RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 POLR1DQ9Y2S0 133 aa12.78□□□□□ -0.36
ZEB1-218ENST00000560196 ZNF879B4DU55 563 aa12.77□□□□□ -0.37
ZEB1-218ENST00000560196 ZNF878C9JN71 531 aa12.77□□□□□ -0.37
ZEB1-218ENST00000560196 MKRN2OSH3BPM6 223 aa12.77□□□□□ -0.37
ZEB1-218ENST00000560196 K7ENP7 123 aa12.77□□□□□ -0.37
ZEB1-218ENST00000560196 DVL2O14641 736 aa12.77□□□□□ -0.37
ZEB1-218ENST00000560196 WNT11O96014 354 aa12.77□□□□□ -0.37
ZEB1-218ENST00000560196 FCGR2AP12318 317 aa12.77□□□□□ -0.37
ZEB1-218ENST00000560196 CALRP27797 417 aaKnown RBP12.77□□□□□ -0.37
ZEB1-218ENST00000560196 S100A5P33763 92 aa12.77□□□□□ -0.37
ZEB1-218ENST00000560196 ETV6P41212 452 aa12.77□□□□□ -0.37
ZEB1-218ENST00000560196 MMP16P51512 607 aa12.77□□□□□ -0.37
ZEB1-218ENST00000560196 HIST1H3AP68431 136 aa12.77□□□□□ -0.37
ZEB1-218ENST00000560196 MXD1Q05195 221 aa12.77□□□□□ -0.37
ZEB1-218ENST00000560196 ENDOGQ14249 297 aaKnown RBP12.77□□□□□ -0.37
ZEB1-218ENST00000560196 NRN1LQ496H8 165 aa12.77□□□□□ -0.37
ZEB1-218ENST00000560196 Q499Y3 187 aa12.77□□□□□ -0.37
ZEB1-218ENST00000560196 WDR38Q5JTN6 314 aa12.77□□□□□ -0.37
ZEB1-218ENST00000560196 HIST2H3PS2Q5TEC6 136 aa12.77□□□□□ -0.37
ZEB1-218ENST00000560196 FAM27BQ5VT28 67 aa12.77□□□□□ -0.37
ZEB1-218ENST00000560196 OR7E24Q6IFN5 339 aa12.77□□□□□ -0.37
ZEB1-218ENST00000560196 INO80CQ6PI98 192 aaPredicted RBP12.77□□□□□ -0.37
ZEB1-218ENST00000560196 CORO6Q6QEF8 472 aa12.77□□□□□ -0.37
ZEB1-218ENST00000560196 HIST2H3AQ71DI3 136 aa12.77□□□□□ -0.37
ZEB1-218ENST00000560196 ADGRE4PQ86SQ3 457 aa12.77□□□□□ -0.37
ZEB1-218ENST00000560196 PRSS35Q8N3Z0 413 aa12.77□□□□□ -0.37
ZEB1-218ENST00000560196 OR10S1Q8NGN2 331 aa12.77□□□□□ -0.37
ZEB1-218ENST00000560196 OR13C5Q8NGS8 318 aa12.77□□□□□ -0.37
ZEB1-218ENST00000560196 FNDC9Q8TBE3 224 aa12.77□□□□□ -0.37
ZEB1-218ENST00000560196 WACQ9BTA9 647 aa12.77□□□□□ -0.37
ZEB1-218ENST00000560196 PRRG4Q9BZD6 226 aa12.77□□□□□ -0.37
ZEB1-218ENST00000560196 PPIL3Q9H2H8 161 aaKnown RBP12.77□□□□□ -0.37
ZEB1-218ENST00000560196 SMURF1Q9HCE7 757 aa12.77□□□□□ -0.37
ZEB1-218ENST00000560196 PALMDQ9NP74 551 aa12.77□□□□□ -0.37
ZEB1-218ENST00000560196 NOSIPQ9Y314 301 aaKnown RBP12.77□□□□□ -0.37
ZEB1-218ENST00000560196 TRBV5-7A0A0A0MS05 114 aa12.76□□□□□ -0.37
ZEB1-218ENST00000560196 ANKRD61A6NGH8 418 aa12.76□□□□□ -0.37
ZEB1-218ENST00000560196 RPL36A-HNRNPH2H7BZ11 118 aa12.76□□□□□ -0.37
ZEB1-218ENST00000560196 TAF4O00268 1085 aa12.76□□□□□ -0.37
ZEB1-218ENST00000560196 RRP8O43159 456 aaKnown RBP12.76□□□□□ -0.37
ZEB1-218ENST00000560196 TMEM127O75204 238 aa12.76□□□□□ -0.37
ZEB1-218ENST00000560196 MRPL33O75394 65 aaKnown RBP12.76□□□□□ -0.37
ZEB1-218ENST00000560196 PNPP00491 289 aa12.76□□□□□ -0.37
ZEB1-218ENST00000560196 RAF1P04049 648 aa12.76□□□□□ -0.37
ZEB1-218ENST00000560196 YES1P07947 543 aa12.76□□□□□ -0.37
ZEB1-218ENST00000560196 BMP4P12644 408 aa12.76□□□□□ -0.37
ZEB1-218ENST00000560196 CTSSP25774 331 aa12.76□□□□□ -0.37
ZEB1-218ENST00000560196 SGCAQ16586 387 aa12.76□□□□□ -0.37
ZEB1-218ENST00000560196 CFAP77Q6ZQR2 320 aa12.76□□□□□ -0.37
ZEB1-218ENST00000560196 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.76□□□□□ -0.37
ZEB1-218ENST00000560196 ZNF676Q8N7Q3 588 aa12.76□□□□□ -0.37
ZEB1-218ENST00000560196 GJC3Q8NFK1 279 aa12.76□□□□□ -0.37
ZEB1-218ENST00000560196 GPR148Q8TDV2 347 aa12.76□□□□□ -0.37
ZEB1-218ENST00000560196 ZNF775Q96BV0 537 aaPredicted RBP12.76□□□□□ -0.37
ZEB1-218ENST00000560196 WDFY2Q96P53 400 aa12.76□□□□□ -0.37
ZEB1-218ENST00000560196 DERL3Q96Q80 235 aa12.76□□□□□ -0.37
ZEB1-218ENST00000560196 OR14A2Q96R54 314 aa12.76□□□□□ -0.37
ZEB1-218ENST00000560196 ZNF416Q9BWM5 594 aa12.76□□□□□ -0.37
ZEB1-218ENST00000560196 RBM24Q9BX46 236 aaKnown RBP12.76□□□□□ -0.37
ZEB1-218ENST00000560196 C6orf62Q9GZU0 229 aaPredicted RBP12.76□□□□□ -0.37
ZEB1-218ENST00000560196 SLCO5A1Q9H2Y9 848 aa12.76□□□□□ -0.37
ZEB1-218ENST00000560196 TPK1Q9H3S4 243 aa12.76□□□□□ -0.37
ZEB1-218ENST00000560196 ZCCHC4Q9H5U6 513 aa12.76□□□□□ -0.37
ZEB1-218ENST00000560196 MOB1AQ9H8S9 216 aa12.76□□□□□ -0.37
ZEB1-218ENST00000560196 GPR35Q9HC97 309 aa12.76□□□□□ -0.37
ZEB1-218ENST00000560196 PNRC2Q9NPJ4 139 aaKnown RBP12.76□□□□□ -0.37
ZEB1-218ENST00000560196 CENPMQ9NSP4 180 aa12.76□□□□□ -0.37
ZEB1-218ENST00000560196 DDX28Q9NUL7 540 aaKnown RBP12.76□□□□□ -0.37
ZEB1-218ENST00000560196 TMEM38BQ9NVV0 291 aa12.76□□□□□ -0.37
ZEB1-218ENST00000560196 CAMK2AQ9UQM7 478 aa12.76□□□□□ -0.37
ZEB1-218ENST00000560196 A0A1B0GTH9 108 aa12.75□□□□□ -0.37
ZEB1-218ENST00000560196 ACOD1A6NK06 481 aa12.75□□□□□ -0.37
ZEB1-218ENST00000560196 LOC110117498-PIK3R3F6TDL0 507 aa12.75□□□□□ -0.37
ZEB1-218ENST00000560196 PIN1P1O15428 100 aa12.75□□□□□ -0.37
ZEB1-218ENST00000560196 ISG15P05161 165 aa12.75□□□□□ -0.37
ZEB1-218ENST00000560196 CST2P09228 141 aa12.75□□□□□ -0.37
ZEB1-218ENST00000560196 GRB2P62993 217 aaKnown RBP12.75□□□□□ -0.37
ZEB1-218ENST00000560196 MFGE8Q08431 387 aaPredicted RBP12.75□□□□□ -0.37
ZEB1-218ENST00000560196 HSD17B12Q53GQ0 312 aa12.75□□□□□ -0.37
ZEB1-218ENST00000560196 FAM27D1Q5T7N8 215 aa12.75□□□□□ -0.37
ZEB1-218ENST00000560196 KLHL24Q6TFL4 600 aa12.75□□□□□ -0.37
ZEB1-218ENST00000560196 ZNF704Q6ZNC4 412 aaPredicted RBP12.75□□□□□ -0.37
ZEB1-218ENST00000560196 SPATC1Q76KD6 591 aa12.75□□□□□ -0.37
ZEB1-218ENST00000560196 SYT9Q86SS6 491 aa12.75□□□□□ -0.37
ZEB1-218ENST00000560196 MCEMP1Q8IX19 187 aa12.75□□□□□ -0.37
ZEB1-218ENST00000560196 RBMXL3Q8N7X1 1067 aaKnown RBP12.75□□□□□ -0.37
ZEB1-218ENST00000560196 ACOT12Q8WYK0 555 aa12.75□□□□□ -0.37
ZEB1-218ENST00000560196 SARAFQ96BY9 339 aa12.75□□□□□ -0.37
ZEB1-218ENST00000560196 KCTD12Q96CX2 325 aaKnown RBP12.75□□□□□ -0.37
ZEB1-218ENST00000560196 KCNS3Q9BQ31 491 aa12.75□□□□□ -0.37
ZEB1-218ENST00000560196 CRLF2Q9HC73 371 aa12.75□□□□□ -0.37
ZEB1-218ENST00000560196 G6PC2Q9NQR9 355 aa12.75□□□□□ -0.37
ZEB1-218ENST00000560196 GLRX2Q9NS18 164 aa12.75□□□□□ -0.37
ZEB1-218ENST00000560196 CLCF1Q9UBD9 225 aa12.75□□□□□ -0.37
ZEB1-218ENST00000560196 ASH2LQ9UBL3 628 aa12.75□□□□□ -0.37
ZEB1-218ENST00000560196 OR52A1Q9UKL2 312 aa12.75□□□□□ -0.37
ZEB1-218ENST00000560196 DMXL1Q9Y485 3027 aa12.75□□□□□ -0.37
ZEB1-218ENST00000560196 TNRC6AQ8NDV7 1962 aaKnown RBP12.74□□□□□ -0.37
ZEB1-218ENST00000560196 A0A0G2JK05 382 aa12.74□□□□□ -0.37
ZEB1-218ENST00000560196 TMEM269A0A1B0GVZ9 245 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms