RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 KCNS2Q9ULS6 477 aa13.65□□□□□ -0.22
LMX1B-204ENST00000561065 ADAM18Q9Y3Q7 739 aa13.65□□□□□ -0.22
LMX1B-204ENST00000561065 TANC2Q9HCD6 1990 aa13.65□□□□□ -0.22
LMX1B-204ENST00000561065 LOC100509620A0A075B734 347 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 ARPC3O15145 178 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 RP2O75695 350 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 DNAJC8O75937 253 aaPredicted RBP13.64□□□□□ -0.23
LMX1B-204ENST00000561065 TXNDC12O95881 172 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 CCNOP22674 350 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 TUBG1P23258 451 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 COL8A2P25067 703 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 STOMP27105 288 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 LAP3P28838 519 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 MAGEA2P43356 314 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 MAGEB1P43366 347 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 ARHGDIAP52565 204 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 UCP2P55851 309 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 CCNIQ14094 377 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 FAM120AOSQ5T036 256 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 FAM122BQ7Z309 247 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 PHC2Q8IXK0 858 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 AKR7LQ8NHP1 331 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 CCDC124Q96CT7 223 aaKnown RBP13.64□□□□□ -0.23
LMX1B-204ENST00000561065 POM121L2Q96KW2 1035 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 BEX2Q9BXY8 128 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 SHARPINQ9H0F6 387 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 OR52D1Q9H346 318 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 RERGLQ9H628 205 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 TUBG2Q9NRH3 451 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 SLCO1C1Q9NYB5 712 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 LPAR3Q9UBY5 353 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 NDRG4Q9ULP0 352 aaKnown RBP13.64□□□□□ -0.23
LMX1B-204ENST00000561065 SAMHD1Q9Y3Z3 626 aaKnown RBP13.64□□□□□ -0.23
LMX1B-204ENST00000561065 TEX13CA0A0J9YWL9 993 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 SOCS2O14508 198 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 WNT9BO14905 357 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 SLC16A7O60669 478 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 UBOX5O94941 541 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 TGFAP01135 160 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 SCG5P05408 212 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 LCKP06239 509 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 ATP6V1B2P21281 511 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 GSSP48637 474 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 CHN2P52757 468 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 KLF3P57682 345 aaPredicted RBP13.64□□□□□ -0.23
LMX1B-204ENST00000561065 LSM6P62312 80 aaKnown RBP13.64□□□□□ -0.23
LMX1B-204ENST00000561065 PSG4Q00888 419 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 GLO1Q04760 184 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 COX10Q12887 443 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 ENDOGQ14249 297 aaKnown RBP13.64□□□□□ -0.23
LMX1B-204ENST00000561065 SLC36A3Q495N2 470 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 MESTQ5EB52 335 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 RFPL4BQ6ZWI9 263 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 SNX33Q8WV41 574 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 IPCEF1Q8WWN9 437 aaPredicted RBP13.64□□□□□ -0.23
LMX1B-204ENST00000561065 COG8Q96MW5 612 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 WNT5BQ9H1J7 359 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 MMADHCQ9H3L0 296 aaPredicted RBP13.64□□□□□ -0.23
LMX1B-204ENST00000561065 POLE4Q9NR33 117 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 VSX1Q9NZR4 365 aaPredicted RBP13.64□□□□□ -0.23
LMX1B-204ENST00000561065 TAAR3PQ9P1P4 343 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 BAIAP2Q9UQB8 552 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 LYVE1Q9Y5Y7 322 aa13.64□□□□□ -0.23
LMX1B-204ENST00000561065 TCRBV5S2A0A599 114 aa13.63□□□□□ -0.23
LMX1B-204ENST00000561065 PHF1O43189 567 aaPredicted RBP13.63□□□□□ -0.23
LMX1B-204ENST00000561065 CST1P01037 141 aa13.63□□□□□ -0.23
LMX1B-204ENST00000561065 IFNA2P01563 188 aa13.63□□□□□ -0.23
LMX1B-204ENST00000561065 COX5BP10606 129 aa13.63□□□□□ -0.23
LMX1B-204ENST00000561065 GCH1P30793 250 aa13.63□□□□□ -0.23
LMX1B-204ENST00000561065 MPV17P39210 176 aa13.63□□□□□ -0.23
LMX1B-204ENST00000561065 CENPAP49450 140 aa13.63□□□□□ -0.23
LMX1B-204ENST00000561065 CDH15P55291 814 aa13.63□□□□□ -0.23
LMX1B-204ENST00000561065 FXYD6P3P58550 94 aa13.63□□□□□ -0.23
LMX1B-204ENST00000561065 MS4A2Q01362 244 aa13.63□□□□□ -0.23
LMX1B-204ENST00000561065 FLOT2Q14254 428 aa13.63□□□□□ -0.23
LMX1B-204ENST00000561065 NKPD1Q17RQ9 610 aa13.63□□□□□ -0.23
LMX1B-204ENST00000561065 MICAQ29983 383 aa13.63□□□□□ -0.23
LMX1B-204ENST00000561065 ZNF718Q3SXZ3 478 aa13.63□□□□□ -0.23
LMX1B-204ENST00000561065 ICA1LQ8NDH6 482 aa13.63□□□□□ -0.23
LMX1B-204ENST00000561065 SYNPRQ8TBG9 265 aa13.63□□□□□ -0.23
LMX1B-204ENST00000561065 C1orf159Q96HA4 380 aa13.63□□□□□ -0.23
LMX1B-204ENST00000561065 CHID1Q9BWS9 393 aa13.63□□□□□ -0.23
LMX1B-204ENST00000561065 CDADC1Q9BWV3 514 aa13.63□□□□□ -0.23
LMX1B-204ENST00000561065 OR2H1Q9GZK4 316 aa13.63□□□□□ -0.23
LMX1B-204ENST00000561065 RACGAP1Q9H0H5 632 aa13.63□□□□□ -0.23
LMX1B-204ENST00000561065 SYT4Q9H2B2 425 aa13.63□□□□□ -0.23
LMX1B-204ENST00000561065 NARFLQ9H6Q4 476 aa13.63□□□□□ -0.23
LMX1B-204ENST00000561065 ZNF556Q9HAH1 456 aa13.63□□□□□ -0.23
LMX1B-204ENST00000561065 ZNF275Q9NSD4 429 aaPredicted RBP13.63□□□□□ -0.23
LMX1B-204ENST00000561065 IL20RAQ9UHF4 553 aa13.63□□□□□ -0.23
LMX1B-204ENST00000561065 DHRS12A0PJE2 317 aa13.62□□□□□ -0.23
LMX1B-204ENST00000561065 C5orf49A4QMS7 147 aa13.62□□□□□ -0.23
LMX1B-204ENST00000561065 RNF212BA8MTL3 300 aa13.62□□□□□ -0.23
LMX1B-204ENST00000561065 C17orf100A8MU93 164 aa13.62□□□□□ -0.23
LMX1B-204ENST00000561065 ACHEP22303 614 aa13.62□□□□□ -0.23
LMX1B-204ENST00000561065 LIPAP38571 399 aa13.62□□□□□ -0.23
LMX1B-204ENST00000561065 SRSF2Q01130 221 aaKnown RBP13.62□□□□□ -0.23
LMX1B-204ENST00000561065 AQP6Q13520 282 aa13.62□□□□□ -0.23
LMX1B-204ENST00000561065 CR1LQ2VPA4 569 aa13.62□□□□□ -0.23
LMX1B-204ENST00000561065 SPATA46Q5T0L3 261 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms