A1B0GVB3 256 aa16.98■□□□□ 0.31
SMPD3-203ENST00000563226 LMX1BO60663 402 aa16.98■□□□□ 0.31
SMPD3-203ENST00000563226 QDPRP09417 244 aa16.98■□□□□ 0.31
SMPD3-203ENST00000563226 RFPL3SP0C7P2 107 aa16.98■□□□□ 0.31
SMPD3-203ENST00000563226 TMIGD3P0DMS9 266 aaPredicted RBP16.98■□□□□ 0.31
SMPD3-203ENST00000563226 NKX2-5P52952 324 aaPredicted RBP16.98■□□□□ 0.31
SMPD3-203ENST00000563226 CLDN20P56880 219 aa16.98■□□□□ 0.31
SMPD3-203ENST00000563226 TMEM9BQ9NQ34 198 aa16.98■□□□□ 0.31
SMPD3-203ENST00000563226 DEPPQ9NTK1 212 aa16.98■□□□□ 0.31
SMPD3-203ENST00000563226 TAS2R4Q9NYW5 299 aa16.98■□□□□ 0.31
SMPD3-203ENST00000563226 FOXJ3Q9UPW0 622 aa16.98■□□□□ 0.31
SMPD3-203ENST00000563226 KNTC1P50748 2209 aa16.98■□□□□ 0.31
SMPD3-203ENST00000563226 LOC107986453A0A1B0GWG9 222 aa16.97■□□□□ 0.31
SMPD3-203ENST00000563226 LRRC3CA6NJW4 275 aa16.97■□□□□ 0.31
SMPD3-203ENST00000563226 TNFSF11O14788 317 aa16.97■□□□□ 0.31
SMPD3-203ENST00000563226 ZNF17P17021 662 aa16.97■□□□□ 0.31
SMPD3-203ENST00000563226 SLC6A1P30531 599 aa16.97■□□□□ 0.31
SMPD3-203ENST00000563226 TATDN3Q17R31 274 aa16.97■□□□□ 0.31
SMPD3-203ENST00000563226 BAIAP2L2Q6UXY1 529 aa16.97■□□□□ 0.31
SMPD3-203ENST00000563226 LINGO2Q7L985 606 aa16.97■□□□□ 0.31
SMPD3-203ENST00000563226 SIAH3Q8IW03 269 aa16.97■□□□□ 0.31
SMPD3-203ENST00000563226 UBASH3BQ8TF42 649 aa16.97■□□□□ 0.31
SMPD3-203ENST00000563226 SRXN1Q9BYN0 137 aa16.97■□□□□ 0.31
SMPD3-203ENST00000563226 KCNK15Q9H427 330 aa16.97■□□□□ 0.31
SMPD3-203ENST00000563226 GDF2Q9UK05 429 aaPredicted RBP16.97■□□□□ 0.31
SMPD3-203ENST00000563226 ZNF726A6NNF4 738 aa16.97■□□□□ 0.31
SMPD3-203ENST00000563226 TERTO14746 1132 aaKnown RBP16.97■□□□□ 0.31
SMPD3-203ENST00000563226 TMEM127O75204 238 aa16.97■□□□□ 0.31
SMPD3-203ENST00000563226 SPEM2Q0P670 501 aa16.97■□□□□ 0.31
SMPD3-203ENST00000563226 PLA1AQ53H76 456 aa16.97■□□□□ 0.31
SMPD3-203ENST00000563226 PHYHD1Q5SRE7 291 aa16.97■□□□□ 0.31
SMPD3-203ENST00000563226 HES3Q5TGS1 186 aa16.97■□□□□ 0.31
SMPD3-203ENST00000563226 DEGS2Q6QHC5 323 aa16.97■□□□□ 0.31
SMPD3-203ENST00000563226 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.97■□□□□ 0.31
SMPD3-203ENST00000563226 SMIM4Q8WVI0 70 aa16.97■□□□□ 0.31
SMPD3-203ENST00000563226 ZNF385AQ96PM9 386 aaKnown RBP16.97■□□□□ 0.31
SMPD3-203ENST00000563226 C1orf198Q9H425 327 aa16.97■□□□□ 0.31
SMPD3-203ENST00000563226 FAM206AQ9NX38 181 aa16.97■□□□□ 0.31
SMPD3-203ENST00000563226 STEAP1Q9UHE8 339 aa16.97■□□□□ 0.31
SMPD3-203ENST00000563226 NUFIP1Q9UHK0 495 aaKnown RBP16.97■□□□□ 0.31
SMPD3-203ENST00000563226 PINLYPA6NC86 204 aa16.96■□□□□ 0.31
SMPD3-203ENST00000563226 P2RY10O00398 339 aa16.96■□□□□ 0.31
SMPD3-203ENST00000563226 CTDSPLO15194 276 aa16.96■□□□□ 0.31
SMPD3-203ENST00000563226 GSTZ1O43708 216 aaPredicted RBP16.96■□□□□ 0.31
SMPD3-203ENST00000563226 ITGA5P08648 1049 aa16.96■□□□□ 0.31
SMPD3-203ENST00000563226 PTHLHP12272 177 aa16.96■□□□□ 0.31
SMPD3-203ENST00000563226 PTH2RP49190 550 aa16.96■□□□□ 0.31
SMPD3-203ENST00000563226 RAC1P63000 192 aa16.96■□□□□ 0.31
SMPD3-203ENST00000563226 ATAD3CQ5T2N8 411 aa16.96■□□□□ 0.31
SMPD3-203ENST00000563226 CREB3L2Q70SY1 520 aa16.96■□□□□ 0.31
SMPD3-203ENST00000563226 HDDC2Q7Z4H3 204 aa16.96■□□□□ 0.31
SMPD3-203ENST00000563226 TOMM5Q8N4H5 51 aa16.96■□□□□ 0.31
SMPD3-203ENST00000563226 PLPP7Q8NBV4 271 aa16.96■□□□□ 0.31
SMPD3-203ENST00000563226 THRSPQ92748 146 aa16.96■□□□□ 0.31
SMPD3-203ENST00000563226 THOC3Q96J01 351 aaKnown RBP16.96■□□□□ 0.31
SMPD3-203ENST00000563226 ST6GAL2Q96JF0 529 aa16.96■□□□□ 0.31
SMPD3-203ENST00000563226 PIGQQ9BRB3 760 aa16.96■□□□□ 0.31
SMPD3-203ENST00000563226 MARVELD1Q9BSK0 173 aa16.96■□□□□ 0.31
SMPD3-203ENST00000563226 POU2F3Q9UKI9 436 aa16.96■□□□□ 0.31
SMPD3-203ENST00000563226 POLR1DQ9Y2S0 133 aa16.96■□□□□ 0.31
SMPD3-203ENST00000563226 ALG5Q9Y673 324 aa16.96■□□□□ 0.31
SMPD3-203ENST00000563226 ENPP1P22413 925 aa16.95■□□□□ 0.3
SMPD3-203ENST00000563226 CDK2P24941 298 aa16.95■□□□□ 0.3
SMPD3-203ENST00000563226 SRD5A2P31213 254 aa16.95■□□□□ 0.3
SMPD3-203ENST00000563226 RAB25P57735 213 aa16.95■□□□□ 0.3
SMPD3-203ENST00000563226 OR51D1Q8NGF3 324 aa16.95■□□□□ 0.3
SMPD3-203ENST00000563226 OR51A2Q8NGJ7 313 aa16.95■□□□□ 0.3
SMPD3-203ENST00000563226 OR13C3Q8NGS6 347 aa16.95■□□□□ 0.3
SMPD3-203ENST00000563226 HAVCR1Q96D42 359 aa16.95■□□□□ 0.3
SMPD3-203ENST00000563226 MRI1Q9BV20 369 aa16.95■□□□□ 0.3
SMPD3-203ENST00000563226 HHLA2Q9UM44 414 aa16.95■□□□□ 0.3
SMPD3-203ENST00000563226 ETV7Q9Y603 341 aa16.95■□□□□ 0.3
SMPD3-203ENST00000563226 PCNX2A6NKB5 2137 aa16.95■□□□□ 0.3
SMPD3-203ENST00000563226 HMX3A6NHT5 357 aa16.95■□□□□ 0.3
SMPD3-203ENST00000563226 ISG15P05161 165 aa16.95■□□□□ 0.3
SMPD3-203ENST00000563226 IGFBP3P17936 291 aaPredicted RBP16.95■□□□□ 0.3
SMPD3-203ENST00000563226 ACHEP22303 614 aa16.95■□□□□ 0.3
SMPD3-203ENST00000563226 MMP16P51512 607 aa16.95■□□□□ 0.3
SMPD3-203ENST00000563226 EFNB2P52799 333 aa16.95■□□□□ 0.3
SMPD3-203ENST00000563226 ART1P52961 327 aa16.95■□□□□ 0.3
SMPD3-203ENST00000563226 OC90Q02509 493 aaPredicted RBP16.95■□□□□ 0.3
SMPD3-203ENST00000563226 CBX3Q13185 183 aa16.95■□□□□ 0.3
SMPD3-203ENST00000563226 TBRG1Q3YBR2 411 aa16.95■□□□□ 0.3
SMPD3-203ENST00000563226 BCL2L15Q5TBC7 163 aa16.95■□□□□ 0.3
SMPD3-203ENST00000563226 TMEM164Q5U3C3 297 aa16.95■□□□□ 0.3
SMPD3-203ENST00000563226 HACD4Q5VWC8 232 aa16.95■□□□□ 0.3
SMPD3-203ENST00000563226 UTS2BQ765I0 119 aa16.95■□□□□ 0.3
SMPD3-203ENST00000563226 ZBTB8BQ8NAP8 495 aaPredicted RBP16.95■□□□□ 0.3
SMPD3-203ENST00000563226 DDX28Q9NUL7 540 aaKnown RBP16.95■□□□□ 0.3
SMPD3-203ENST00000563226 ASH2LQ9UBL3 628 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms