RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 CCR4P51679 360 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 ZNF41P51814 821 aaPredicted RBP3.97□□□□□ -1.77
SMG1-206ENST00000562668 MNAT1P51948 309 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 POLR2HP52434 150 aaKnown RBP3.97□□□□□ -1.77
SMG1-206ENST00000562668 H3F3AP84243 136 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 VLDLRP98155 873 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 MERTKQ12866 999 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 BNIP2Q12982 314 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 TOMM20Q15388 145 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 TAF11Q15544 211 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 OR1Q1Q15612 314 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 ZNF239Q16600 458 aaKnown RBP3.97□□□□□ -1.77
SMG1-206ENST00000562668 LRRC23Q53EV4 343 aaPredicted RBP3.97□□□□□ -1.77
SMG1-206ENST00000562668 WLSQ5T9L3 541 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 RAET1LQ5VY80 246 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 GLYATQ6IB77 296 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 LCN8Q6JVE9 175 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 C3orf33Q6P1S2 294 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 ENPP6Q6UWR7 440 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 NHLRC1Q6VVB1 395 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 ZNF550Q7Z398 422 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.97□□□□□ -1.77
SMG1-206ENST00000562668 CARM1Q86X55 608 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 PM20D2Q8IYS1 436 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 C1orf87Q8N0U7 546 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 ARHGAP24Q8N264 748 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 TMCO5AQ8N6Q1 288 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 ACBD4Q8NC06 268 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 TNIP2Q8NFZ5 429 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 OR10D3Q8NH80 312 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 OR2V1Q8NHB1 315 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 ITLN2Q8WWU7 325 aaPredicted RBP3.97□□□□□ -1.77
SMG1-206ENST00000562668 RASSF5Q8WWW0 418 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 TMEM234Q8WY98 164 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 SLC38A4Q969I6 547 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 KLHL15Q96M94 604 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 MCHR1Q99705 422 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 KCTD14Q9BQ13 255 aaPredicted RBP3.97□□□□□ -1.77
SMG1-206ENST00000562668 ZNF559Q9BR84 538 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 BTBD10Q9BSF8 475 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 FUZQ9BT04 418 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 OR11A1Q9GZK7 315 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 EGLN1Q9GZT9 426 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 LRMDAQ9H2I8 198 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 TMEM185BQ9H7F4 350 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 CALHM2Q9HA72 323 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 NDE1Q9NXR1 346 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 ADA2Q9NZK5 511 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 ACTR3BQ9P1U1 418 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 CHRNA9Q9UGM1 479 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 SLC7A8Q9UHI5 535 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 PRPF19Q9UMS4 504 aaKnown RBP3.97□□□□□ -1.77
SMG1-206ENST00000562668 TMED7Q9Y3B3 224 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 MPDZO75970 2070 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 NBASA2RRP1 2371 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 ESPL1Q14674 2120 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 SVILO95425 2214 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 DOPEY1Q5JWR5 2465 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 TRGV8A0A0C4DH27 118 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 A0A1B0GUH1 482 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 LIPT2A6NK58 231 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 ZNF716A6NP11 495 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 LRRN3E7EW58 273 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 CCL21O00585 134 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 TNFSF11O14788 317 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 SEC14L5O43304 696 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 CHP2O43745 196 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 CXCL13O43927 109 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 RAMP1O60894 148 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 RCBTB2O95199 551 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 OR5F1O95221 314 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 NUDT14O95848 222 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 BGLAPP02818 100 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 HEXAP06865 529 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 HOXD4P09016 255 aaPredicted RBP3.96□□□□□ -1.78
SMG1-206ENST00000562668 TSPAN19P0C672 248 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 GP1BBP13224 206 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 GABRA1P14867 456 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 TCN1P20061 433 aaPredicted RBP3.96□□□□□ -1.78
SMG1-206ENST00000562668 CCNA2P20248 432 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 ME2P23368 584 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 EDNRAP25101 427 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 SFTPDP35247 375 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 PTGER4P35408 488 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 MAGEA2P43356 314 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 CLK1P49759 484 aaKnown RBP3.96□□□□□ -1.78
SMG1-206ENST00000562668 UGT2B15P54855 530 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 RGS8P57771 180 aaPredicted RBP3.96□□□□□ -1.78
SMG1-206ENST00000562668 SRYQ05066 204 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 RBPJQ06330 500 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 TFF3Q07654 80 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 TRAP1Q12931 704 aaKnown RBP3.96□□□□□ -1.78
SMG1-206ENST00000562668 TMEM176BQ3YBM2 270 aaPredicted RBP3.96□□□□□ -1.78
SMG1-206ENST00000562668 IFI44LQ53G44 452 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 SYT14P1Q58G82 188 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 RIPPLY2Q5TAB7 128 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 ZNF613Q6PF04 617 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 ULK3Q6PHR2 472 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 KCTD18Q6PI47 426 aaPredicted RBP3.96□□□□□ -1.78
SMG1-206ENST00000562668 TMPPEQ6ZT21 453 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms