RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 SNAP29O95721 258 aa11.94□□□□□ -0.5
TPM1-230ENST00000561266 DBHP09172 617 aa11.94□□□□□ -0.5
TPM1-230ENST00000561266 CD99P14209 185 aa11.94□□□□□ -0.5
TPM1-230ENST00000561266 POU1F1P28069 291 aa11.94□□□□□ -0.5
TPM1-230ENST00000561266 CRABP1P29762 137 aa11.94□□□□□ -0.5
TPM1-230ENST00000561266 GGT2P36268 569 aa11.94□□□□□ -0.5
TPM1-230ENST00000561266 LSM6P62312 80 aaKnown RBP11.94□□□□□ -0.5
TPM1-230ENST00000561266 HIST1H3AP68431 136 aa11.94□□□□□ -0.5
TPM1-230ENST00000561266 PLP2Q04941 152 aa11.94□□□□□ -0.5
TPM1-230ENST00000561266 COX10Q12887 443 aa11.94□□□□□ -0.5
TPM1-230ENST00000561266 TNK1Q13470 666 aa11.94□□□□□ -0.5
TPM1-230ENST00000561266 GINS1Q14691 196 aa11.94□□□□□ -0.5
TPM1-230ENST00000561266 MAD2L1BPQ15013 274 aaPredicted RBP11.94□□□□□ -0.5
TPM1-230ENST00000561266 HIST2H3PS2Q5TEC6 136 aa11.94□□□□□ -0.5
TPM1-230ENST00000561266 RPL13AP3Q6NVV1 102 aa11.94□□□□□ -0.5
TPM1-230ENST00000561266 FAHD1Q6P587 224 aa11.94□□□□□ -0.5
TPM1-230ENST00000561266 RFPL4BQ6ZWI9 263 aa11.94□□□□□ -0.5
TPM1-230ENST00000561266 HIST2H3AQ71DI3 136 aa11.94□□□□□ -0.5
TPM1-230ENST00000561266 SYT9Q86SS6 491 aa11.94□□□□□ -0.5
TPM1-230ENST00000561266 LINC00346Q8IVM7 164 aa11.94□□□□□ -0.5
TPM1-230ENST00000561266 OR5K1Q8NHB7 308 aa11.94□□□□□ -0.5
TPM1-230ENST00000561266 PYDC1Q8WXC3 89 aa11.94□□□□□ -0.5
TPM1-230ENST00000561266 GTF3AQ92664 365 aaKnown RBP11.94□□□□□ -0.5
TPM1-230ENST00000561266 PTP4A1Q93096 173 aa11.94□□□□□ -0.5
TPM1-230ENST00000561266 SEMA6AQ9H2E6 1030 aa11.94□□□□□ -0.5
TPM1-230ENST00000561266 GSX1Q9H4S2 264 aaPredicted RBP11.94□□□□□ -0.5
TPM1-230ENST00000561266 YY1AP1Q9H869 796 aa11.94□□□□□ -0.5
TPM1-230ENST00000561266 CDH20Q9HBT6 801 aa11.94□□□□□ -0.5
TPM1-230ENST00000561266 FBXL3Q9UKT7 428 aa11.94□□□□□ -0.5
TPM1-230ENST00000561266 FKBP7Q9Y680 259 aa11.94□□□□□ -0.5
TPM1-230ENST00000561266 B9A039 149 aa11.93□□□□□ -0.5
TPM1-230ENST00000561266 H7C1Q1 480 aa11.93□□□□□ -0.5
TPM1-230ENST00000561266 SSX4O60224 188 aa11.93□□□□□ -0.5
TPM1-230ENST00000561266 DEAF1O75398 565 aaPredicted RBP11.93□□□□□ -0.5
TPM1-230ENST00000561266 OSMP13725 252 aa11.93□□□□□ -0.5
TPM1-230ENST00000561266 HOXB6P17509 224 aaKnown RBP11.93□□□□□ -0.5
TPM1-230ENST00000561266 ANOS1P23352 680 aa11.93□□□□□ -0.5
TPM1-230ENST00000561266 EPHA2P29317 976 aa11.93□□□□□ -0.5
TPM1-230ENST00000561266 APLNRP35414 380 aa11.93□□□□□ -0.5
TPM1-230ENST00000561266 MPV17P39210 176 aa11.93□□□□□ -0.5
TPM1-230ENST00000561266 UCP2P55851 309 aa11.93□□□□□ -0.5
TPM1-230ENST00000561266 ACTR3P61158 418 aa11.93□□□□□ -0.5
TPM1-230ENST00000561266 CDK5Q00535 292 aa11.93□□□□□ -0.5
TPM1-230ENST00000561266 TEKQ02763 1124 aa11.93□□□□□ -0.5
TPM1-230ENST00000561266 CLEC12BQ2HXU8 276 aa11.93□□□□□ -0.5
TPM1-230ENST00000561266 TBC1D28Q2M2D7 210 aa11.93□□□□□ -0.5
TPM1-230ENST00000561266 ALKBH6Q3KRA9 238 aa11.93□□□□□ -0.5
TPM1-230ENST00000561266 LINC01590Q5TEZ4 76 aa11.93□□□□□ -0.5
TPM1-230ENST00000561266 CFAP77Q6ZQR2 320 aa11.93□□□□□ -0.5
TPM1-230ENST00000561266 ZNF511Q8NB15 262 aa11.93□□□□□ -0.5
TPM1-230ENST00000561266 OR2T33Q8NG76 320 aa11.93□□□□□ -0.5
TPM1-230ENST00000561266 NRBF2Q96F24 287 aa11.93□□□□□ -0.5
TPM1-230ENST00000561266 TRMT61AQ96FX7 289 aaKnown RBP11.93□□□□□ -0.5
TPM1-230ENST00000561266 CMC2Q9NRP2 79 aa11.93□□□□□ -0.5
TPM1-230ENST00000561266 CMAHPQ9Y471 501 aa11.93□□□□□ -0.5
TPM1-230ENST00000561266 OR6C6A6NF89 314 aa11.92□□□□□ -0.5
TPM1-230ENST00000561266 H3BN98 237 aa11.92□□□□□ -0.5
TPM1-230ENST00000561266 SGCEO43556 437 aa11.92□□□□□ -0.5
TPM1-230ENST00000561266 DOK2O60496 412 aa11.92□□□□□ -0.5
TPM1-230ENST00000561266 CIB2O75838 187 aa11.92□□□□□ -0.5
TPM1-230ENST00000561266 ANXA8P13928 327 aa11.92□□□□□ -0.5
TPM1-230ENST00000561266 SPI1P17947 270 aa11.92□□□□□ -0.5
TPM1-230ENST00000561266 FASP25445 335 aa11.92□□□□□ -0.5
TPM1-230ENST00000561266 GRK5P34947 590 aa11.92□□□□□ -0.5
TPM1-230ENST00000561266 GUCA1AP43080 201 aaPredicted RBP11.92□□□□□ -0.5
TPM1-230ENST00000561266 ALDH3B1P43353 468 aa11.92□□□□□ -0.5
TPM1-230ENST00000561266 GDI2P50395 445 aaKnown RBP11.92□□□□□ -0.5
TPM1-230ENST00000561266 PCBD1P61457 104 aa11.92□□□□□ -0.5
TPM1-230ENST00000561266 GALK2Q01415 458 aa11.92□□□□□ -0.5
TPM1-230ENST00000561266 AQP6Q13520 282 aa11.92□□□□□ -0.5
TPM1-230ENST00000561266 RAB35Q15286 201 aa11.92□□□□□ -0.5
TPM1-230ENST00000561266 SPATA46Q5T0L3 261 aa11.92□□□□□ -0.5
TPM1-230ENST00000561266 SLC18B1Q6NT16 456 aa11.92□□□□□ -0.5
TPM1-230ENST00000561266 ZNF525Q8N782 197 aa11.92□□□□□ -0.5
TPM1-230ENST00000561266 ATG16L2Q8NAA4 619 aa11.92□□□□□ -0.5
TPM1-230ENST00000561266 MAPK1IP1LQ8NDC0 245 aa11.92□□□□□ -0.5
TPM1-230ENST00000561266 OR10S1Q8NGN2 331 aa11.92□□□□□ -0.5
TPM1-230ENST00000561266 TEX47Q8TBZ9 253 aa11.92□□□□□ -0.5
TPM1-230ENST00000561266 MAP6Q96JE9 813 aa11.92□□□□□ -0.5
TPM1-230ENST00000561266 PKP2Q99959 881 aa11.92□□□□□ -0.5
TPM1-230ENST00000561266 C1orf198Q9H425 327 aa11.92□□□□□ -0.5
TPM1-230ENST00000561266 WDR76Q9H967 626 aa11.92□□□□□ -0.5
TPM1-230ENST00000561266 PNRC2Q9NPJ4 139 aaKnown RBP11.92□□□□□ -0.5
TPM1-230ENST00000561266 TMEFF2Q9UIK5 374 aaPredicted RBP11.92□□□□□ -0.5
TPM1-230ENST00000561266 MTORP42345 2549 aa11.92□□□□□ -0.5
TPM1-230ENST00000561266 CSPG4Q6UVK1 2322 aa11.92□□□□□ -0.5
TPM1-230ENST00000561266 IGHV4-30-2A0A087WSY4 118 aa11.91□□□□□ -0.5
TPM1-230ENST00000561266 PTHP01270 115 aa11.91□□□□□ -0.5
TPM1-230ENST00000561266 LCKP06239 509 aa11.91□□□□□ -0.5
TPM1-230ENST00000561266 ADRA2AP08913 450 aa11.91□□□□□ -0.5
TPM1-230ENST00000561266 ZNF250P15622 560 aa11.91□□□□□ -0.5
TPM1-230ENST00000561266 PCSK6P29122 969 aa11.91□□□□□ -0.5
TPM1-230ENST00000561266 HTR5AP47898 357 aa11.91□□□□□ -0.5
TPM1-230ENST00000561266 SLC25A1P53007 311 aa11.91□□□□□ -0.5
TPM1-230ENST00000561266 SNRPD2P62316 118 aaKnown RBP11.91□□□□□ -0.5
TPM1-230ENST00000561266 RGS7BPQ6MZT1 257 aaPredicted RBP11.91□□□□□ -0.5
TPM1-230ENST00000561266 TMEM154Q6P9G4 183 aa11.91□□□□□ -0.5
TPM1-230ENST00000561266 DNM1P34Q6PK57 102 aa11.91□□□□□ -0.5
TPM1-230ENST00000561266 NAA40Q86UY6 237 aa11.91□□□□□ -0.5
TPM1-230ENST00000561266 ICA1LQ8NDH6 482 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms