RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 MEDAGQ5VYS4 303 aa6.13□□□□□ -1.43
CTDSPL2-210ENST00000560834 OR7E24Q6IFN5 339 aa6.13□□□□□ -1.43
CTDSPL2-210ENST00000560834 CFAP77Q6ZQR2 320 aa6.13□□□□□ -1.43
CTDSPL2-210ENST00000560834 MEPCEQ7L2J0 689 aaKnown RBP6.13□□□□□ -1.43
CTDSPL2-210ENST00000560834 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.13□□□□□ -1.43
CTDSPL2-210ENST00000560834 MDP1Q86V88 176 aa6.13□□□□□ -1.43
CTDSPL2-210ENST00000560834 ERI1Q8IV48 349 aaKnown RBP6.13□□□□□ -1.43
CTDSPL2-210ENST00000560834 ZNF584Q8IVC4 421 aa6.13□□□□□ -1.43
CTDSPL2-210ENST00000560834 LINC00346Q8IVM7 164 aa6.13□□□□□ -1.43
CTDSPL2-210ENST00000560834 LRRC18Q8N456 261 aa6.13□□□□□ -1.43
CTDSPL2-210ENST00000560834 SVOPQ8N4V2 548 aa6.13□□□□□ -1.43
CTDSPL2-210ENST00000560834 RFLNBQ8N5W9 214 aa6.13□□□□□ -1.43
CTDSPL2-210ENST00000560834 OR52N5Q8NH56 324 aa6.13□□□□□ -1.43
CTDSPL2-210ENST00000560834 GATAD2BQ8WXI9 593 aa6.13□□□□□ -1.43
CTDSPL2-210ENST00000560834 LRRC46Q96FV0 321 aa6.13□□□□□ -1.43
CTDSPL2-210ENST00000560834 ZNF75AQ96N20 296 aa6.13□□□□□ -1.43
CTDSPL2-210ENST00000560834 INTS14Q96SY0 518 aa6.13□□□□□ -1.43
CTDSPL2-210ENST00000560834 TEAD3Q99594 435 aa6.13□□□□□ -1.43
CTDSPL2-210ENST00000560834 RHNO1Q9BSD3 238 aa6.13□□□□□ -1.43
CTDSPL2-210ENST00000560834 HDHD5Q9BXW7 423 aa6.13□□□□□ -1.43
CTDSPL2-210ENST00000560834 WDR76Q9H967 626 aa6.13□□□□□ -1.43
CTDSPL2-210ENST00000560834 SEC61A2Q9H9S3 476 aa6.13□□□□□ -1.43
CTDSPL2-210ENST00000560834 SIAEQ9HAT2 523 aa6.13□□□□□ -1.43
CTDSPL2-210ENST00000560834 OBP2BQ9NPH6 170 aa6.13□□□□□ -1.43
CTDSPL2-210ENST00000560834 B3GNT2Q9NY97 397 aa6.13□□□□□ -1.43
CTDSPL2-210ENST00000560834 HAO2Q9NYQ3 351 aa6.13□□□□□ -1.43
CTDSPL2-210ENST00000560834 KLHDC2Q9Y2U9 406 aa6.13□□□□□ -1.43
CTDSPL2-210ENST00000560834 AMDHD2Q9Y303 409 aa6.13□□□□□ -1.43
CTDSPL2-210ENST00000560834 ALPK2Q86TB3 2170 aa6.13□□□□□ -1.43
CTDSPL2-210ENST00000560834 DIDO1Q9BTC0 2240 aaKnown RBP6.13□□□□□ -1.43
CTDSPL2-210ENST00000560834 ELOA3CA0A087WX78 387 aaPredicted RBP6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 A1L4Q6 167 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 FAM221AA4D161 298 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 PRR32B1ATL7 298 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 PRSS44E7EML9 344 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 J3QRE1 110 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 DENRO43583 198 aaKnown RBP6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 UBL3O95164 117 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 APOL3O95236 402 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 FARS2O95363 451 aaKnown RBP6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 IGKV3-15P01624 115 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 IGLV1-44P01699 117 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 HLA-DQA2P01906 255 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 CELA3BP08861 270 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 ADRA2AP08913 450 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 SPARCP09486 303 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 SBK2P0C263 348 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 PPP3CBP16298 524 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 ZNF14P17017 642 aaPredicted RBP6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 HOXC12P31275 282 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 FMO3P31513 532 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 SLC15A1P46059 708 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 CENPAP49450 140 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 ENTPD1P49961 510 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 BLVRAP53004 296 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 RPS7P62081 194 aaKnown RBP6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 HIST1H3AP68431 136 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 CDK5R2Q13319 367 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 TMED1Q13445 227 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 PPA1Q15181 289 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 TEX30Q5JUR7 227 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 HIST2H3PS2Q5TEC6 136 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 SLC18B1Q6NT16 456 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 CORO6Q6QEF8 472 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 HIST2H3AQ71DI3 136 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 SHFQ7M4L6 423 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 SLC16A14Q7RTX9 510 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 THAP5Q7Z6K1 395 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 P2RY8Q86VZ1 359 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 CDC20BQ86Y33 519 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 KRTAP19-1Q8IUB9 90 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 DMRTC2Q8IXT2 367 aaPredicted RBP6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 OR10H5Q8NGA6 315 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 OR51G2Q8NGK0 314 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 OR10S1Q8NGN2 331 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 OR6N2Q8NGY6 317 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 ST7LQ8TDW4 575 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 SMAP2Q8WU79 429 aaPredicted RBP6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 MAP6Q96JE9 813 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 CNBD2Q96M20 576 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 WFIKKN1Q96NZ8 548 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 PCNX1Q96RV3 2341 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 AMELYQ99218 206 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 CNN2Q99439 309 aaKnown RBP6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 WNT5BQ9H1J7 359 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 PNRC2Q9NPJ4 139 aaKnown RBP6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 CLN6Q9NWW5 311 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 UBAP1Q9NZ09 502 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 CRNNQ9UBG3 495 aaPredicted RBP6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 ASH2LQ9UBL3 628 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 WARS2Q9UGM6 360 aaKnown RBP6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 CYB5R1Q9UHQ9 305 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 KCNG2Q9UJ96 466 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 GDF2Q9UK05 429 aaPredicted RBP6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 COPS3Q9UNS2 423 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 POLR1DQ9Y2S0 133 aa6.12□□□□□ -1.43
CTDSPL2-210ENST00000560834 RAI1Q7Z5J4 1906 aaPredicted RBP6.11□□□□□ -1.43
CTDSPL2-210ENST00000560834 GCN1Q92616 2671 aaKnown RBP6.11□□□□□ -1.43
CTDSPL2-210ENST00000560834 MYO18BQ8IUG5 2567 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 153.9 ms