RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 PRKACAP17612 351 aa12.28□□□□□ -0.44
TRAF3-208ENST00000560371 F2RP25116 425 aa12.28□□□□□ -0.44
TRAF3-208ENST00000560371 GSK3AP49840 483 aa12.28□□□□□ -0.44
TRAF3-208ENST00000560371 RBP2P50120 134 aa12.28□□□□□ -0.44
TRAF3-208ENST00000560371 ZNF674Q2M3X9 581 aa12.28□□□□□ -0.44
TRAF3-208ENST00000560371 RBMS3Q6XE24 437 aaKnown RBP12.28□□□□□ -0.44
TRAF3-208ENST00000560371 CYP4V2Q6ZWL3 525 aaPredicted RBP12.28□□□□□ -0.44
TRAF3-208ENST00000560371 DOK3Q7L591 496 aa12.28□□□□□ -0.44
TRAF3-208ENST00000560371 CISD2Q8N5K1 135 aaKnown RBP12.28□□□□□ -0.44
TRAF3-208ENST00000560371 OR10X1Q8NGY0 326 aa12.28□□□□□ -0.44
TRAF3-208ENST00000560371 OSGIN1Q9UJX0 560 aa12.28□□□□□ -0.44
TRAF3-208ENST00000560371 TRAV17A0A0B4J275 112 aa12.28□□□□□ -0.44
TRAF3-208ENST00000560371 M0R135 149 aa12.28□□□□□ -0.44
TRAF3-208ENST00000560371 CTDSP2O14595 271 aa12.28□□□□□ -0.44
TRAF3-208ENST00000560371 CLDN15P56746 228 aa12.28□□□□□ -0.44
TRAF3-208ENST00000560371 ACSM1Q08AH1 577 aa12.28□□□□□ -0.44
TRAF3-208ENST00000560371 OR2A2Q6IF42 318 aa12.28□□□□□ -0.44
TRAF3-208ENST00000560371 LILRA6Q6PI73 481 aa12.28□□□□□ -0.44
TRAF3-208ENST00000560371 ZNF799Q96GE5 643 aa12.28□□□□□ -0.44
TRAF3-208ENST00000560371 CNTNAP3BQ96NU0 1288 aa12.28□□□□□ -0.44
TRAF3-208ENST00000560371 PRKNO60260 465 aaPredicted RBP12.28□□□□□ -0.44
TRAF3-208ENST00000560371 NAGAP17050 411 aa12.28□□□□□ -0.44
TRAF3-208ENST00000560371 NKX2-5P52952 324 aaPredicted RBP12.28□□□□□ -0.44
TRAF3-208ENST00000560371 ZNF718Q3SXZ3 478 aa12.28□□□□□ -0.44
TRAF3-208ENST00000560371 OR6M1Q8NGM8 313 aa12.28□□□□□ -0.44
TRAF3-208ENST00000560371 GIMAP1Q8WWP7 306 aa12.28□□□□□ -0.44
TRAF3-208ENST00000560371 OXGR1Q96P68 337 aa12.28□□□□□ -0.44
TRAF3-208ENST00000560371 GPR78Q96P69 363 aa12.28□□□□□ -0.44
TRAF3-208ENST00000560371 HEYLQ9NQ87 328 aaPredicted RBP12.28□□□□□ -0.44
TRAF3-208ENST00000560371 RAB6AP20340 208 aa12.28□□□□□ -0.44
TRAF3-208ENST00000560371 NDUFA6P56556 154 aa12.28□□□□□ -0.44
TRAF3-208ENST00000560371 TATDN3Q17R31 274 aa12.28□□□□□ -0.44
TRAF3-208ENST00000560371 SYT14P1Q58G82 188 aa12.28□□□□□ -0.44
TRAF3-208ENST00000560371 BCDIN3DQ7Z5W3 292 aaKnown RBP12.28□□□□□ -0.44
TRAF3-208ENST00000560371 DNAJC5GQ8N7S2 189 aa12.28□□□□□ -0.44
TRAF3-208ENST00000560371 KISS1RQ969F8 398 aaPredicted RBP12.28□□□□□ -0.44
TRAF3-208ENST00000560371 PHF1O43189 567 aaPredicted RBP12.28□□□□□ -0.44
TRAF3-208ENST00000560371 ZNF728P0DKX0 622 aa12.28□□□□□ -0.44
TRAF3-208ENST00000560371 HIST1H1CP16403 213 aaKnown RBP12.28□□□□□ -0.44
TRAF3-208ENST00000560371 RAB13P51153 203 aa12.28□□□□□ -0.44
TRAF3-208ENST00000560371 ACKR1Q16570 336 aa12.28□□□□□ -0.44
TRAF3-208ENST00000560371 ADGRE4PQ86SQ3 457 aa12.28□□□□□ -0.44
TRAF3-208ENST00000560371 NOXA1Q86UR1 476 aa12.28□□□□□ -0.44
TRAF3-208ENST00000560371 PELI3Q8N2H9 469 aa12.28□□□□□ -0.44
TRAF3-208ENST00000560371 PARP16Q8N5Y8 322 aa12.28□□□□□ -0.44
TRAF3-208ENST00000560371 DEFB108BQ8NET1 73 aa12.28□□□□□ -0.44
TRAF3-208ENST00000560371 TTC9Q92623 222 aa12.28□□□□□ -0.44
TRAF3-208ENST00000560371 EXO1Q9UQ84 846 aaKnown RBP12.28□□□□□ -0.44
TRAF3-208ENST00000560371 MEIOCA2RUB1 952 aa12.28□□□□□ -0.44
TRAF3-208ENST00000560371 FAM157BP0CG42 384 aa12.28□□□□□ -0.44
TRAF3-208ENST00000560371 HTR4Q13639 388 aa12.28□□□□□ -0.44
TRAF3-208ENST00000560371 OR5M9Q8NGP3 310 aa12.28□□□□□ -0.44
TRAF3-208ENST00000560371 ZNF346Q9UL40 294 aaKnown RBP12.28□□□□□ -0.44
TRAF3-208ENST00000560371 IGHV3-64DA0A0J9YX35 117 aa12.27□□□□□ -0.44
TRAF3-208ENST00000560371 SH2D1BO14796 132 aa12.27□□□□□ -0.44
TRAF3-208ENST00000560371 CTGFP29279 349 aa12.27□□□□□ -0.44
TRAF3-208ENST00000560371 NLRC3Q7RTR2 1065 aa12.27□□□□□ -0.44
TRAF3-208ENST00000560371 BATF2Q8N1L9 274 aa12.27□□□□□ -0.44
TRAF3-208ENST00000560371 OLIG1Q8TAK6 271 aa12.27□□□□□ -0.44
TRAF3-208ENST00000560371 C1QTNF3Q9BXJ4 246 aa12.27□□□□□ -0.44
TRAF3-208ENST00000560371 QPCTLQ9NXS2 382 aa12.27□□□□□ -0.44
TRAF3-208ENST00000560371 TAS2R16Q9NYV7 291 aa12.27□□□□□ -0.44
TRAF3-208ENST00000560371 DIMT1Q9UNQ2 313 aaKnown RBP12.27□□□□□ -0.44
TRAF3-208ENST00000560371 FAM96BQ9Y3D0 163 aa12.27□□□□□ -0.44
TRAF3-208ENST00000560371 KLK4Q9Y5K2 254 aa12.27□□□□□ -0.44
TRAF3-208ENST00000560371 TRGV5A0A0B4J1U4 118 aa12.27□□□□□ -0.44
TRAF3-208ENST00000560371 BSGP35613 385 aa12.27□□□□□ -0.44
TRAF3-208ENST00000560371 GLIPR1L1Q6UWM5 242 aa12.27□□□□□ -0.44
TRAF3-208ENST00000560371 DLEU7Q6UYE1 221 aa12.27□□□□□ -0.44
TRAF3-208ENST00000560371 TEAD3Q99594 435 aa12.27□□□□□ -0.44
TRAF3-208ENST00000560371 ZNF195O14628 629 aa12.27□□□□□ -0.45
TRAF3-208ENST00000560371 B4GALT3O60512 393 aa12.27□□□□□ -0.45
TRAF3-208ENST00000560371 SBK2P0C263 348 aa12.27□□□□□ -0.45
TRAF3-208ENST00000560371 LIPNQ5VXI9 398 aa12.27□□□□□ -0.45
TRAF3-208ENST00000560371 DHRS4L2Q6PKH6 230 aa12.27□□□□□ -0.45
TRAF3-208ENST00000560371 CDX2Q99626 313 aaPredicted RBP12.27□□□□□ -0.45
TRAF3-208ENST00000560371 LUZP4Q9P127 313 aa12.27□□□□□ -0.45
TRAF3-208ENST00000560371 KIAA1456Q9P272 454 aa12.27□□□□□ -0.45
TRAF3-208ENST00000560371 C7orf72A4D263 438 aa12.27□□□□□ -0.45
TRAF3-208ENST00000560371 FRG2CA6NGY1 282 aa12.27□□□□□ -0.45
TRAF3-208ENST00000560371 MPPED2Q15777 294 aa12.27□□□□□ -0.45
TRAF3-208ENST00000560371 SPACA9Q96E40 222 aaPredicted RBP12.27□□□□□ -0.45
TRAF3-208ENST00000560371 NECAP2Q9NVZ3 263 aa12.27□□□□□ -0.45
TRAF3-208ENST00000560371 ABCA3Q99758 1704 aa12.27□□□□□ -0.45
TRAF3-208ENST00000560371 TRBV5-4A0A0C4DH59 114 aa12.27□□□□□ -0.45
TRAF3-208ENST00000560371 FBXO24O75426 580 aa12.27□□□□□ -0.45
TRAF3-208ENST00000560371 ECI1P42126 302 aa12.27□□□□□ -0.45
TRAF3-208ENST00000560371 MTNR1BP49286 362 aa12.27□□□□□ -0.45
TRAF3-208ENST00000560371 TRIP6Q15654 476 aaKnown RBP12.27□□□□□ -0.45
TRAF3-208ENST00000560371 KDM4DQ6B0I6 523 aa12.27□□□□□ -0.45
TRAF3-208ENST00000560371 ZNF767PQ75MW2 155 aa12.27□□□□□ -0.45
TRAF3-208ENST00000560371 ZNF573Q86YE8 665 aa12.27□□□□□ -0.45
TRAF3-208ENST00000560371 PAQR8Q8TEZ7 354 aa12.27□□□□□ -0.45
TRAF3-208ENST00000560371 CTSFQ9UBX1 484 aa12.27□□□□□ -0.45
TRAF3-208ENST00000560371 RAB27BO00194 218 aa12.27□□□□□ -0.45
TRAF3-208ENST00000560371 PMP2P02689 132 aa12.27□□□□□ -0.45
TRAF3-208ENST00000560371 STEAP1BQ6NZ63 245 aa12.27□□□□□ -0.45
TRAF3-208ENST00000560371 ANKRD16Q6P6B7 361 aa12.27□□□□□ -0.45
TRAF3-208ENST00000560371 LYPD4Q6UWN0 246 aa12.27□□□□□ -0.45
TRAF3-208ENST00000560371 EGFL6Q8IUX8 553 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms