RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 ALDH16A1Q8IZ83 802 aa9.99□□□□□ -0.81
CARMIL3-204ENST00000561354 KLHL36Q8N4N3 616 aa9.99□□□□□ -0.81
CARMIL3-204ENST00000561354 AKR7LQ8NHP1 331 aa9.99□□□□□ -0.81
CARMIL3-204ENST00000561354 ABHD4Q8TB40 342 aa9.99□□□□□ -0.81
CARMIL3-204ENST00000561354 FNDC8Q8TC99 324 aa9.99□□□□□ -0.81
CARMIL3-204ENST00000561354 SLC26A7Q8TE54 656 aa9.99□□□□□ -0.81
CARMIL3-204ENST00000561354 HDAC2Q92769 488 aaKnown RBP9.99□□□□□ -0.81
CARMIL3-204ENST00000561354 CGREF1Q99674 301 aa9.99□□□□□ -0.81
CARMIL3-204ENST00000561354 OR2H1Q9GZK4 316 aa9.99□□□□□ -0.81
CARMIL3-204ENST00000561354 KAT8Q9H7Z6 458 aaKnown RBP9.99□□□□□ -0.81
CARMIL3-204ENST00000561354 MMP26Q9NRE1 261 aa9.99□□□□□ -0.81
CARMIL3-204ENST00000561354 ZNF69Q9UC07 566 aa9.99□□□□□ -0.81
CARMIL3-204ENST00000561354 NDUFAF1Q9Y375 327 aa9.99□□□□□ -0.81
CARMIL3-204ENST00000561354 AUP1Q9Y679 476 aa9.99□□□□□ -0.81
CARMIL3-204ENST00000561354 IGKV1D-43A0A0B4J1Z2 117 aa9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 DNAJC9-AS1A6NH13 148 aa9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 POM121CA8CG34 1229 aa9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 A8MXK9 166 aa9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 TRAPPC2LH3BP13 241 aa9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 CLDN34H7C241 214 aa9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 NGFP01138 241 aa9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 IGHMP01871 453 aa9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 CST2P09228 141 aa9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 SBK2P0C263 348 aa9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 ZNF12P17014 697 aa9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 TUBG1P23258 451 aa9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 SLC6A9P48067 706 aa9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 CRYBA2P53672 197 aa9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 MTPNP58546 118 aa9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 ERVK-25P63136 954 aa9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 TNFAIP6P98066 277 aaPredicted RBP9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 SLC34A1Q06495 639 aa9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 FMODQ06828 376 aa9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 CDK5R2Q13319 367 aa9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 SELPLGQ14242 412 aa9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 RCN1Q15293 331 aa9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 TAF11Q15544 211 aa9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 SGCAQ16586 387 aa9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 SPRNQ5BIV9 151 aa9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 MTX3Q5HYI7 312 aa9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 KLF17Q5JT82 389 aaPredicted RBP9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 SLC25A47Q6Q0C1 308 aa9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 CCDC80Q76M96 950 aa9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 ZER1Q7Z7L7 766 aa9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 NKAIN4Q8IVV8 208 aa9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 SPICQ8N5J4 248 aa9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 MOSPD2Q8NHP6 518 aa9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 PFN4Q8NHR9 129 aa9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 GEMIN6Q8WXD5 167 aaKnown RBP9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 NSMAFQ92636 917 aa9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 SGTBQ96EQ0 304 aa9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 C1orf147Q96MC9 270 aaPredicted RBP9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 HOPXQ9BPY8 73 aaPredicted RBP9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 ALG12Q9BV10 488 aa9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 POLR2J2Q9GZM3 115 aaKnown RBP9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 POLR2J3Q9H1A7 115 aaKnown RBP9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 TXNIPQ9H3M7 391 aa9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 ELOVL3Q9HB03 270 aa9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 PATZ1Q9HBE1 687 aaKnown RBP9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 MSL2Q9HCI7 577 aa9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 SPAG4Q9NPE6 437 aa9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 TUBG2Q9NRH3 451 aa9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 C20orf141Q9NUB4 165 aa9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 TMEM106BQ9NUM4 274 aa9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 TIMM10BQ9Y5J6 103 aa9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 INSIG2Q9Y5U4 225 aa9.98□□□□□ -0.81
CARMIL3-204ENST00000561354 MRASO14807 208 aa9.97□□□□□ -0.81
CARMIL3-204ENST00000561354 ANGPT2O15123 496 aa9.97□□□□□ -0.81
CARMIL3-204ENST00000561354 OR5F1O95221 314 aa9.97□□□□□ -0.81
CARMIL3-204ENST00000561354 NPPAP01160 153 aa9.97□□□□□ -0.81
CARMIL3-204ENST00000561354 RNASE1P07998 156 aaKnown RBP9.97□□□□□ -0.81
CARMIL3-204ENST00000561354 THRBP10828 461 aa9.97□□□□□ -0.81
CARMIL3-204ENST00000561354 TNFRSF1AP19438 455 aa9.97□□□□□ -0.81
CARMIL3-204ENST00000561354 LAP3P28838 519 aa9.97□□□□□ -0.81
CARMIL3-204ENST00000561354 VHLP40337 213 aa9.97□□□□□ -0.81
CARMIL3-204ENST00000561354 ARHGDIAP52565 204 aa9.97□□□□□ -0.81
CARMIL3-204ENST00000561354 PCBD1P61457 104 aa9.97□□□□□ -0.81
CARMIL3-204ENST00000561354 IL13RA1P78552 427 aa9.97□□□□□ -0.81
CARMIL3-204ENST00000561354 CD47Q08722 323 aa9.97□□□□□ -0.81
CARMIL3-204ENST00000561354 PSG7Q13046 419 aa9.97□□□□□ -0.81
CARMIL3-204ENST00000561354 BAMBIQ13145 260 aa9.97□□□□□ -0.81
CARMIL3-204ENST00000561354 VMACQ2NL98 169 aa9.97□□□□□ -0.81
CARMIL3-204ENST00000561354 ZFP1Q6P2D0 407 aa9.97□□□□□ -0.81
CARMIL3-204ENST00000561354 ARL9Q6T311 187 aa9.97□□□□□ -0.81
CARMIL3-204ENST00000561354 TREML4Q6UXN2 200 aa9.97□□□□□ -0.81
CARMIL3-204ENST00000561354 FOXL2NBQ6ZUU3 175 aa9.97□□□□□ -0.81
CARMIL3-204ENST00000561354 SYT9Q86SS6 491 aa9.97□□□□□ -0.81
CARMIL3-204ENST00000561354 LRRC28Q86X40 367 aaPredicted RBP9.97□□□□□ -0.81
CARMIL3-204ENST00000561354 BCL6BQ8N143 479 aaPredicted RBP9.97□□□□□ -0.81
CARMIL3-204ENST00000561354 ZNF283Q8N7M2 679 aa9.97□□□□□ -0.81
CARMIL3-204ENST00000561354 TMEM255BQ8WV15 326 aa9.97□□□□□ -0.81
CARMIL3-204ENST00000561354 TMEM239Q8WW34 195 aa9.97□□□□□ -0.81
CARMIL3-204ENST00000561354 C4orf45Q96LM5 186 aa9.97□□□□□ -0.81
CARMIL3-204ENST00000561354 SAMD8Q96LT4 415 aa9.97□□□□□ -0.81
CARMIL3-204ENST00000561354 ZNF48Q96MX3 618 aaPredicted RBP9.97□□□□□ -0.81
CARMIL3-204ENST00000561354 RBP7Q96R05 134 aa9.97□□□□□ -0.81
CARMIL3-204ENST00000561354 DCLRE1CQ96SD1 692 aaKnown RBP9.97□□□□□ -0.81
CARMIL3-204ENST00000561354 MRI1Q9BV20 369 aa9.97□□□□□ -0.81
CARMIL3-204ENST00000561354 WNT5BQ9H1J7 359 aa9.97□□□□□ -0.81
CARMIL3-204ENST00000561354 VCX3BQ9H321 246 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms