RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 CCNB1IP1Q9NPC3 277 aa11.6□□□□□ -0.55
CDH1-204ENST00000562118 C8orf4Q9NR00 106 aa11.6□□□□□ -0.55
CDH1-204ENST00000562118 CISD1Q9NZ45 108 aaKnown RBP11.6□□□□□ -0.55
CDH1-204ENST00000562118 ASH2LQ9UBL3 628 aa11.6□□□□□ -0.55
CDH1-204ENST00000562118 MAP1AP78559 2803 aaPredicted RBP11.59□□□□□ -0.55
CDH1-204ENST00000562118 CCDC182A6NF36 153 aa11.59□□□□□ -0.55
CDH1-204ENST00000562118 FAM183AA6NL82 134 aa11.59□□□□□ -0.55
CDH1-204ENST00000562118 PRKYO43930 277 aa11.59□□□□□ -0.55
CDH1-204ENST00000562118 SOD3P08294 240 aa11.59□□□□□ -0.55
CDH1-204ENST00000562118 PYCR1P32322 319 aa11.59□□□□□ -0.55
CDH1-204ENST00000562118 GGTLC2Q14390 218 aa11.59□□□□□ -0.55
CDH1-204ENST00000562118 RAB35Q15286 201 aa11.59□□□□□ -0.55
CDH1-204ENST00000562118 TESK1Q15569 626 aa11.59□□□□□ -0.55
CDH1-204ENST00000562118 EFNB3Q15768 340 aa11.59□□□□□ -0.55
CDH1-204ENST00000562118 MEP1BQ16820 701 aa11.59□□□□□ -0.55
CDH1-204ENST00000562118 RSPO1Q2MKA7 263 aaPredicted RBP11.59□□□□□ -0.55
CDH1-204ENST00000562118 MST1LQ2TV78 715 aa11.59□□□□□ -0.55
CDH1-204ENST00000562118 SLC25A30Q5SVS4 291 aa11.59□□□□□ -0.55
CDH1-204ENST00000562118 ALKBH2Q6NS38 261 aa11.59□□□□□ -0.55
CDH1-204ENST00000562118 SLC22A25Q6T423 547 aa11.59□□□□□ -0.55
CDH1-204ENST00000562118 LYPD4Q6UWN0 246 aa11.59□□□□□ -0.55
CDH1-204ENST00000562118 PACRGLQ8N7B6 248 aa11.59□□□□□ -0.55
CDH1-204ENST00000562118 PROKR2Q8NFJ6 384 aa11.59□□□□□ -0.55
CDH1-204ENST00000562118 FOXN4Q96NZ1 517 aa11.59□□□□□ -0.55
CDH1-204ENST00000562118 COQ7Q99807 217 aa11.59□□□□□ -0.55
CDH1-204ENST00000562118 TRAF4Q9BUZ4 470 aaPredicted RBP11.59□□□□□ -0.55
CDH1-204ENST00000562118 PRRG3Q9BZD7 231 aa11.59□□□□□ -0.55
CDH1-204ENST00000562118 DCLRE1BQ9H816 532 aa11.59□□□□□ -0.55
CDH1-204ENST00000562118 CA10Q9NS85 328 aa11.59□□□□□ -0.55
CDH1-204ENST00000562118 DDX28Q9NUL7 540 aaKnown RBP11.59□□□□□ -0.55
CDH1-204ENST00000562118 ZNF701Q9NV72 531 aaPredicted RBP11.59□□□□□ -0.55
CDH1-204ENST00000562118 NDRG4Q9ULP0 352 aaKnown RBP11.59□□□□□ -0.55
CDH1-204ENST00000562118 IQCMA0A1B0GVH7 501 aa11.58□□□□□ -0.56
CDH1-204ENST00000562118 ERICH4A6NGS2 130 aa11.58□□□□□ -0.56
CDH1-204ENST00000562118 PRR23D1E9PI22 279 aaPredicted RBP11.58□□□□□ -0.56
CDH1-204ENST00000562118 SGCEO43556 437 aa11.58□□□□□ -0.56
CDH1-204ENST00000562118 GYPBP06028 91 aa11.58□□□□□ -0.56
CDH1-204ENST00000562118 PRR23D2P0DMB1 279 aaPredicted RBP11.58□□□□□ -0.56
CDH1-204ENST00000562118 PAICSP22234 425 aaKnown RBP11.58□□□□□ -0.56
CDH1-204ENST00000562118 STOMP27105 288 aa11.58□□□□□ -0.56
CDH1-204ENST00000562118 APEX1P27695 318 aaKnown RBP11.58□□□□□ -0.56
CDH1-204ENST00000562118 OTX1P32242 354 aaPredicted RBP11.58□□□□□ -0.56
CDH1-204ENST00000562118 TTKP33981 857 aa11.58□□□□□ -0.56
CDH1-204ENST00000562118 GLRXP35754 106 aa11.58□□□□□ -0.56
CDH1-204ENST00000562118 WNT5AP41221 380 aa11.58□□□□□ -0.56
CDH1-204ENST00000562118 RAD23AP54725 363 aa11.58□□□□□ -0.56
CDH1-204ENST00000562118 ADIPOQQ15848 244 aa11.58□□□□□ -0.56
CDH1-204ENST00000562118 MSMPQ1L6U9 139 aa11.58□□□□□ -0.56
CDH1-204ENST00000562118 SWI5Q1ZZU3 235 aa11.58□□□□□ -0.56
CDH1-204ENST00000562118 TBC1D28Q2M2D7 210 aa11.58□□□□□ -0.56
CDH1-204ENST00000562118 OGFRL1Q5TC84 451 aaPredicted RBP11.58□□□□□ -0.56
CDH1-204ENST00000562118 NXNL2Q5VZ03 156 aa11.58□□□□□ -0.56
CDH1-204ENST00000562118 FBXW10Q5XX13 1052 aa11.58□□□□□ -0.56
CDH1-204ENST00000562118 ZNF774Q6NX45 483 aa11.58□□□□□ -0.56
CDH1-204ENST00000562118 PLBD1Q6P4A8 553 aa11.58□□□□□ -0.56
CDH1-204ENST00000562118 CFAP77Q6ZQR2 320 aa11.58□□□□□ -0.56
CDH1-204ENST00000562118 RHOUQ7L0Q8 258 aa11.58□□□□□ -0.56
CDH1-204ENST00000562118 CPOQ8IVL8 374 aa11.58□□□□□ -0.56
CDH1-204ENST00000562118 C1orf174Q8IYL3 243 aa11.58□□□□□ -0.56
CDH1-204ENST00000562118 DEPDC4Q8N2C3 294 aa11.58□□□□□ -0.56
CDH1-204ENST00000562118 BBS1Q8NFJ9 593 aa11.58□□□□□ -0.56
CDH1-204ENST00000562118 GJC3Q8NFK1 279 aa11.58□□□□□ -0.56
CDH1-204ENST00000562118 OR10S1Q8NGN2 331 aa11.58□□□□□ -0.56
CDH1-204ENST00000562118 OR1J2Q8NGS2 313 aa11.58□□□□□ -0.56
CDH1-204ENST00000562118 AKR7LQ8NHP1 331 aa11.58□□□□□ -0.56
CDH1-204ENST00000562118 TMEM163Q8TC26 289 aa11.58□□□□□ -0.56
CDH1-204ENST00000562118 ST7LQ8TDW4 575 aa11.58□□□□□ -0.56
CDH1-204ENST00000562118 SMAP2Q8WU79 429 aaPredicted RBP11.58□□□□□ -0.56
CDH1-204ENST00000562118 IPCEF1Q8WWN9 437 aaPredicted RBP11.58□□□□□ -0.56
CDH1-204ENST00000562118 MAP6Q96JE9 813 aa11.58□□□□□ -0.56
CDH1-204ENST00000562118 TEX12Q9BXU0 123 aa11.58□□□□□ -0.56
CDH1-204ENST00000562118 HDHD2Q9H0R4 259 aa11.58□□□□□ -0.56
CDH1-204ENST00000562118 MED20Q9H944 212 aa11.58□□□□□ -0.56
CDH1-204ENST00000562118 WDR76Q9H967 626 aa11.58□□□□□ -0.56
CDH1-204ENST00000562118 UBTD1Q9HAC8 227 aa11.58□□□□□ -0.56
CDH1-204ENST00000562118 BEX4Q9NWD9 120 aaPredicted RBP11.58□□□□□ -0.56
CDH1-204ENST00000562118 HAO2Q9NYQ3 351 aa11.58□□□□□ -0.56
CDH1-204ENST00000562118 GDF2Q9UK05 429 aaPredicted RBP11.58□□□□□ -0.56
CDH1-204ENST00000562118 CHD3Q12873 2000 aaKnown RBP11.58□□□□□ -0.56
CDH1-204ENST00000562118 FAM171A2A8MVW0 826 aa11.57□□□□□ -0.56
CDH1-204ENST00000562118 H3BSA7 217 aa11.57□□□□□ -0.56
CDH1-204ENST00000562118 J3QW42 95 aa11.57□□□□□ -0.56
CDH1-204ENST00000562118 RER1O15258 196 aa11.57□□□□□ -0.56
CDH1-204ENST00000562118 SLC16A6O15403 523 aa11.57□□□□□ -0.56
CDH1-204ENST00000562118 DOK2O60496 412 aa11.57□□□□□ -0.56
CDH1-204ENST00000562118 GABRB1P18505 474 aa11.57□□□□□ -0.56
CDH1-204ENST00000562118 FMO3P31513 532 aa11.57□□□□□ -0.56
CDH1-204ENST00000562118 APOBEC3AP31941 199 aaPredicted RBP11.57□□□□□ -0.56
CDH1-204ENST00000562118 EVX1P49640 407 aa11.57□□□□□ -0.56
CDH1-204ENST00000562118 ENTPD1P49961 510 aa11.57□□□□□ -0.56
CDH1-204ENST00000562118 PLP2Q04941 152 aa11.57□□□□□ -0.56
CDH1-204ENST00000562118 SNAPC1Q16533 368 aa11.57□□□□□ -0.56
CDH1-204ENST00000562118 ELFN2Q5R3F8 820 aa11.57□□□□□ -0.56
CDH1-204ENST00000562118 OTPQ5XKR4 325 aa11.57□□□□□ -0.56
CDH1-204ENST00000562118 COLCA1Q6ZS62 124 aa11.57□□□□□ -0.56
CDH1-204ENST00000562118 ZBTB49Q6ZSB9 765 aa11.57□□□□□ -0.56
CDH1-204ENST00000562118 CXXC5Q7LFL8 322 aaKnown RBP11.57□□□□□ -0.56
CDH1-204ENST00000562118 ALDH16A1Q8IZ83 802 aa11.57□□□□□ -0.56
CDH1-204ENST00000562118 LRRC75A-AS1Q8N1F1 130 aa11.57□□□□□ -0.56
CDH1-204ENST00000562118 ZNF511Q8NB15 262 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms