RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 CCDC59Q9P031 241 aaKnown RBP12.6□□□□□ -0.39
COMMD4-205ENST00000562310 GDF2Q9UK05 429 aaPredicted RBP12.6□□□□□ -0.39
COMMD4-205ENST00000562310 LRP12Q9Y561 859 aa12.6□□□□□ -0.39
COMMD4-205ENST00000562310 SIRT4Q9Y6E7 314 aaPredicted RBP12.6□□□□□ -0.39
COMMD4-205ENST00000562310 ANKRD11Q6UB99 2663 aaPredicted RBP12.59□□□□□ -0.39
COMMD4-205ENST00000562310 CD8B2A6NJW9 211 aa12.59□□□□□ -0.39
COMMD4-205ENST00000562310 TMEM212A6NML5 194 aa12.59□□□□□ -0.39
COMMD4-205ENST00000562310 PSMD9O00233 223 aa12.59□□□□□ -0.39
COMMD4-205ENST00000562310 TAF4O00268 1085 aa12.59□□□□□ -0.39
COMMD4-205ENST00000562310 GABRPO00591 440 aa12.59□□□□□ -0.39
COMMD4-205ENST00000562310 WDR1O75083 606 aa12.59□□□□□ -0.39
COMMD4-205ENST00000562310 RPP14O95059 124 aaKnown RBP12.59□□□□□ -0.39
COMMD4-205ENST00000562310 CST2P09228 141 aa12.59□□□□□ -0.39
COMMD4-205ENST00000562310 H2BFMP0C1H6 154 aa12.59□□□□□ -0.39
COMMD4-205ENST00000562310 FAM87AP0C7U9 286 aa12.59□□□□□ -0.39
COMMD4-205ENST00000562310 PSMB10P40306 273 aa12.59□□□□□ -0.39
COMMD4-205ENST00000562310 OPRL1P41146 370 aa12.59□□□□□ -0.39
COMMD4-205ENST00000562310 CCR9P51686 369 aa12.59□□□□□ -0.39
COMMD4-205ENST00000562310 FABP5Q01469 135 aa12.59□□□□□ -0.39
COMMD4-205ENST00000562310 ENDOGQ14249 297 aaKnown RBP12.59□□□□□ -0.39
COMMD4-205ENST00000562310 DGUOKQ16854 277 aa12.59□□□□□ -0.39
COMMD4-205ENST00000562310 EIF2S3LQ2VIR3 472 aaKnown RBP12.59□□□□□ -0.39
COMMD4-205ENST00000562310 CEACAM16Q2WEN9 425 aa12.59□□□□□ -0.39
COMMD4-205ENST00000562310 LINC00303Q3SY05 128 aa12.59□□□□□ -0.39
COMMD4-205ENST00000562310 YIF1BQ5BJH7 314 aa12.59□□□□□ -0.39
COMMD4-205ENST00000562310 TSPO2Q5TGU0 170 aa12.59□□□□□ -0.39
COMMD4-205ENST00000562310 ZNF324BQ6AW86 544 aaPredicted RBP12.59□□□□□ -0.39
COMMD4-205ENST00000562310 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.59□□□□□ -0.39
COMMD4-205ENST00000562310 GJC3Q8NFK1 279 aa12.59□□□□□ -0.39
COMMD4-205ENST00000562310 OR2G2Q8NGZ5 317 aa12.59□□□□□ -0.39
COMMD4-205ENST00000562310 DYNC2LI1Q8TCX1 351 aa12.59□□□□□ -0.39
COMMD4-205ENST00000562310 PHYHIPQ92561 330 aa12.59□□□□□ -0.39
COMMD4-205ENST00000562310 GHSRQ92847 366 aa12.59□□□□□ -0.39
COMMD4-205ENST00000562310 FOXB1Q99853 325 aa12.59□□□□□ -0.39
COMMD4-205ENST00000562310 ZNF416Q9BWM5 594 aa12.59□□□□□ -0.39
COMMD4-205ENST00000562310 COMMD4Q9H0A8 199 aa12.59□□□□□ -0.39
COMMD4-205ENST00000562310 ASH2LQ9UBL3 628 aa12.59□□□□□ -0.39
COMMD4-205ENST00000562310 UPB1Q9UBR1 384 aa12.59□□□□□ -0.39
COMMD4-205ENST00000562310 CLEC4AQ9UMR7 237 aa12.59□□□□□ -0.39
COMMD4-205ENST00000562310 EMC9Q9Y3B6 208 aa12.59□□□□□ -0.39
COMMD4-205ENST00000562310 R4GMQ9 66 aa12.59□□□□□ -0.39
COMMD4-205ENST00000562310 FIGNL2A6NMB9 653 aa12.58□□□□□ -0.4
COMMD4-205ENST00000562310 GATBO75879 557 aaKnown RBP12.58□□□□□ -0.4
COMMD4-205ENST00000562310 FARS2O95363 451 aaKnown RBP12.58□□□□□ -0.4
COMMD4-205ENST00000562310 IL1AP01583 271 aa12.58□□□□□ -0.4
COMMD4-205ENST00000562310 HOXD4P09016 255 aaPredicted RBP12.58□□□□□ -0.4
COMMD4-205ENST00000562310 ZNF182P17025 639 aaPredicted RBP12.58□□□□□ -0.4
COMMD4-205ENST00000562310 OR3A2P47893 321 aa12.58□□□□□ -0.4
COMMD4-205ENST00000562310 PCBD1P61457 104 aa12.58□□□□□ -0.4
COMMD4-205ENST00000562310 GRB2P62993 217 aaKnown RBP12.58□□□□□ -0.4
COMMD4-205ENST00000562310 HIST1H3AP68431 136 aa12.58□□□□□ -0.4
COMMD4-205ENST00000562310 SCRN3Q0VDG4 424 aa12.58□□□□□ -0.4
COMMD4-205ENST00000562310 HIST2H3PS2Q5TEC6 136 aa12.58□□□□□ -0.4
COMMD4-205ENST00000562310 OTPQ5XKR4 325 aa12.58□□□□□ -0.4
COMMD4-205ENST00000562310 NSUN5P2Q63ZY6 315 aa12.58□□□□□ -0.4
COMMD4-205ENST00000562310 C22orf42Q6IC83 251 aa12.58□□□□□ -0.4
COMMD4-205ENST00000562310 OR7E24Q6IFN5 339 aa12.58□□□□□ -0.4
COMMD4-205ENST00000562310 CORO6Q6QEF8 472 aa12.58□□□□□ -0.4
COMMD4-205ENST00000562310 KLHL24Q6TFL4 600 aa12.58□□□□□ -0.4
COMMD4-205ENST00000562310 CFAP77Q6ZQR2 320 aa12.58□□□□□ -0.4
COMMD4-205ENST00000562310 HIST2H3AQ71DI3 136 aa12.58□□□□□ -0.4
COMMD4-205ENST00000562310 ZNF627Q7L945 461 aa12.58□□□□□ -0.4
COMMD4-205ENST00000562310 FGD2Q7Z6J4 655 aa12.58□□□□□ -0.4
COMMD4-205ENST00000562310 SYT9Q86SS6 491 aa12.58□□□□□ -0.4
COMMD4-205ENST00000562310 Q8NA96 180 aa12.58□□□□□ -0.4
COMMD4-205ENST00000562310 OR5M9Q8NGP3 310 aa12.58□□□□□ -0.4
COMMD4-205ENST00000562310 OR5AK2Q8NH90 309 aa12.58□□□□□ -0.4
COMMD4-205ENST00000562310 RNF166Q96A37 237 aaPredicted RBP12.58□□□□□ -0.4
COMMD4-205ENST00000562310 MAP6Q96JE9 813 aa12.58□□□□□ -0.4
COMMD4-205ENST00000562310 C4orf45Q96LM5 186 aa12.58□□□□□ -0.4
COMMD4-205ENST00000562310 MED18Q9BUE0 208 aa12.58□□□□□ -0.4
COMMD4-205ENST00000562310 MOB1AQ9H8S9 216 aa12.58□□□□□ -0.4
COMMD4-205ENST00000562310 ZNF71Q9NQZ8 489 aaPredicted RBP12.58□□□□□ -0.4
COMMD4-205ENST00000562310 SLC7A10Q9NS82 523 aa12.58□□□□□ -0.4
COMMD4-205ENST00000562310 LUZP4Q9P127 313 aa12.58□□□□□ -0.4
COMMD4-205ENST00000562310 MALT1Q9UDY8 824 aa12.58□□□□□ -0.4
COMMD4-205ENST00000562310 ZNF281Q9Y2X9 895 aa12.58□□□□□ -0.4
COMMD4-205ENST00000562310 MED12LQ86YW9 2145 aa12.58□□□□□ -0.4
COMMD4-205ENST00000562310 MAPK3P27361 379 aaPredicted RBP12.57□□□□□ -0.4
COMMD4-205ENST00000562310 SOX6P35712 828 aa12.57□□□□□ -0.4
COMMD4-205ENST00000562310 NANOS3P60323 173 aaKnown RBP12.57□□□□□ -0.4
COMMD4-205ENST00000562310 LSAMPQ13449 338 aa12.57□□□□□ -0.4
COMMD4-205ENST00000562310 GUSBP1Q15486 140 aa12.57□□□□□ -0.4
COMMD4-205ENST00000562310 TAF13Q15543 124 aa12.57□□□□□ -0.4
COMMD4-205ENST00000562310 SOWAHCQ53LP3 525 aaPredicted RBP12.57□□□□□ -0.4
COMMD4-205ENST00000562310 PLXDC2Q6UX71 529 aa12.57□□□□□ -0.4
COMMD4-205ENST00000562310 SPATC1Q76KD6 591 aa12.57□□□□□ -0.4
COMMD4-205ENST00000562310 LINGO2Q7L985 606 aa12.57□□□□□ -0.4
COMMD4-205ENST00000562310 NUFIP2Q7Z417 695 aaKnown RBP12.57□□□□□ -0.4
COMMD4-205ENST00000562310 ABHD4Q8TB40 342 aa12.57□□□□□ -0.4
COMMD4-205ENST00000562310 TRMT61AQ96FX7 289 aaKnown RBP12.57□□□□□ -0.4
COMMD4-205ENST00000562310 ZFP3Q96NJ6 502 aa12.57□□□□□ -0.4
COMMD4-205ENST00000562310 HDHD5Q9BXW7 423 aa12.57□□□□□ -0.4
COMMD4-205ENST00000562310 CENPMQ9NSP4 180 aa12.57□□□□□ -0.4
COMMD4-205ENST00000562310 DDX28Q9NUL7 540 aaKnown RBP12.57□□□□□ -0.4
COMMD4-205ENST00000562310 GALNT8Q9NY28 637 aa12.57□□□□□ -0.4
COMMD4-205ENST00000562310 IGF2RP11717 2491 aa12.57□□□□□ -0.4
COMMD4-205ENST00000562310 FAM208BQ5VWN6 2430 aa12.57□□□□□ -0.4
COMMD4-205ENST00000562310 DOCK7Q96N67 2140 aa12.56□□□□□ -0.4
COMMD4-205ENST00000562310 PHF3Q92576 2039 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms