RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 CRABP1P29762 137 aa7.02□□□□□ -1.29
SNX1-207ENST00000559401 WNT5AP41221 380 aa7.02□□□□□ -1.29
SNX1-207ENST00000559401 GSSP48637 474 aa7.02□□□□□ -1.29
SNX1-207ENST00000559401 GZMKP49863 264 aa7.02□□□□□ -1.29
SNX1-207ENST00000559401 PPP1CBP62140 327 aa7.02□□□□□ -1.29
SNX1-207ENST00000559401 MS4A2Q01362 244 aa7.02□□□□□ -1.29
SNX1-207ENST00000559401 MOGQ16653 247 aa7.02□□□□□ -1.29
SNX1-207ENST00000559401 TSTQ16762 297 aaKnown RBP7.02□□□□□ -1.29
SNX1-207ENST00000559401 SLC35F1Q5T1Q4 408 aa7.02□□□□□ -1.29
SNX1-207ENST00000559401 C6orf52Q5T4I8 152 aa7.02□□□□□ -1.29
SNX1-207ENST00000559401 OR2T5Q6IEZ7 315 aa7.02□□□□□ -1.29
SNX1-207ENST00000559401 RPL13AP3Q6NVV1 102 aa7.02□□□□□ -1.29
SNX1-207ENST00000559401 ZNF620Q6ZNG0 422 aa7.02□□□□□ -1.29
SNX1-207ENST00000559401 SYT9Q86SS6 491 aa7.02□□□□□ -1.29
SNX1-207ENST00000559401 ZNF786Q8N393 782 aa7.02□□□□□ -1.29
SNX1-207ENST00000559401 LINC00471Q8N535 108 aa7.02□□□□□ -1.29
SNX1-207ENST00000559401 AQP11Q8NBQ7 271 aa7.02□□□□□ -1.29
SNX1-207ENST00000559401 SDR9C7Q8NEX9 313 aa7.02□□□□□ -1.29
SNX1-207ENST00000559401 OR52E2Q8NGJ4 325 aa7.02□□□□□ -1.29
SNX1-207ENST00000559401 OR2T29Q8NH02 315 aa7.02□□□□□ -1.29
SNX1-207ENST00000559401 SLC25A40Q8TBP6 338 aa7.02□□□□□ -1.29
SNX1-207ENST00000559401 IPCEF1Q8WWN9 437 aaPredicted RBP7.02□□□□□ -1.29
SNX1-207ENST00000559401 SNX18Q96RF0 628 aa7.02□□□□□ -1.29
SNX1-207ENST00000559401 BTBD10Q9BSF8 475 aa7.02□□□□□ -1.29
SNX1-207ENST00000559401 WACQ9BTA9 647 aa7.02□□□□□ -1.29
SNX1-207ENST00000559401 OR2J1Q9GZK6 312 aa7.02□□□□□ -1.29
SNX1-207ENST00000559401 C1orf21Q9H246 121 aa7.02□□□□□ -1.29
SNX1-207ENST00000559401 NARFLQ9H6Q4 476 aa7.02□□□□□ -1.29
SNX1-207ENST00000559401 EGLN3Q9H6Z9 239 aa7.02□□□□□ -1.29
SNX1-207ENST00000559401 CHODLQ9H9P2 273 aa7.02□□□□□ -1.29
SNX1-207ENST00000559401 ELOVL3Q9HB03 270 aa7.02□□□□□ -1.29
SNX1-207ENST00000559401 RPRD1BQ9NQG5 326 aaKnown RBP7.02□□□□□ -1.29
SNX1-207ENST00000559401 TBC1D23Q9NUY8 699 aa7.02□□□□□ -1.29
SNX1-207ENST00000559401 SLCO1C1Q9NYB5 712 aa7.02□□□□□ -1.29
SNX1-207ENST00000559401 TAS2R1Q9NYW7 299 aa7.02□□□□□ -1.29
SNX1-207ENST00000559401 VSX1Q9NZR4 365 aaPredicted RBP7.02□□□□□ -1.29
SNX1-207ENST00000559401 GRIP1Q9Y3R0 1128 aa7.02□□□□□ -1.29
SNX1-207ENST00000559401 SAMHD1Q9Y3Z3 626 aaKnown RBP7.02□□□□□ -1.29
SNX1-207ENST00000559401 CDH10Q9Y6N8 788 aa7.02□□□□□ -1.29
SNX1-207ENST00000559401 VPS13CQ709C8 3753 aa7.02□□□□□ -1.29
SNX1-207ENST00000559401 ZANQ9Y493 2812 aa7.01□□□□□ -1.29
SNX1-207ENST00000559401 ABCA1O95477 2261 aa7.01□□□□□ -1.29
SNX1-207ENST00000559401 YLPM1P49750 1951 aaKnown RBP7.01□□□□□ -1.29
SNX1-207ENST00000559401 IGLV3-9A0A075B6K5 115 aa7.01□□□□□ -1.29
SNX1-207ENST00000559401 LOC100289279A0A1B0GTE1 492 aa7.01□□□□□ -1.29
SNX1-207ENST00000559401 LRP5LA4QPB2 252 aa7.01□□□□□ -1.29
SNX1-207ENST00000559401 C17orf100A8MU93 164 aa7.01□□□□□ -1.29
SNX1-207ENST00000559401 DCTN6O00399 190 aa7.01□□□□□ -1.29
SNX1-207ENST00000559401 GNGT2O14610 69 aa7.01□□□□□ -1.29
SNX1-207ENST00000559401 ARPC3O15145 178 aa7.01□□□□□ -1.29
SNX1-207ENST00000559401 SPRY3O43610 288 aa7.01□□□□□ -1.29
SNX1-207ENST00000559401 TIMM8AO60220 97 aaPredicted RBP7.01□□□□□ -1.29
SNX1-207ENST00000559401 CDC14BO60729 498 aa7.01□□□□□ -1.29
SNX1-207ENST00000559401 NCR1O76036 304 aa7.01□□□□□ -1.29
SNX1-207ENST00000559401 SOX14O95416 240 aa7.01□□□□□ -1.29
SNX1-207ENST00000559401 NGFP01138 241 aa7.01□□□□□ -1.29
SNX1-207ENST00000559401 IGHV4-31P0DP07 118 aa7.01□□□□□ -1.29
SNX1-207ENST00000559401 RAP2AP10114 183 aa7.01□□□□□ -1.29
SNX1-207ENST00000559401 ZNF23P17027 643 aa7.01□□□□□ -1.29
SNX1-207ENST00000559401 GSTM3P21266 225 aa7.01□□□□□ -1.29
SNX1-207ENST00000559401 MPV17P39210 176 aa7.01□□□□□ -1.29
SNX1-207ENST00000559401 MAGEA2P43356 314 aa7.01□□□□□ -1.29
SNX1-207ENST00000559401 MAGEB1P43366 347 aa7.01□□□□□ -1.29
SNX1-207ENST00000559401 GPR6P46095 362 aaPredicted RBP7.01□□□□□ -1.29
SNX1-207ENST00000559401 ZNF81P51508 661 aa7.01□□□□□ -1.29
SNX1-207ENST00000559401 CHN2P52757 468 aa7.01□□□□□ -1.29
SNX1-207ENST00000559401 LSM6P62312 80 aaKnown RBP7.01□□□□□ -1.29
SNX1-207ENST00000559401 CCL8P80075 99 aa7.01□□□□□ -1.29
SNX1-207ENST00000559401 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.01□□□□□ -1.29
SNX1-207ENST00000559401 DBPQ10586 325 aaPredicted RBP7.01□□□□□ -1.29
SNX1-207ENST00000559401 CCNIQ14094 377 aa7.01□□□□□ -1.29
SNX1-207ENST00000559401 MEP1BQ16820 701 aa7.01□□□□□ -1.29
SNX1-207ENST00000559401 DNAL1Q4LDG9 190 aa7.01□□□□□ -1.29
SNX1-207ENST00000559401 CYB5R2Q6BCY4 276 aa7.01□□□□□ -1.29
SNX1-207ENST00000559401 PGM2L1Q6PCE3 622 aa7.01□□□□□ -1.29
SNX1-207ENST00000559401 VASH1Q7L8A9 365 aaPredicted RBP7.01□□□□□ -1.29
SNX1-207ENST00000559401 SPATA24Q86W54 205 aa7.01□□□□□ -1.29
SNX1-207ENST00000559401 SLC7A6Q92536 515 aa7.01□□□□□ -1.29
SNX1-207ENST00000559401 GTF3AQ92664 365 aaKnown RBP7.01□□□□□ -1.29
SNX1-207ENST00000559401 RDH5Q92781 318 aa7.01□□□□□ -1.29
SNX1-207ENST00000559401 POP5Q969H6 163 aaKnown RBP7.01□□□□□ -1.29
SNX1-207ENST00000559401 C4orf45Q96LM5 186 aa7.01□□□□□ -1.29
SNX1-207ENST00000559401 DECR2Q9NUI1 292 aa7.01□□□□□ -1.29
SNX1-207ENST00000559401 VNN3Q9NY84 501 aa7.01□□□□□ -1.29
SNX1-207ENST00000559401 B9D1Q9UPM9 204 aa7.01□□□□□ -1.29
SNX1-207ENST00000559401 RTTNQ86VV8 2226 aa7.01□□□□□ -1.29
SNX1-207ENST00000559401 NIPBLQ6KC79 2804 aaeCLIP7□□□□□ -1.29
SNX1-207ENST00000559401 NAV3Q8IVL0 2385 aa7□□□□□ -1.29
SNX1-207ENST00000559401 IGLV1-36A0A0B4J1U3 117 aa7□□□□□ -1.29
SNX1-207ENST00000559401 DHRS12A0PJE2 317 aa7□□□□□ -1.29
SNX1-207ENST00000559401 H3BN98 237 aa7□□□□□ -1.29
SNX1-207ENST00000559401 RER1O15258 196 aa7□□□□□ -1.29
SNX1-207ENST00000559401 PPIHO43447 177 aaKnown RBP7□□□□□ -1.29
SNX1-207ENST00000559401 IDH3BO43837 385 aa7□□□□□ -1.29
SNX1-207ENST00000559401 E2F6O75461 281 aa7□□□□□ -1.29
SNX1-207ENST00000559401 CRLF1O75462 422 aa7□□□□□ -1.29
SNX1-207ENST00000559401 CST1P01037 141 aa7□□□□□ -1.29
SNX1-207ENST00000559401 GASTP01350 101 aa7□□□□□ -1.29
SNX1-207ENST00000559401 IGHV3-13P01766 116 aa7□□□□□ -1.29
SNX1-207ENST00000559401 GAAP10253 952 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms