RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 PYCR1P32322 319 aa12.72□□□□□ -0.37
RABGGTA-211ENST00000559850 MPV17P39210 176 aa12.72□□□□□ -0.37
RABGGTA-211ENST00000559850 RAD52P43351 418 aa12.72□□□□□ -0.37
RABGGTA-211ENST00000559850 HTR5AP47898 357 aa12.72□□□□□ -0.37
RABGGTA-211ENST00000559850 PDLIM4P50479 330 aa12.72□□□□□ -0.37
RABGGTA-211ENST00000559850 RIPPLY3P57055 190 aa12.72□□□□□ -0.37
RABGGTA-211ENST00000559850 CORO6Q6QEF8 472 aa12.72□□□□□ -0.37
RABGGTA-211ENST00000559850 RASSF6Q6ZTQ3 369 aa12.72□□□□□ -0.37
RABGGTA-211ENST00000559850 VASH1Q7L8A9 365 aaPredicted RBP12.72□□□□□ -0.37
RABGGTA-211ENST00000559850 ALDH16A1Q8IZ83 802 aa12.72□□□□□ -0.37
RABGGTA-211ENST00000559850 HS3ST5Q8IZT8 346 aa12.72□□□□□ -0.37
RABGGTA-211ENST00000559850 LINC00471Q8N535 108 aa12.72□□□□□ -0.37
RABGGTA-211ENST00000559850 OR52L1Q8NGH7 329 aa12.72□□□□□ -0.37
RABGGTA-211ENST00000559850 ABHD4Q8TB40 342 aa12.72□□□□□ -0.37
RABGGTA-211ENST00000559850 SYNPRQ8TBG9 265 aa12.72□□□□□ -0.37
RABGGTA-211ENST00000559850 SLC25A40Q8TBP6 338 aa12.72□□□□□ -0.37
RABGGTA-211ENST00000559850 ZNRF4Q8WWF5 429 aa12.72□□□□□ -0.37
RABGGTA-211ENST00000559850 SLCO4A1Q96BD0 722 aa12.72□□□□□ -0.37
RABGGTA-211ENST00000559850 TSSK6Q9BXA6 273 aa12.72□□□□□ -0.37
RABGGTA-211ENST00000559850 POFUT1Q9H488 388 aa12.72□□□□□ -0.37
RABGGTA-211ENST00000559850 TAAR3PQ9P1P4 343 aa12.72□□□□□ -0.37
RABGGTA-211ENST00000559850 POLR1DQ9Y2S0 133 aa12.72□□□□□ -0.37
RABGGTA-211ENST00000559850 GNGT2O14610 69 aa12.71□□□□□ -0.37
RABGGTA-211ENST00000559850 RER1O15258 196 aa12.71□□□□□ -0.37
RABGGTA-211ENST00000559850 SGCEO43556 437 aa12.71□□□□□ -0.37
RABGGTA-211ENST00000559850 FKBP6O75344 327 aa12.71□□□□□ -0.37
RABGGTA-211ENST00000559850 DAOP14920 347 aa12.71□□□□□ -0.37
RABGGTA-211ENST00000559850 HOXB4P17483 251 aaPredicted RBP12.71□□□□□ -0.37
RABGGTA-211ENST00000559850 EVX1P49640 407 aa12.71□□□□□ -0.37
RABGGTA-211ENST00000559850 DSCR9P59020 149 aa12.71□□□□□ -0.37
RABGGTA-211ENST00000559850 CBX1P83916 185 aa12.71□□□□□ -0.37
RABGGTA-211ENST00000559850 SCRN3Q0VDG4 424 aa12.71□□□□□ -0.37
RABGGTA-211ENST00000559850 GGTLC2Q14390 218 aa12.71□□□□□ -0.37
RABGGTA-211ENST00000559850 NKPD1Q17RQ9 610 aa12.71□□□□□ -0.37
RABGGTA-211ENST00000559850 CCDC92Q53HC0 331 aaPredicted RBP12.71□□□□□ -0.37
RABGGTA-211ENST00000559850 DNM1P34Q6PK57 102 aa12.71□□□□□ -0.37
RABGGTA-211ENST00000559850 LYPD4Q6UWN0 246 aa12.71□□□□□ -0.37
RABGGTA-211ENST00000559850 SYT9Q86SS6 491 aa12.71□□□□□ -0.37
RABGGTA-211ENST00000559850 LINC00346Q8IVM7 164 aa12.71□□□□□ -0.37
RABGGTA-211ENST00000559850 IQCF1Q8N6M8 205 aa12.71□□□□□ -0.37
RABGGTA-211ENST00000559850 NPEPL1Q8NDH3 523 aa12.71□□□□□ -0.37
RABGGTA-211ENST00000559850 OR51L1Q8NGJ5 315 aa12.71□□□□□ -0.37
RABGGTA-211ENST00000559850 OR9Q1Q8NGQ5 310 aa12.71□□□□□ -0.37
RABGGTA-211ENST00000559850 GIPC3Q8TF64 312 aa12.71□□□□□ -0.37
RABGGTA-211ENST00000559850 FEVQ99581 238 aa12.71□□□□□ -0.37
RABGGTA-211ENST00000559850 BCL2L14Q9BZR8 327 aa12.71□□□□□ -0.37
RABGGTA-211ENST00000559850 PLEK2Q9NYT0 353 aa12.71□□□□□ -0.37
RABGGTA-211ENST00000559850 IL20Q9NYY1 176 aa12.71□□□□□ -0.37
RABGGTA-211ENST00000559850 PDP1Q9P0J1 537 aaPredicted RBP12.71□□□□□ -0.37
RABGGTA-211ENST00000559850 EIF3KQ9UBQ5 218 aaKnown RBP12.71□□□□□ -0.37
RABGGTA-211ENST00000559850 LHFPL6Q9Y693 200 aa12.71□□□□□ -0.37
RABGGTA-211ENST00000559850 NF1P21359 2839 aa12.71□□□□□ -0.37
RABGGTA-211ENST00000559850 TCRBV3S1A0A5B6 114 aa12.7□□□□□ -0.38
RABGGTA-211ENST00000559850 VWC2LB2RUY7 222 aa12.7□□□□□ -0.38
RABGGTA-211ENST00000559850 INAFM1C9JVW0 142 aa12.7□□□□□ -0.38
RABGGTA-211ENST00000559850 TFP02787 698 aa12.7□□□□□ -0.38
RABGGTA-211ENST00000559850 HPXP02790 462 aa12.7□□□□□ -0.38
RABGGTA-211ENST00000559850 DBHP09172 617 aa12.7□□□□□ -0.38
RABGGTA-211ENST00000559850 ZNF250P15622 560 aa12.7□□□□□ -0.38
RABGGTA-211ENST00000559850 PRKACGP22612 351 aa12.7□□□□□ -0.38
RABGGTA-211ENST00000559850 CRABP1P29762 137 aa12.7□□□□□ -0.38
RABGGTA-211ENST00000559850 MAGEB1P43366 347 aa12.7□□□□□ -0.38
RABGGTA-211ENST00000559850 KLF3P57682 345 aaPredicted RBP12.7□□□□□ -0.38
RABGGTA-211ENST00000559850 PPP1CBP62140 327 aa12.7□□□□□ -0.38
RABGGTA-211ENST00000559850 TEKQ02763 1124 aa12.7□□□□□ -0.38
RABGGTA-211ENST00000559850 AQP6Q13520 282 aa12.7□□□□□ -0.38
RABGGTA-211ENST00000559850 ZNF362Q5T0B9 420 aaPredicted RBP12.7□□□□□ -0.38
RABGGTA-211ENST00000559850 SLC37A3Q8NCC5 494 aa12.7□□□□□ -0.38
RABGGTA-211ENST00000559850 SLC26A10Q8NG04 563 aa12.7□□□□□ -0.38
RABGGTA-211ENST00000559850 IPCEF1Q8WWN9 437 aaPredicted RBP12.7□□□□□ -0.38
RABGGTA-211ENST00000559850 NEU4Q8WWR8 484 aaPredicted RBP12.7□□□□□ -0.38
RABGGTA-211ENST00000559850 C4orf45Q96LM5 186 aa12.7□□□□□ -0.38
RABGGTA-211ENST00000559850 DGCR6LQ9BY27 220 aa12.7□□□□□ -0.38
RABGGTA-211ENST00000559850 OR2J1Q9GZK6 312 aa12.7□□□□□ -0.38
RABGGTA-211ENST00000559850 IGLV3-9A0A075B6K5 115 aa12.69□□□□□ -0.38
RABGGTA-211ENST00000559850 TVP23AA6NH52 213 aa12.69□□□□□ -0.38
RABGGTA-211ENST00000559850 IDH3BO43837 385 aa12.69□□□□□ -0.38
RABGGTA-211ENST00000559850 TIPRLO75663 272 aa12.69□□□□□ -0.38
RABGGTA-211ENST00000559850 NCR1O76036 304 aa12.69□□□□□ -0.38
RABGGTA-211ENST00000559850 HLA-DQA2P01906 255 aa12.69□□□□□ -0.38
RABGGTA-211ENST00000559850 GYPBP06028 91 aa12.69□□□□□ -0.38
RABGGTA-211ENST00000559850 ERCC1P07992 297 aaPredicted RBP12.69□□□□□ -0.38
RABGGTA-211ENST00000559850 CSF3P09919 207 aa12.69□□□□□ -0.38
RABGGTA-211ENST00000559850 CLUP10909 449 aa12.69□□□□□ -0.38
RABGGTA-211ENST00000559850 PSKH1P11801 424 aa12.69□□□□□ -0.38
RABGGTA-211ENST00000559850 SLC25A16P16260 332 aa12.69□□□□□ -0.38
RABGGTA-211ENST00000559850 RPS27P42677 84 aaKnown RBP12.69□□□□□ -0.38
RABGGTA-211ENST00000559850 NR4A2P43354 598 aa12.69□□□□□ -0.38
RABGGTA-211ENST00000559850 LSM6P62312 80 aaKnown RBP12.69□□□□□ -0.38
RABGGTA-211ENST00000559850 CRMP1Q14194 572 aa12.69□□□□□ -0.38
RABGGTA-211ENST00000559850 KCNMB1Q16558 191 aa12.69□□□□□ -0.38
RABGGTA-211ENST00000559850 SLC36A3Q495N2 470 aa12.69□□□□□ -0.38
RABGGTA-211ENST00000559850 RPL13AP3Q6NVV1 102 aa12.69□□□□□ -0.38
RABGGTA-211ENST00000559850 TMEM154Q6P9G4 183 aa12.69□□□□□ -0.38
RABGGTA-211ENST00000559850 CFAP77Q6ZQR2 320 aa12.69□□□□□ -0.38
RABGGTA-211ENST00000559850 ZBTB46Q86UZ6 589 aa12.69□□□□□ -0.38
RABGGTA-211ENST00000559850 OR1F12Q8NHA8 337 aa12.69□□□□□ -0.38
RABGGTA-211ENST00000559850 UBASH3BQ8TF42 649 aa12.69□□□□□ -0.38
RABGGTA-211ENST00000559850 MARS2Q96GW9 593 aaKnown RBP12.69□□□□□ -0.38
RABGGTA-211ENST00000559850 SNX18Q96RF0 628 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms