RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 NDUFB2O95178 105 aa10.7□□□□□ -0.7
SNX1-209ENST00000559961 H1F0P07305 194 aaKnown RBP10.7□□□□□ -0.7
SNX1-209ENST00000559961 MPV17P39210 176 aa10.7□□□□□ -0.7
SNX1-209ENST00000559961 WNT5AP41221 380 aa10.7□□□□□ -0.7
SNX1-209ENST00000559961 GPR4P46093 362 aa10.7□□□□□ -0.7
SNX1-209ENST00000559961 RPS6KA3P51812 740 aa10.7□□□□□ -0.7
SNX1-209ENST00000559961 GLB1L2Q8IW92 636 aa10.7□□□□□ -0.7
SNX1-209ENST00000559961 ZNF101Q8IZC7 436 aa10.7□□□□□ -0.7
SNX1-209ENST00000559961 BPIFB2Q8N4F0 458 aa10.7□□□□□ -0.7
SNX1-209ENST00000559961 SPICQ8N5J4 248 aa10.7□□□□□ -0.7
SNX1-209ENST00000559961 GCDHQ92947 438 aaPredicted RBP10.7□□□□□ -0.7
SNX1-209ENST00000559961 MCUR1Q96AQ8 359 aa10.7□□□□□ -0.7
SNX1-209ENST00000559961 NMD3Q96D46 503 aaKnown RBP10.7□□□□□ -0.7
SNX1-209ENST00000559961 NMNAT1Q9HAN9 279 aaPredicted RBP10.7□□□□□ -0.7
SNX1-209ENST00000559961 MED4Q9NPJ6 270 aa10.7□□□□□ -0.7
SNX1-209ENST00000559961 TBCCD1Q9NVR7 557 aa10.7□□□□□ -0.7
SNX1-209ENST00000559961 PLEK2Q9NYT0 353 aa10.7□□□□□ -0.7
SNX1-209ENST00000559961 SAMD4AQ9UPU9 718 aaKnown RBP10.7□□□□□ -0.7
SNX1-209ENST00000559961 ENPP4Q9Y6X5 453 aa10.7□□□□□ -0.7
SNX1-209ENST00000559961 A0A087WUU8 490 aa10.69□□□□□ -0.7
SNX1-209ENST00000559961 IGKV1D-43A0A0B4J1Z2 117 aa10.69□□□□□ -0.7
SNX1-209ENST00000559961 H7C1C5 153 aa10.69□□□□□ -0.7
SNX1-209ENST00000559961 WNT9BO14905 357 aa10.69□□□□□ -0.7
SNX1-209ENST00000559961 SLC16A7O60669 478 aa10.69□□□□□ -0.7
SNX1-209ENST00000559961 FOXH1O75593 365 aa10.69□□□□□ -0.7
SNX1-209ENST00000559961 SBK2P0C263 348 aa10.69□□□□□ -0.7
SNX1-209ENST00000559961 RHCEP18577 417 aa10.69□□□□□ -0.7
SNX1-209ENST00000559961 EPHA1P21709 976 aa10.69□□□□□ -0.7
SNX1-209ENST00000559961 CRABP1P29762 137 aa10.69□□□□□ -0.7
SNX1-209ENST00000559961 IFNGR2P38484 337 aa10.69□□□□□ -0.7
SNX1-209ENST00000559961 MDH1P40925 334 aaKnown RBP10.69□□□□□ -0.7
SNX1-209ENST00000559961 RGS6P49758 472 aa10.69□□□□□ -0.7
SNX1-209ENST00000559961 GSK3BP49841 420 aa10.69□□□□□ -0.7
SNX1-209ENST00000559961 MMP15P51511 669 aa10.69□□□□□ -0.7
SNX1-209ENST00000559961 LCN6P62502 163 aa10.69□□□□□ -0.7
SNX1-209ENST00000559961 AQP6Q13520 282 aa10.69□□□□□ -0.7
SNX1-209ENST00000559961 SLC27A4Q6P1M0 643 aa10.69□□□□□ -0.7
SNX1-209ENST00000559961 C1orf94Q6P1W5 598 aa10.69□□□□□ -0.7
SNX1-209ENST00000559961 PGM2L1Q6PCE3 622 aa10.69□□□□□ -0.7
SNX1-209ENST00000559961 TBPL2Q6SJ96 375 aa10.69□□□□□ -0.7
SNX1-209ENST00000559961 HACD2Q6Y1H2 254 aa10.69□□□□□ -0.7
SNX1-209ENST00000559961 FOXL2NBQ6ZUU3 175 aa10.69□□□□□ -0.7
SNX1-209ENST00000559961 ADCK1Q86TW2 530 aa10.69□□□□□ -0.7
SNX1-209ENST00000559961 MEX3DQ86XN8 651 aaKnown RBP10.69□□□□□ -0.7
SNX1-209ENST00000559961 CLDN22Q8N7P3 220 aa10.69□□□□□ -0.7
SNX1-209ENST00000559961 OR2Z1Q8NG97 314 aa10.69□□□□□ -0.7
SNX1-209ENST00000559961 PTP4A1Q93096 173 aa10.69□□□□□ -0.7
SNX1-209ENST00000559961 DCLRE1CQ96SD1 692 aaKnown RBP10.69□□□□□ -0.7
SNX1-209ENST00000559961 CDADC1Q9BWV3 514 aa10.69□□□□□ -0.7
SNX1-209ENST00000559961 CCDC134Q9H6E4 229 aa10.69□□□□□ -0.7
SNX1-209ENST00000559961 C7orf69Q9H7B7 122 aa10.69□□□□□ -0.7
SNX1-209ENST00000559961 EMC7Q9NPA0 242 aa10.69□□□□□ -0.7
SNX1-209ENST00000559961 ADA2Q9NZK5 511 aa10.69□□□□□ -0.7
SNX1-209ENST00000559961 SNX13Q9Y5W8 968 aa10.69□□□□□ -0.7
SNX1-209ENST00000559961 TEX13CA0A0J9YWL9 993 aa10.68□□□□□ -0.7
SNX1-209ENST00000559961 A0A1W2PRQ8 180 aa10.68□□□□□ -0.7
SNX1-209ENST00000559961 UNC119BA6NIH7 251 aa10.68□□□□□ -0.7
SNX1-209ENST00000559961 IFNL4K9M1U5 179 aa10.68□□□□□ -0.7
SNX1-209ENST00000559961 NGFP01138 241 aa10.68□□□□□ -0.7
SNX1-209ENST00000559961 IGHV2-5P01817 119 aa10.68□□□□□ -0.7
SNX1-209ENST00000559961 ADH4P08319 380 aa10.68□□□□□ -0.7
SNX1-209ENST00000559961 SDHAP31040 664 aa10.68□□□□□ -0.7
SNX1-209ENST00000559961 LIMS1P48059 325 aa10.68□□□□□ -0.7
SNX1-209ENST00000559961 PSME3P61289 254 aa10.68□□□□□ -0.7
SNX1-209ENST00000559961 LSM6P62312 80 aaKnown RBP10.68□□□□□ -0.7
SNX1-209ENST00000559961 KRR1Q13601 381 aaKnown RBP10.68□□□□□ -0.7
SNX1-209ENST00000559961 DGCR6Q14129 220 aa10.68□□□□□ -0.7
SNX1-209ENST00000559961 GLYATQ6IB77 296 aa10.68□□□□□ -0.7
SNX1-209ENST00000559961 CGB2Q6NT52 195 aa10.68□□□□□ -0.7
SNX1-209ENST00000559961 DPY19L2P2Q6ZN68 376 aa10.68□□□□□ -0.7
SNX1-209ENST00000559961 RFPL4BQ6ZWI9 263 aa10.68□□□□□ -0.7
SNX1-209ENST00000559961 USP43Q70EL4 1123 aa10.68□□□□□ -0.7
SNX1-209ENST00000559961 ZNF771Q7L3S4 317 aaPredicted RBP10.68□□□□□ -0.7
SNX1-209ENST00000559961 JAZF1Q86VZ6 243 aa10.68□□□□□ -0.7
SNX1-209ENST00000559961 ATG16L2Q8NAA4 619 aa10.68□□□□□ -0.7
SNX1-209ENST00000559961 LRRC75AQ8NAA5 344 aa10.68□□□□□ -0.7
SNX1-209ENST00000559961 FAM156AQ8NDB6 213 aa10.68□□□□□ -0.7
SNX1-209ENST00000559961 GJC3Q8NFK1 279 aa10.68□□□□□ -0.7
SNX1-209ENST00000559961 GTF3AQ92664 365 aaKnown RBP10.68□□□□□ -0.7
SNX1-209ENST00000559961 CMBLQ96DG6 245 aa10.68□□□□□ -0.7
SNX1-209ENST00000559961 FAM46AQ96IP4 442 aaKnown RBP10.68□□□□□ -0.7
SNX1-209ENST00000559961 Q96M85 177 aa10.68□□□□□ -0.7
SNX1-209ENST00000559961 RBM4Q9BWF3 364 aaKnown RBP10.68□□□□□ -0.7
SNX1-209ENST00000559961 NSRP1Q9H0G5 558 aaKnown RBP10.68□□□□□ -0.7
SNX1-209ENST00000559961 MSL2Q9HCI7 577 aa10.68□□□□□ -0.7
SNX1-209ENST00000559961 SPAG4Q9NPE6 437 aa10.68□□□□□ -0.7
SNX1-209ENST00000559961 PURGQ9UJV8 347 aaKnown RBP10.68□□□□□ -0.7
SNX1-209ENST00000559961 TMCC3Q9ULS5 477 aa10.68□□□□□ -0.7
SNX1-209ENST00000559961 PPP1R3CQ9UQK1 317 aa10.68□□□□□ -0.7
SNX1-209ENST00000559961 ADAM18Q9Y3Q7 739 aa10.68□□□□□ -0.7
SNX1-209ENST00000559961 NPTNQ9Y639 398 aa10.68□□□□□ -0.7
SNX1-209ENST00000559961 LOC105371242A0A075B767 164 aa10.67□□□□□ -0.7
SNX1-209ENST00000559961 OR6C6A6NF89 314 aa10.67□□□□□ -0.7
SNX1-209ENST00000559961 ZSCAN5BA6NJL1 495 aa10.67□□□□□ -0.7
SNX1-209ENST00000559961 J3QW42 95 aa10.67□□□□□ -0.7
SNX1-209ENST00000559961 NME4O00746 187 aa10.67□□□□□ -0.7
SNX1-209ENST00000559961 FFAR1O14842 300 aa10.67□□□□□ -0.7
SNX1-209ENST00000559961 ICMTO60725 284 aa10.67□□□□□ -0.7
SNX1-209ENST00000559961 RENP00797 406 aa10.67□□□□□ -0.7
SNX1-209ENST00000559961 CD55P08174 381 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms