RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 PIGWQ7Z7B1 504 aa14.66□□□□□ -0.06
CDC42BPB-208ENST00000561271 DEFB107AQ8IZN7 70 aa14.66□□□□□ -0.06
CDC42BPB-208ENST00000561271 KLF14Q8TD94 323 aaPredicted RBP14.66□□□□□ -0.06
CDC42BPB-208ENST00000561271 NDRG4Q9ULP0 352 aaKnown RBP14.66□□□□□ -0.06
CDC42BPB-208ENST00000561271 ZSCAN5BA6NJL1 495 aa14.65□□□□□ -0.06
CDC42BPB-208ENST00000561271 TPD52L2O43399 206 aaKnown RBP14.65□□□□□ -0.06
CDC42BPB-208ENST00000561271 AHCYL1O43865 530 aa14.65□□□□□ -0.06
CDC42BPB-208ENST00000561271 SLC16A7O60669 478 aa14.65□□□□□ -0.06
CDC42BPB-208ENST00000561271 ICMTO60725 284 aa14.65□□□□□ -0.06
CDC42BPB-208ENST00000561271 MPZL1O95297 269 aa14.65□□□□□ -0.06
CDC42BPB-208ENST00000561271 ABHD16AO95870 558 aa14.65□□□□□ -0.06
CDC42BPB-208ENST00000561271 FABP3P05413 133 aa14.65□□□□□ -0.06
CDC42BPB-208ENST00000561271 ZNF81P51508 661 aa14.65□□□□□ -0.06
CDC42BPB-208ENST00000561271 AVPI1Q5T686 147 aa14.65□□□□□ -0.06
CDC42BPB-208ENST00000561271 MBNL2Q5VZF2 373 aaKnown RBP14.65□□□□□ -0.06
CDC42BPB-208ENST00000561271 SMARCD3Q6STE5 483 aa14.65□□□□□ -0.06
CDC42BPB-208ENST00000561271 C16orf89Q6UX73 402 aa14.65□□□□□ -0.06
CDC42BPB-208ENST00000561271 UNQ6126/PRO20091Q6UXV3 157 aa14.65□□□□□ -0.06
CDC42BPB-208ENST00000561271 USP51Q70EK9 711 aa14.65□□□□□ -0.06
CDC42BPB-208ENST00000561271 SYT9Q86SS6 491 aa14.65□□□□□ -0.06
CDC42BPB-208ENST00000561271 ADCK1Q86TW2 530 aa14.65□□□□□ -0.06
CDC42BPB-208ENST00000561271 MCUR1Q96AQ8 359 aa14.65□□□□□ -0.06
CDC42BPB-208ENST00000561271 C4orf45Q96LM5 186 aa14.65□□□□□ -0.06
CDC42BPB-208ENST00000561271 RACGAP1Q9H0H5 632 aa14.65□□□□□ -0.06
CDC42BPB-208ENST00000561271 POFUT1Q9H488 388 aa14.65□□□□□ -0.06
CDC42BPB-208ENST00000561271 SAP30LQ9HAJ7 183 aa14.65□□□□□ -0.06
CDC42BPB-208ENST00000561271 LPAR2Q9HBW0 351 aa14.65□□□□□ -0.06
CDC42BPB-208ENST00000561271 NKIRAS2Q9NYR9 191 aa14.65□□□□□ -0.06
CDC42BPB-208ENST00000561271 TREM2Q9NZC2 230 aa14.65□□□□□ -0.06
CDC42BPB-208ENST00000561271 VSX1Q9NZR4 365 aaPredicted RBP14.65□□□□□ -0.06
CDC42BPB-208ENST00000561271 COA3Q9Y2R0 106 aaPredicted RBP14.65□□□□□ -0.06
CDC42BPB-208ENST00000561271 CACNG2Q9Y698 323 aa14.65□□□□□ -0.06
CDC42BPB-208ENST00000561271 FAM157AC9JC47 383 aa14.64□□□□□ -0.07
CDC42BPB-208ENST00000561271 SGCEO43556 437 aa14.64□□□□□ -0.07
CDC42BPB-208ENST00000561271 SPRY3O43610 288 aa14.64□□□□□ -0.07
CDC42BPB-208ENST00000561271 KHDRBS3O75525 346 aaKnown RBP14.64□□□□□ -0.07
CDC42BPB-208ENST00000561271 GPANK1O95872 356 aa14.64□□□□□ -0.07
CDC42BPB-208ENST00000561271 IGHV1-46P01743 117 aa14.64□□□□□ -0.07
CDC42BPB-208ENST00000561271 RRM2P31350 389 aa14.64□□□□□ -0.07
CDC42BPB-208ENST00000561271 MMP15P51511 669 aa14.64□□□□□ -0.07
CDC42BPB-208ENST00000561271 RPS6KA3P51812 740 aa14.64□□□□□ -0.07
CDC42BPB-208ENST00000561271 DBPQ10586 325 aaPredicted RBP14.64□□□□□ -0.07
CDC42BPB-208ENST00000561271 AQP6Q13520 282 aa14.64□□□□□ -0.07
CDC42BPB-208ENST00000561271 DPY19L2P2Q6ZN68 376 aa14.64□□□□□ -0.07
CDC42BPB-208ENST00000561271 RINLQ6ZS11 566 aa14.64□□□□□ -0.07
CDC42BPB-208ENST00000561271 VASH1Q7L8A9 365 aaPredicted RBP14.64□□□□□ -0.07
CDC42BPB-208ENST00000561271 ZER1Q7Z7L7 766 aa14.64□□□□□ -0.07
CDC42BPB-208ENST00000561271 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.64□□□□□ -0.07
CDC42BPB-208ENST00000561271 GLB1L2Q8IW92 636 aa14.64□□□□□ -0.07
CDC42BPB-208ENST00000561271 SLC7A6Q92536 515 aa14.64□□□□□ -0.07
CDC42BPB-208ENST00000561271 C1orf159Q96HA4 380 aa14.64□□□□□ -0.07
CDC42BPB-208ENST00000561271 TSSK2Q96PF2 358 aa14.64□□□□□ -0.07
CDC42BPB-208ENST00000561271 NUAK2Q9H093 628 aa14.64□□□□□ -0.07
CDC42BPB-208ENST00000561271 OR52D1Q9H346 318 aa14.64□□□□□ -0.07
CDC42BPB-208ENST00000561271 DECR2Q9NUI1 292 aa14.64□□□□□ -0.07
CDC42BPB-208ENST00000561271 PLEK2Q9NYT0 353 aa14.64□□□□□ -0.07
CDC42BPB-208ENST00000561271 ASH2LQ9UBL3 628 aa14.64□□□□□ -0.07
CDC42BPB-208ENST00000561271 IGHV1-69-2A0A0G2JMI3 117 aa14.63□□□□□ -0.07
CDC42BPB-208ENST00000561271 PLSCR5A0PG75 271 aa14.63□□□□□ -0.07
CDC42BPB-208ENST00000561271 H3BSA7 217 aa14.63□□□□□ -0.07
CDC42BPB-208ENST00000561271 DCTN6O00399 190 aa14.63□□□□□ -0.07
CDC42BPB-208ENST00000561271 OR10H3O60404 316 aa14.63□□□□□ -0.07
CDC42BPB-208ENST00000561271 TXNDC12O95881 172 aa14.63□□□□□ -0.07
CDC42BPB-208ENST00000561271 COX5BP10606 129 aa14.63□□□□□ -0.07
CDC42BPB-208ENST00000561271 ATP6V1B2P21281 511 aa14.63□□□□□ -0.07
CDC42BPB-208ENST00000561271 CDKN2AP42771 156 aaKnown RBP14.63□□□□□ -0.07
CDC42BPB-208ENST00000561271 ARHGDIAP52565 204 aa14.63□□□□□ -0.07
CDC42BPB-208ENST00000561271 TMEM33P57088 247 aa14.63□□□□□ -0.07
CDC42BPB-208ENST00000561271 SMIM11AP58511 58 aa14.63□□□□□ -0.07
CDC42BPB-208ENST00000561271 SRSF2Q01130 221 aaKnown RBP14.63□□□□□ -0.07
CDC42BPB-208ENST00000561271 MVKQ03426 396 aa14.63□□□□□ -0.07
CDC42BPB-208ENST00000561271 MOGQ16653 247 aa14.63□□□□□ -0.07
CDC42BPB-208ENST00000561271 MEP1BQ16820 701 aa14.63□□□□□ -0.07
CDC42BPB-208ENST00000561271 CYP2R1Q6VVX0 501 aa14.63□□□□□ -0.07
CDC42BPB-208ENST00000561271 PHC2Q8IXK0 858 aa14.63□□□□□ -0.07
CDC42BPB-208ENST00000561271 ERMAPQ96PL5 475 aaPredicted RBP14.63□□□□□ -0.07
CDC42BPB-208ENST00000561271 ELOVL3Q9HB03 270 aa14.63□□□□□ -0.07
CDC42BPB-208ENST00000561271 NDE1Q9NXR1 346 aa14.63□□□□□ -0.07
CDC42BPB-208ENST00000561271 POLR1DQ9Y2S0 133 aa14.63□□□□□ -0.07
CDC42BPB-208ENST00000561271 TFP02787 698 aa14.62□□□□□ -0.07
CDC42BPB-208ENST00000561271 FPR3P25089 353 aa14.62□□□□□ -0.07
CDC42BPB-208ENST00000561271 SLC6A6P31641 620 aa14.62□□□□□ -0.07
CDC42BPB-208ENST00000561271 CRYBB2P43320 205 aa14.62□□□□□ -0.07
CDC42BPB-208ENST00000561271 CENPAP49450 140 aa14.62□□□□□ -0.07
CDC42BPB-208ENST00000561271 DVL1P1P54792 670 aaPredicted RBP14.62□□□□□ -0.07
CDC42BPB-208ENST00000561271 HNRNPA0Q13151 305 aaKnown RBP14.62□□□□□ -0.07
CDC42BPB-208ENST00000561271 FAM209AQ5JX71 171 aa14.62□□□□□ -0.07
CDC42BPB-208ENST00000561271 LEG1Q6P5S2 330 aa14.62□□□□□ -0.07
CDC42BPB-208ENST00000561271 GLCCI1Q86VQ1 547 aa14.62□□□□□ -0.07
CDC42BPB-208ENST00000561271 ZDHHC21Q8IVQ6 265 aa14.62□□□□□ -0.07
CDC42BPB-208ENST00000561271 WACQ9BTA9 647 aa14.62□□□□□ -0.07
CDC42BPB-208ENST00000561271 FN3KQ9H479 309 aa14.62□□□□□ -0.07
CDC42BPB-208ENST00000561271 MSL2Q9HCI7 577 aa14.62□□□□□ -0.07
CDC42BPB-208ENST00000561271 IL1RAPQ9NPH3 570 aa14.62□□□□□ -0.07
CDC42BPB-208ENST00000561271 TMEFF2Q9UIK5 374 aaPredicted RBP14.62□□□□□ -0.07
CDC42BPB-208ENST00000561271 OR6C6A6NF89 314 aa14.61□□□□□ -0.07
CDC42BPB-208ENST00000561271 B4DSR2 109 aa14.61□□□□□ -0.07
CDC42BPB-208ENST00000561271 CLDN25C9JDP6 229 aa14.61□□□□□ -0.07
CDC42BPB-208ENST00000561271 TIMM8AO60220 97 aaPredicted RBP14.61□□□□□ -0.07
CDC42BPB-208ENST00000561271 GAAP10253 952 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms