RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 DGCR6Q14129 220 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 HNF4GQ14541 408 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 TWIST1Q15672 202 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 NPTX1Q15818 432 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 ZNF829Q3KNS6 432 aaPredicted RBP2.78□□□□□ -1.96
SPG11-225ENST00000561391 TIMM50Q3ZCQ8 353 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 GTDC1Q4AE62 458 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 IQCCQ4KMZ1 466 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 BEX5Q5H9J7 111 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 TOR1AIP1Q5JTV8 583 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 TCTE1Q5JU00 501 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 SLC25A30Q5SVS4 291 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 DCST1Q5T197 706 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 SYT6Q5T7P8 510 aaPredicted RBP2.78□□□□□ -1.96
SPG11-225ENST00000561391 MEDAGQ5VYS4 303 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 RNLSQ5VYX0 342 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 AP1ARQ63HQ0 302 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 ANKRD26P1Q6NSI1 321 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 SLC48A1Q6P1K1 146 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 PAPD4Q6PIY7 484 aaKnown RBP2.78□□□□□ -1.96
SPG11-225ENST00000561391 TBPL2Q6SJ96 375 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 KCTD8Q6ZWB6 473 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 USP43Q70EL4 1123 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 TUBA1AQ71U36 451 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 PRSS48Q7RTY5 328 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 ANKRD37Q7Z713 158 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 CLVS1Q8IUQ0 354 aaPredicted RBP2.78□□□□□ -1.96
SPG11-225ENST00000561391 PEX5LQ8IYB4 626 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 OFCC1Q8IZS5 231 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 SLC43A2Q8N370 569 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 TMCO5AQ8N6Q1 288 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 FAM86B1Q8N7N1 296 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 ZDHHC22Q8N966 263 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 LINC01555Q8NAE3 123 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 ZNF740Q8NDX6 193 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 OR10G2Q8NGC3 310 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 OR4K14Q8NGD5 310 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 OR4C15Q8NGM1 316 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 OR13F1Q8NGS4 319 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 LILRB1Q8NHL6 650 aaPredicted RBP2.78□□□□□ -1.96
SPG11-225ENST00000561391 RHOXF1Q8NHV9 184 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 FLVCR1-AS1Q8TAF5 88 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 ADAMTS15Q8TE58 950 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 C10orf105Q8TEF2 133 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 GTF3AQ92664 365 aaKnown RBP2.78□□□□□ -1.96
SPG11-225ENST00000561391 SLC35B4Q969S0 331 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 CIDECQ96AQ7 238 aaPredicted RBP2.78□□□□□ -1.96
SPG11-225ENST00000561391 PPP1R14BQ96C90 147 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 INTS12Q96CB8 462 aaKnown RBP2.78□□□□□ -1.96
SPG11-225ENST00000561391 TM4SF19Q96DZ7 209 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 MMABQ96EY8 250 aaPredicted RBP2.78□□□□□ -1.96
SPG11-225ENST00000561391 TXNDC15Q96J42 360 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 IL17FQ96PD4 163 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 DUX5Q96PT3 197 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 FEVQ99581 238 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 PITX2Q99697 317 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 DOK1Q99704 481 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 PELOQ9BRX2 385 aaKnown RBP2.78□□□□□ -1.96
SPG11-225ENST00000561391 WACQ9BTA9 647 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 PINK1Q9BXM7 581 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 SLITRK2Q9H156 845 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 RIBC2Q9H4K1 309 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 NMNAT1Q9HAN9 279 aaPredicted RBP2.78□□□□□ -1.96
SPG11-225ENST00000561391 PALMDQ9NP74 551 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 MKKSQ9NPJ1 570 aaPredicted RBP2.78□□□□□ -1.96
SPG11-225ENST00000561391 ESM1Q9NQ30 184 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 DDX28Q9NUL7 540 aaKnown RBP2.78□□□□□ -1.96
SPG11-225ENST00000561391 GIN1Q9NXP7 522 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 CNOT2Q9NZN8 540 aaKnown RBP2.78□□□□□ -1.96
SPG11-225ENST00000561391 OR6C3Q9NZP0 311 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 SEC14L4Q9UDX3 406 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 C19orf25Q9UFG5 118 aaPredicted RBP2.78□□□□□ -1.96
SPG11-225ENST00000561391 PLAGL1Q9UM63 463 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 CDC14AQ9UNH5 594 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 MRPS33Q9Y291 106 aaKnown RBP2.78□□□□□ -1.96
SPG11-225ENST00000561391 SH3GLB1Q9Y371 365 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 PAM16Q9Y3D7 125 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 PPIAL4AQ9Y536 164 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 ASB4Q9Y574 426 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 U3KQV3 271 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 V9GYQ6 96 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 COL7A1Q02388 2944 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 UBR4Q5T4S7 5183 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 A0A087X0M5 115 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 A0A0A6YYC8 382 aaPredicted RBP2.77□□□□□ -1.97
SPG11-225ENST00000561391 IGKV1-8A0A0C4DH67 115 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 A0A0J9YVX5 310 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 A0A1B0GX30 115 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 PGPEP1LA6NFU8 196 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 FRG2CA6NGY1 282 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 CLDN24A6NM45 220 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 PTGES3LE9PB15 166 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 E9PQ18 207 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 C16orf97H3BN30 126 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 C3orf84H3BNL1 204 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 I3L1I5 382 aaPredicted RBP2.77□□□□□ -1.97
SPG11-225ENST00000561391 hCG_2039718K7EN88 272 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 SLC1A7O00341 560 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 HMGN4O00479 90 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 AP3D1O14617 1153 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms