RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 ARR3P36575 388 aa12.88□□□□□ -0.35
SNRPA1-207ENST00000559309 MTNR1AP48039 350 aa12.88□□□□□ -0.35
SNRPA1-207ENST00000559309 PCBD1P61457 104 aa12.88□□□□□ -0.35
SNRPA1-207ENST00000559309 RAB1AP62820 205 aa12.88□□□□□ -0.35
SNRPA1-207ENST00000559309 POU4F2Q12837 409 aa12.88□□□□□ -0.35
SNRPA1-207ENST00000559309 DAZAP2Q15038 168 aaPredicted RBP12.88□□□□□ -0.35
SNRPA1-207ENST00000559309 PPA1Q15181 289 aa12.88□□□□□ -0.35
SNRPA1-207ENST00000559309 CCDC92Q53HC0 331 aaPredicted RBP12.88□□□□□ -0.35
SNRPA1-207ENST00000559309 OTPQ5XKR4 325 aa12.88□□□□□ -0.35
SNRPA1-207ENST00000559309 DPY19L4Q7Z388 723 aa12.88□□□□□ -0.35
SNRPA1-207ENST00000559309 MDP1Q86V88 176 aa12.88□□□□□ -0.35
SNRPA1-207ENST00000559309 MYPOPQ86VE0 399 aaPredicted RBP12.88□□□□□ -0.35
SNRPA1-207ENST00000559309 LRRC18Q8N456 261 aa12.88□□□□□ -0.35
SNRPA1-207ENST00000559309 PIP4P2Q8N4L2 257 aa12.88□□□□□ -0.35
SNRPA1-207ENST00000559309 OR6K6Q8NGW6 343 aa12.88□□□□□ -0.35
SNRPA1-207ENST00000559309 LGALS12Q96DT0 336 aa12.88□□□□□ -0.35
SNRPA1-207ENST00000559309 MNTQ99583 582 aa12.88□□□□□ -0.35
SNRPA1-207ENST00000559309 OR2H1Q9GZK4 316 aa12.88□□□□□ -0.35
SNRPA1-207ENST00000559309 YIPF3Q9GZM5 350 aa12.88□□□□□ -0.35
SNRPA1-207ENST00000559309 DDX28Q9NUL7 540 aaKnown RBP12.88□□□□□ -0.35
SNRPA1-207ENST00000559309 CLN6Q9NWW5 311 aa12.88□□□□□ -0.35
SNRPA1-207ENST00000559309 H2AFY2Q9P0M6 372 aaPredicted RBP12.88□□□□□ -0.35
SNRPA1-207ENST00000559309 ASH2LQ9UBL3 628 aa12.88□□□□□ -0.35
SNRPA1-207ENST00000559309 NDRG3Q9UGV2 375 aa12.88□□□□□ -0.35
SNRPA1-207ENST00000559309 TIMM10BQ9Y5J6 103 aa12.88□□□□□ -0.35
SNRPA1-207ENST00000559309 A0A1W2PR80 420 aa12.87□□□□□ -0.35
SNRPA1-207ENST00000559309 TUBAL3A6NHL2 446 aa12.87□□□□□ -0.35
SNRPA1-207ENST00000559309 DEFB108AA8MXU0 73 aa12.87□□□□□ -0.35
SNRPA1-207ENST00000559309 SYNGR3O43761 229 aa12.87□□□□□ -0.35
SNRPA1-207ENST00000559309 ADRA2AP08913 450 aa12.87□□□□□ -0.35
SNRPA1-207ENST00000559309 PATE4P0C8F1 98 aa12.87□□□□□ -0.35
SNRPA1-207ENST00000559309 PIPP12273 146 aaPredicted RBP12.87□□□□□ -0.35
SNRPA1-207ENST00000559309 GUCA1AP43080 201 aaPredicted RBP12.87□□□□□ -0.35
SNRPA1-207ENST00000559309 TUBA1BP68363 451 aa12.87□□□□□ -0.35
SNRPA1-207ENST00000559309 TUBA4AP68366 448 aa12.87□□□□□ -0.35
SNRPA1-207ENST00000559309 ADAM8P78325 824 aa12.87□□□□□ -0.35
SNRPA1-207ENST00000559309 RAB40BQ12829 278 aa12.87□□□□□ -0.35
SNRPA1-207ENST00000559309 GSG1Q2KHT4 349 aa12.87□□□□□ -0.35
SNRPA1-207ENST00000559309 C6orf141Q5SZD1 244 aa12.87□□□□□ -0.35
SNRPA1-207ENST00000559309 ZNF684Q5T5D7 378 aa12.87□□□□□ -0.35
SNRPA1-207ENST00000559309 CFAP77Q6ZQR2 320 aa12.87□□□□□ -0.35
SNRPA1-207ENST00000559309 TUBA1AQ71U36 451 aa12.87□□□□□ -0.35
SNRPA1-207ENST00000559309 VASH1Q7L8A9 365 aaPredicted RBP12.87□□□□□ -0.35
SNRPA1-207ENST00000559309 SHFQ7M4L6 423 aa12.87□□□□□ -0.35
SNRPA1-207ENST00000559309 ZNF454Q8N9F8 522 aa12.87□□□□□ -0.35
SNRPA1-207ENST00000559309 CPEB3Q8NE35 698 aaKnown RBP12.87□□□□□ -0.35
SNRPA1-207ENST00000559309 GJC3Q8NFK1 279 aa12.87□□□□□ -0.35
SNRPA1-207ENST00000559309 OR52N5Q8NH56 324 aa12.87□□□□□ -0.35
SNRPA1-207ENST00000559309 LINC01560Q8TB33 94 aa12.87□□□□□ -0.35
SNRPA1-207ENST00000559309 FAM222BQ8WU58 562 aa12.87□□□□□ -0.35
SNRPA1-207ENST00000559309 RNF133Q8WVZ7 376 aa12.87□□□□□ -0.35
SNRPA1-207ENST00000559309 NANOS1Q8WY41 292 aaKnown RBP12.87□□□□□ -0.35
SNRPA1-207ENST00000559309 OTULINQ96BN8 352 aa12.87□□□□□ -0.35
SNRPA1-207ENST00000559309 AMELYQ99218 206 aa12.87□□□□□ -0.35
SNRPA1-207ENST00000559309 CNN2Q99439 309 aaKnown RBP12.87□□□□□ -0.35
SNRPA1-207ENST00000559309 FGF20Q9NP95 211 aaPredicted RBP12.87□□□□□ -0.35
SNRPA1-207ENST00000559309 CRIM1Q9NZV1 1036 aa12.87□□□□□ -0.35
SNRPA1-207ENST00000559309 GDF2Q9UK05 429 aaPredicted RBP12.87□□□□□ -0.35
SNRPA1-207ENST00000559309 FBXL3Q9UKT7 428 aa12.87□□□□□ -0.35
SNRPA1-207ENST00000559309 KLHDC2Q9Y2U9 406 aa12.87□□□□□ -0.35
SNRPA1-207ENST00000559309 RPL36Q9Y3U8 105 aaKnown RBP12.87□□□□□ -0.35
SNRPA1-207ENST00000559309 IGHV1-18A0A0C4DH31 117 aa12.86□□□□□ -0.35
SNRPA1-207ENST00000559309 TRIM64A6NGJ6 449 aa12.86□□□□□ -0.35
SNRPA1-207ENST00000559309 SNTNA6NMZ2 147 aa12.86□□□□□ -0.35
SNRPA1-207ENST00000559309 PRR32B1ATL7 298 aa12.86□□□□□ -0.35
SNRPA1-207ENST00000559309 RER1O15258 196 aa12.86□□□□□ -0.35
SNRPA1-207ENST00000559309 GOSR1O95249 250 aa12.86□□□□□ -0.35
SNRPA1-207ENST00000559309 SERPINA5P05154 406 aa12.86□□□□□ -0.35
SNRPA1-207ENST00000559309 CCDC159P0C7I6 412 aa12.86□□□□□ -0.35
SNRPA1-207ENST00000559309 RPS27P42677 84 aaKnown RBP12.86□□□□□ -0.35
SNRPA1-207ENST00000559309 NUDT6P53370 316 aa12.86□□□□□ -0.35
SNRPA1-207ENST00000559309 UBE2NP61088 152 aaKnown RBP12.86□□□□□ -0.35
SNRPA1-207ENST00000559309 RPS7P62081 194 aaKnown RBP12.86□□□□□ -0.35
SNRPA1-207ENST00000559309 ROM1Q03395 351 aa12.86□□□□□ -0.35
SNRPA1-207ENST00000559309 SCRN3Q0VDG4 424 aa12.86□□□□□ -0.35
SNRPA1-207ENST00000559309 EGFL6Q8IUX8 553 aa12.86□□□□□ -0.35
SNRPA1-207ENST00000559309 ERI1Q8IV48 349 aaKnown RBP12.86□□□□□ -0.35
SNRPA1-207ENST00000559309 MUCL1Q96DR8 90 aa12.86□□□□□ -0.35
SNRPA1-207ENST00000559309 RNFT2Q96EX2 444 aa12.86□□□□□ -0.35
SNRPA1-207ENST00000559309 POM121L2Q96KW2 1035 aa12.86□□□□□ -0.35
SNRPA1-207ENST00000559309 TMEM204Q9BSN7 226 aa12.86□□□□□ -0.35
SNRPA1-207ENST00000559309 ABHD6Q9BV23 337 aa12.86□□□□□ -0.35
SNRPA1-207ENST00000559309 DUSP21Q9H596 190 aa12.86□□□□□ -0.35
SNRPA1-207ENST00000559309 SLC24A3Q9HC58 644 aa12.86□□□□□ -0.35
SNRPA1-207ENST00000559309 CNOT2Q9NZN8 540 aaKnown RBP12.86□□□□□ -0.35
SNRPA1-207ENST00000559309 PSORS1C1Q9UIG5 152 aa12.86□□□□□ -0.35
SNRPA1-207ENST00000559309 COPS3Q9UNS2 423 aa12.86□□□□□ -0.35
SNRPA1-207ENST00000559309 CACNA1DQ01668 2161 aa12.86□□□□□ -0.35
SNRPA1-207ENST00000559309 HRNRQ86YZ3 2850 aaPredicted RBP12.85□□□□□ -0.35
SNRPA1-207ENST00000559309 LOC100509620A0A075B734 347 aa12.85□□□□□ -0.35
SNRPA1-207ENST00000559309 DPRXA6NFQ7 191 aa12.85□□□□□ -0.35
SNRPA1-207ENST00000559309 PRSS44E7EML9 344 aa12.85□□□□□ -0.35
SNRPA1-207ENST00000559309 HLA-DQA2P01906 255 aa12.85□□□□□ -0.35
SNRPA1-207ENST00000559309 OR2T7P0C7T2 308 aa12.85□□□□□ -0.35
SNRPA1-207ENST00000559309 ZNF35P13682 527 aa12.85□□□□□ -0.35
SNRPA1-207ENST00000559309 ZNF823P16415 610 aa12.85□□□□□ -0.35
SNRPA1-207ENST00000559309 CSNK2BP67870 215 aa12.85□□□□□ -0.35
SNRPA1-207ENST00000559309 SNTB1Q13884 538 aaKnown RBP12.85□□□□□ -0.35
SNRPA1-207ENST00000559309 RAB35Q15286 201 aa12.85□□□□□ -0.35
SNRPA1-207ENST00000559309 PABPC1L2AQ5JQF8 200 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms