RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 UCP2P55851 309 aa8.33□□□□□ -1.08
TPM1-225ENST00000560679 PAX8Q06710 450 aa8.33□□□□□ -1.08
TPM1-225ENST00000560679 DEFB112Q30KQ8 113 aa8.33□□□□□ -1.08
TPM1-225ENST00000560679 BEAN1Q3B7T3 259 aa8.33□□□□□ -1.08
TPM1-225ENST00000560679 COMTD1Q86VU5 262 aa8.33□□□□□ -1.08
TPM1-225ENST00000560679 OR6N1Q8NGY5 312 aa8.33□□□□□ -1.08
TPM1-225ENST00000560679 C11orf40Q8WZ69 217 aa8.33□□□□□ -1.08
TPM1-225ENST00000560679 SLC38A4Q969I6 547 aa8.33□□□□□ -1.08
TPM1-225ENST00000560679 MRI1Q9BV20 369 aa8.33□□□□□ -1.08
TPM1-225ENST00000560679 FAM192AQ9GZU8 254 aa8.33□□□□□ -1.08
TPM1-225ENST00000560679 PRDM13Q9H4Q3 707 aa8.33□□□□□ -1.08
TPM1-225ENST00000560679 MAGIXQ9H6Y5 334 aa8.33□□□□□ -1.08
TPM1-225ENST00000560679 PATZ1Q9HBE1 687 aaKnown RBP8.33□□□□□ -1.08
TPM1-225ENST00000560679 CDH20Q9HBT6 801 aa8.33□□□□□ -1.08
TPM1-225ENST00000560679 P2RX2Q9UBL9 471 aa8.33□□□□□ -1.08
TPM1-225ENST00000560679 OAZ3Q9UMX2 235 aa8.33□□□□□ -1.08
TPM1-225ENST00000560679 NPTNQ9Y639 398 aa8.33□□□□□ -1.08
TPM1-225ENST00000560679 V9GYQ6 96 aa8.33□□□□□ -1.08
TPM1-225ENST00000560679 COL7A1Q02388 2944 aa8.32□□□□□ -1.08
TPM1-225ENST00000560679 TRAV36DV7A0A075B6V5 113 aa8.32□□□□□ -1.08
TPM1-225ENST00000560679 A0A1B0GWA3 101 aa8.32□□□□□ -1.08
TPM1-225ENST00000560679 CLPSL1A2RUU4 121 aa8.32□□□□□ -1.08
TPM1-225ENST00000560679 SRRM5B3KS81 715 aa8.32□□□□□ -1.08
TPM1-225ENST00000560679 LRRN3E7EW58 273 aa8.32□□□□□ -1.08
TPM1-225ENST00000560679 OR2T1O43869 369 aa8.32□□□□□ -1.08
TPM1-225ENST00000560679 PRB2P02812 416 aaPredicted RBP8.32□□□□□ -1.08
TPM1-225ENST00000560679 BGLAPP02818 100 aa8.32□□□□□ -1.08
TPM1-225ENST00000560679 ADH4P08319 380 aa8.32□□□□□ -1.08
TPM1-225ENST00000560679 WNT5AP41221 380 aa8.32□□□□□ -1.08
TPM1-225ENST00000560679 CSNK1A1P48729 337 aa8.32□□□□□ -1.08
TPM1-225ENST00000560679 SLC3A1Q07837 685 aa8.32□□□□□ -1.08
TPM1-225ENST00000560679 PUDPQ08623 228 aa8.32□□□□□ -1.08
TPM1-225ENST00000560679 ZNF362Q5T0B9 420 aaPredicted RBP8.32□□□□□ -1.08
TPM1-225ENST00000560679 SPATA46Q5T0L3 261 aa8.32□□□□□ -1.08
TPM1-225ENST00000560679 ERICH5Q6P6B1 374 aa8.32□□□□□ -1.08
TPM1-225ENST00000560679 FIP1L1Q6UN15 594 aaKnown RBP8.32□□□□□ -1.08
TPM1-225ENST00000560679 PIWIL3Q7Z3Z3 882 aaKnown RBP8.32□□□□□ -1.08
TPM1-225ENST00000560679 ZNF101Q8IZC7 436 aa8.32□□□□□ -1.08
TPM1-225ENST00000560679 VPS37AQ8NEZ2 397 aa8.32□□□□□ -1.08
TPM1-225ENST00000560679 OR52E2Q8NGJ4 325 aa8.32□□□□□ -1.08
TPM1-225ENST00000560679 SLC38A5Q8WUX1 472 aa8.32□□□□□ -1.08
TPM1-225ENST00000560679 TMEM54Q969K7 222 aa8.32□□□□□ -1.08
TPM1-225ENST00000560679 DACT3Q96B18 629 aaPredicted RBP8.32□□□□□ -1.08
TPM1-225ENST00000560679 UPRTQ96BW1 309 aa8.32□□□□□ -1.08
TPM1-225ENST00000560679 SLC47A1Q96FL8 570 aa8.32□□□□□ -1.08
TPM1-225ENST00000560679 TMEM19Q96HH6 336 aa8.32□□□□□ -1.08
TPM1-225ENST00000560679 MOGAT1Q96PD6 335 aa8.32□□□□□ -1.08
TPM1-225ENST00000560679 PANX1Q96RD7 426 aa8.32□□□□□ -1.08
TPM1-225ENST00000560679 DIRC2Q96SL1 478 aa8.32□□□□□ -1.08
TPM1-225ENST00000560679 MRPS26Q9BYN8 205 aaKnown RBP8.32□□□□□ -1.08
TPM1-225ENST00000560679 ANKRD60Q9BZ19 345 aa8.32□□□□□ -1.08
TPM1-225ENST00000560679 CHIAQ9BZP6 476 aa8.32□□□□□ -1.08
TPM1-225ENST00000560679 BCL2L14Q9BZR8 327 aa8.32□□□□□ -1.08
TPM1-225ENST00000560679 MARCH7Q9H992 704 aa8.32□□□□□ -1.08
TPM1-225ENST00000560679 C12orf10Q9HB07 376 aa8.32□□□□□ -1.08
TPM1-225ENST00000560679 DCAF13Q9NV06 445 aaKnown RBP8.32□□□□□ -1.08
TPM1-225ENST00000560679 TMEM38BQ9NVV0 291 aa8.32□□□□□ -1.08
TPM1-225ENST00000560679 DNAJB9Q9UBS3 223 aa8.32□□□□□ -1.08
TPM1-225ENST00000560679 CORO2BQ9UQ03 480 aa8.32□□□□□ -1.08
TPM1-225ENST00000560679 GMEB1Q9Y692 573 aa8.32□□□□□ -1.08
TPM1-225ENST00000560679 G3V4G9 280 aa8.31□□□□□ -1.08
TPM1-225ENST00000560679 CLIC1O00299 241 aa8.31□□□□□ -1.08
TPM1-225ENST00000560679 DLGAP1O14490 977 aa8.31□□□□□ -1.08
TPM1-225ENST00000560679 EI24O14681 340 aa8.31□□□□□ -1.08
TPM1-225ENST00000560679 SERPINI2O75830 405 aa8.31□□□□□ -1.08
TPM1-225ENST00000560679 MT-ND1P03886 318 aa8.31□□□□□ -1.08
TPM1-225ENST00000560679 MT-ND5P03915 603 aa8.31□□□□□ -1.08
TPM1-225ENST00000560679 CD55P08174 381 aa8.31□□□□□ -1.08
TPM1-225ENST00000560679 MMP7P09237 267 aaPredicted RBP8.31□□□□□ -1.08
TPM1-225ENST00000560679 SBK2P0C263 348 aa8.31□□□□□ -1.08
TPM1-225ENST00000560679 PPIAL4GP0DN37 164 aa8.31□□□□□ -1.08
TPM1-225ENST00000560679 GPX2P18283 190 aa8.31□□□□□ -1.08
TPM1-225ENST00000560679 MYF6P23409 242 aa8.31□□□□□ -1.08
TPM1-225ENST00000560679 ANXA11P50995 505 aaKnown RBP8.31□□□□□ -1.08
TPM1-225ENST00000560679 CRISP3P54108 245 aa8.31□□□□□ -1.08
TPM1-225ENST00000560679 BIDP55957 195 aa8.31□□□□□ -1.08
TPM1-225ENST00000560679 GK3PQ14409 553 aa8.31□□□□□ -1.08
TPM1-225ENST00000560679 LARS2Q15031 903 aaKnown RBP8.31□□□□□ -1.08
TPM1-225ENST00000560679 ZMYND11Q15326 602 aa8.31□□□□□ -1.08
TPM1-225ENST00000560679 TBC1D28Q2M2D7 210 aa8.31□□□□□ -1.08
TPM1-225ENST00000560679 VMACQ2NL98 169 aa8.31□□□□□ -1.08
TPM1-225ENST00000560679 TMEM155Q4W5P6 130 aa8.31□□□□□ -1.08
TPM1-225ENST00000560679 KPRPQ5T749 579 aaPredicted RBP8.31□□□□□ -1.08
TPM1-225ENST00000560679 LRFN4Q6PJG9 635 aa8.31□□□□□ -1.08
TPM1-225ENST00000560679 C5orf46Q6UWT4 87 aa8.31□□□□□ -1.08
TPM1-225ENST00000560679 BRD3OSQ6XYD6 125 aa8.31□□□□□ -1.08
TPM1-225ENST00000560679 ZNF621Q6ZSS3 439 aa8.31□□□□□ -1.08
TPM1-225ENST00000560679 RFPL4BQ6ZWI9 263 aa8.31□□□□□ -1.08
TPM1-225ENST00000560679 C10orf111Q8N326 155 aa8.31□□□□□ -1.08
TPM1-225ENST00000560679 SPICQ8N5J4 248 aa8.31□□□□□ -1.08
TPM1-225ENST00000560679 TRIML2Q8N7C3 387 aa8.31□□□□□ -1.08
TPM1-225ENST00000560679 FAM86B1Q8N7N1 296 aa8.31□□□□□ -1.08
TPM1-225ENST00000560679 SCAIQ8N9R8 606 aa8.31□□□□□ -1.08
TPM1-225ENST00000560679 OR4K5Q8NGD3 323 aa8.31□□□□□ -1.08
TPM1-225ENST00000560679 OR1J1Q8NGS3 322 aa8.31□□□□□ -1.08
TPM1-225ENST00000560679 FAM110DQ8TAY7 271 aaPredicted RBP8.31□□□□□ -1.08
TPM1-225ENST00000560679 TFAP2CQ92754 450 aa8.31□□□□□ -1.08
TPM1-225ENST00000560679 MARS2Q96GW9 593 aaKnown RBP8.31□□□□□ -1.08
TPM1-225ENST00000560679 SIGLEC11Q96RL6 698 aa8.31□□□□□ -1.08
TPM1-225ENST00000560679 DCLRE1CQ96SD1 692 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 233.3 ms