RNA–Protein interactions for RNA: ENST00000560260.5

SNX1-210, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 1,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-210ENST00000560260 OR8J1Q8NGP2 316 aa18.88■□□□□ 0.61
SNX1-210ENST00000560260 DNAJC27Q9NZQ0 273 aa18.88■□□□□ 0.61
SNX1-210ENST00000560260 CYB5R1Q9UHQ9 305 aa18.88■□□□□ 0.61
SNX1-210ENST00000560260 TIMM10BQ9Y5J6 103 aa18.88■□□□□ 0.61
SNX1-210ENST00000560260 RAI1Q7Z5J4 1906 aaPredicted RBP18.88■□□□□ 0.61
SNX1-210ENST00000560260 RER1O15258 196 aa18.87■□□□□ 0.61
SNX1-210ENST00000560260 CCL2P13500 99 aa18.87■□□□□ 0.61
SNX1-210ENST00000560260 GABRB1P18505 474 aa18.87■□□□□ 0.61
SNX1-210ENST00000560260 ENTPD1P49961 510 aa18.87■□□□□ 0.61
SNX1-210ENST00000560260 PCBD1P61457 104 aa18.87■□□□□ 0.61
SNX1-210ENST00000560260 RPS7P62081 194 aaKnown RBP18.87■□□□□ 0.61
SNX1-210ENST00000560260 ADARB1P78563 741 aaKnown RBP18.87■□□□□ 0.61
SNX1-210ENST00000560260 SCRN3Q0VDG4 424 aa18.87■□□□□ 0.61
SNX1-210ENST00000560260 KEAP1Q14145 624 aa18.87■□□□□ 0.61
SNX1-210ENST00000560260 PCK2Q16822 640 aa18.87■□□□□ 0.61
SNX1-210ENST00000560260 FBXW10Q5XX13 1052 aa18.87■□□□□ 0.61
SNX1-210ENST00000560260 VASH1Q7L8A9 365 aaPredicted RBP18.87■□□□□ 0.61
SNX1-210ENST00000560260 ENTHD1Q8IYW4 607 aa18.87■□□□□ 0.61
SNX1-210ENST00000560260 MAP6Q96JE9 813 aa18.87■□□□□ 0.61
SNX1-210ENST00000560260 WACQ9BTA9 647 aa18.87■□□□□ 0.61
SNX1-210ENST00000560260 IMPAD1Q9NX62 359 aa18.87■□□□□ 0.61
SNX1-210ENST00000560260 GDF2Q9UK05 429 aaPredicted RBP18.87■□□□□ 0.61
SNX1-210ENST00000560260 LOC100509620A0A075B734 347 aa18.86■□□□□ 0.61
SNX1-210ENST00000560260 DOK2O60496 412 aa18.86■□□□□ 0.61
SNX1-210ENST00000560260 SPARCP09486 303 aa18.86■□□□□ 0.61
SNX1-210ENST00000560260 ZNF823P16415 610 aa18.86■□□□□ 0.61
SNX1-210ENST00000560260 BLVRAP53004 296 aa18.86■□□□□ 0.61
SNX1-210ENST00000560260 AQP4P55087 323 aa18.86■□□□□ 0.61
SNX1-210ENST00000560260 MEPCEQ7L2J0 689 aaKnown RBP18.86■□□□□ 0.61
SNX1-210ENST00000560260 ERI1Q8IV48 349 aaKnown RBP18.86■□□□□ 0.61
SNX1-210ENST00000560260 SLC30A7Q8NEW0 376 aa18.86■□□□□ 0.61
SNX1-210ENST00000560260 OR10S1Q8NGN2 331 aa18.86■□□□□ 0.61
SNX1-210ENST00000560260 SMAP2Q8WU79 429 aaPredicted RBP18.86■□□□□ 0.61
SNX1-210ENST00000560260 CYGBQ8WWM9 190 aa18.86■□□□□ 0.61
SNX1-210ENST00000560260 ZNF582Q96NG8 517 aaPredicted RBP18.86■□□□□ 0.61
SNX1-210ENST00000560260 INTS14Q96SY0 518 aa18.86■□□□□ 0.61
SNX1-210ENST00000560260 TEAD3Q99594 435 aa18.86■□□□□ 0.61
SNX1-210ENST00000560260 ADI1Q9BV57 179 aa18.86■□□□□ 0.61
SNX1-210ENST00000560260 PLEKHF2Q9H8W4 249 aa18.86■□□□□ 0.61
SNX1-210ENST00000560260 PNRC2Q9NPJ4 139 aaKnown RBP18.86■□□□□ 0.61
SNX1-210ENST00000560260 KCNG2Q9UJ96 466 aa18.86■□□□□ 0.61
SNX1-210ENST00000560260 FBXL3Q9UKT7 428 aa18.86■□□□□ 0.61
SNX1-210ENST00000560260 APCP25054 2843 aa18.85■□□□□ 0.61
SNX1-210ENST00000560260 ZNF593O00488 134 aaPredicted RBP18.85■□□□□ 0.61
SNX1-210ENST00000560260 SGCEO43556 437 aa18.85■□□□□ 0.61
SNX1-210ENST00000560260 ZNF35P13682 527 aa18.85■□□□□ 0.61
SNX1-210ENST00000560260 NAA10P41227 235 aaPredicted RBP18.85■□□□□ 0.61
SNX1-210ENST00000560260 SNRPGP62308 76 aaKnown RBP18.85■□□□□ 0.61
SNX1-210ENST00000560260 HGFACQ04756 655 aa18.85■□□□□ 0.61
SNX1-210ENST00000560260 TEX30Q5JUR7 227 aa18.85■□□□□ 0.61
SNX1-210ENST00000560260 ZNF555Q8NEP9 628 aa18.85■□□□□ 0.61
SNX1-210ENST00000560260 OR6N2Q8NGY6 317 aa18.85■□□□□ 0.61
SNX1-210ENST00000560260 POM121L2Q96KW2 1035 aa18.85■□□□□ 0.61
SNX1-210ENST00000560260 ABCA12Q86UK0 2595 aa18.85■□□□□ 0.61
SNX1-210ENST00000560260 IQCMA0A1B0GVH7 501 aa18.84■□□□□ 0.61
SNX1-210ENST00000560260 OR6C6A6NF89 314 aa18.84■□□□□ 0.61
SNX1-210ENST00000560260 SYNGR3O43761 229 aa18.84■□□□□ 0.61
SNX1-210ENST00000560260 ENTPD6O75354 484 aa18.84■□□□□ 0.61
SNX1-210ENST00000560260 MRPL3P09001 348 aaKnown RBP18.84■□□□□ 0.61
SNX1-210ENST00000560260 CDH11P55287 796 aa18.84■□□□□ 0.61
SNX1-210ENST00000560260 GGTLC2Q14390 218 aa18.84■□□□□ 0.61
SNX1-210ENST00000560260 RAB35Q15286 201 aa18.84■□□□□ 0.61
SNX1-210ENST00000560260 ZNF691Q5VV52 312 aa18.84■□□□□ 0.61
SNX1-210ENST00000560260 SLC22A25Q6T423 547 aa18.84■□□□□ 0.61
SNX1-210ENST00000560260 GID4Q8IVV7 300 aa18.84■□□□□ 0.61
SNX1-210ENST00000560260 DHRSXQ8N5I4 330 aa18.84■□□□□ 0.61
SNX1-210ENST00000560260 APH1BQ8WW43 257 aa18.84■□□□□ 0.61
SNX1-210ENST00000560260 TRUB1Q8WWH5 349 aaKnown RBP18.84■□□□□ 0.61
SNX1-210ENST00000560260 SLC7A6Q92536 515 aa18.84■□□□□ 0.61
SNX1-210ENST00000560260 AKAP1Q92667 903 aaKnown RBP eCLIP18.84■□□□□ 0.61
SNX1-210ENST00000560260 NRGNQ92686 78 aa18.84■□□□□ 0.61
SNX1-210ENST00000560260 RADILQ96JH8 1075 aa18.84■□□□□ 0.61
SNX1-210ENST00000560260 AMELYQ99218 206 aa18.84■□□□□ 0.61
SNX1-210ENST00000560260 VCXQ9H320 206 aa18.84■□□□□ 0.61
SNX1-210ENST00000560260 PLEK2Q9NYT0 353 aa18.84■□□□□ 0.61
SNX1-210ENST00000560260 KLHDC2Q9Y2U9 406 aa18.84■□□□□ 0.61
SNX1-210ENST00000560260 ROS1P08922 2347 aa18.84■□□□□ 0.61
SNX1-210ENST00000560260 TACC2O95359 2948 aa18.84■□□□□ 0.61
SNX1-210ENST00000560260 LRBAP50851 2863 aa18.84■□□□□ 0.61
SNX1-210ENST00000560260 HEATR1Q9H583 2144 aaKnown RBP18.83■□□□□ 0.61
SNX1-210ENST00000560260 E7EQL1 145 aa18.83■□□□□ 0.61
SNX1-210ENST00000560260 CRYAAP02489 173 aa18.83■□□□□ 0.61
SNX1-210ENST00000560260 STOMP27105 288 aa18.83■□□□□ 0.61
SNX1-210ENST00000560260 CAPGP40121 348 aa18.83■□□□□ 0.61
SNX1-210ENST00000560260 HTR5AP47898 357 aa18.83■□□□□ 0.61
SNX1-210ENST00000560260 PLP2Q04941 152 aa18.83■□□□□ 0.61
SNX1-210ENST00000560260 ZNF672Q499Z4 452 aaPredicted RBP18.83■□□□□ 0.61
SNX1-210ENST00000560260 SLC25A30Q5SVS4 291 aa18.83■□□□□ 0.61
SNX1-210ENST00000560260 LCN1P1Q5VSP4 162 aa18.83■□□□□ 0.61
SNX1-210ENST00000560260 TMEM154Q6P9G4 183 aa18.83■□□□□ 0.61
SNX1-210ENST00000560260 DPY19L4Q7Z388 723 aa18.83■□□□□ 0.61
SNX1-210ENST00000560260 DCXRQ7Z4W1 244 aa18.83■□□□□ 0.61
SNX1-210ENST00000560260 DEPDC4Q8N2C3 294 aa18.83■□□□□ 0.61
SNX1-210ENST00000560260 GJC3Q8NFK1 279 aa18.83■□□□□ 0.61
SNX1-210ENST00000560260 RHOXF1Q8NHV9 184 aa18.83■□□□□ 0.61
SNX1-210ENST00000560260 ST7LQ8TDW4 575 aa18.83■□□□□ 0.61
SNX1-210ENST00000560260 CDADC1Q9BWV3 514 aa18.83■□□□□ 0.61
SNX1-210ENST00000560260 C1orf198Q9H425 327 aa18.83■□□□□ 0.61
SNX1-210ENST00000560260 RTTNQ86VV8 2226 aa18.83■□□□□ 0.6
SNX1-210ENST00000560260 SLC22A31A6NKX4 558 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms