RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 TIGD4Q8IY51 512 aa5.76□□□□□ -1.49
CHRNA3-204ENST00000559002 ZNF786Q8N393 782 aa5.76□□□□□ -1.49
CHRNA3-204ENST00000559002 ZNF454Q8N9F8 522 aa5.76□□□□□ -1.49
CHRNA3-204ENST00000559002 WDR31Q8NA23 367 aa5.76□□□□□ -1.49
CHRNA3-204ENST00000559002 CLEC18CQ8NCF0 446 aa5.76□□□□□ -1.49
CHRNA3-204ENST00000559002 GJC3Q8NFK1 279 aa5.76□□□□□ -1.49
CHRNA3-204ENST00000559002 OR10H4Q8NGA5 316 aa5.76□□□□□ -1.49
CHRNA3-204ENST00000559002 OTOSQ8NHW6 89 aa5.76□□□□□ -1.49
CHRNA3-204ENST00000559002 LINC01560Q8TB33 94 aa5.76□□□□□ -1.49
CHRNA3-204ENST00000559002 LGALS12Q96DT0 336 aa5.76□□□□□ -1.49
CHRNA3-204ENST00000559002 FBXO17Q96EF6 278 aa5.76□□□□□ -1.49
CHRNA3-204ENST00000559002 WFIKKN1Q96NZ8 548 aa5.76□□□□□ -1.49
CHRNA3-204ENST00000559002 MNTQ99583 582 aa5.76□□□□□ -1.49
CHRNA3-204ENST00000559002 KCNS3Q9BQ31 491 aa5.76□□□□□ -1.49
CHRNA3-204ENST00000559002 C1QTNF6Q9BXI9 259 aa5.76□□□□□ -1.49
CHRNA3-204ENST00000559002 OR2H1Q9GZK4 316 aa5.76□□□□□ -1.49
CHRNA3-204ENST00000559002 YIPF3Q9GZM5 350 aa5.76□□□□□ -1.49
CHRNA3-204ENST00000559002 C1orf198Q9H425 327 aa5.76□□□□□ -1.49
CHRNA3-204ENST00000559002 MARCH7Q9H992 704 aa5.76□□□□□ -1.49
CHRNA3-204ENST00000559002 ADGRL4Q9HBW9 690 aa5.76□□□□□ -1.49
CHRNA3-204ENST00000559002 SLC24A3Q9HC58 644 aa5.76□□□□□ -1.49
CHRNA3-204ENST00000559002 SCN3BQ9NY72 215 aa5.76□□□□□ -1.49
CHRNA3-204ENST00000559002 PLEK2Q9NYT0 353 aa5.76□□□□□ -1.49
CHRNA3-204ENST00000559002 CYB5R1Q9UHQ9 305 aa5.76□□□□□ -1.49
CHRNA3-204ENST00000559002 LAMP5Q9UJQ1 280 aa5.76□□□□□ -1.49
CHRNA3-204ENST00000559002 GDF2Q9UK05 429 aaPredicted RBP5.76□□□□□ -1.49
CHRNA3-204ENST00000559002 BLOC1S6Q9UL45 172 aa5.76□□□□□ -1.49
CHRNA3-204ENST00000559002 PCDHGB5Q9Y5G0 923 aa5.76□□□□□ -1.49
CHRNA3-204ENST00000559002 PCDHGB1Q9Y5G3 927 aa5.76□□□□□ -1.49
CHRNA3-204ENST00000559002 SLC25A15Q9Y619 301 aa5.76□□□□□ -1.49
CHRNA3-204ENST00000559002 LHFPL6Q9Y693 200 aa5.76□□□□□ -1.49
CHRNA3-204ENST00000559002 TMEM14AQ9Y6G1 99 aa5.76□□□□□ -1.49
CHRNA3-204ENST00000559002 PTPN13Q12923 2485 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 ZNF503-AS2A6NEH8 195 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 C19orf84I3L1E1 186 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 SLC1A7O00341 560 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 PHYHO14832 338 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 RER1O15258 196 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 XPNPEP2O43895 674 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 THBDP07204 575 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 MMP7P09237 267 aaPredicted RBP5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 OR2T7P0C7T2 308 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 CBR1P16152 277 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 APLNRP35414 380 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 HTR5AP47898 357 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 CXCR4P61073 352 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 ACTC1P68032 377 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 ACTA1P68133 377 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 PSG4Q00888 419 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 RAB39AQ14964 217 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 PCK2Q16822 640 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 PABPC1L2AQ5JQF8 200 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 ELFN2Q5R3F8 820 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 C6orf141Q5SZD1 244 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 LAIR2Q6ISS4 152 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 ZNF774Q6NX45 483 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 KCTD18Q6PI47 426 aaPredicted RBP5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 CORO6Q6QEF8 472 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 AHSA2Q719I0 299 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 SPATC1Q76KD6 591 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 CDC20BQ86Y33 519 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 STX19Q8N4C7 294 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 FAM169BQ8N8A8 192 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 ZNF540Q8NDQ6 660 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 OR4F15Q8NGB8 312 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 OR2T27Q8NH04 317 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 AKR7LQ8NHP1 331 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 FGFBP3Q8TAT2 258 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 FAM222BQ8WU58 562 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 FBLIM1Q8WUP2 373 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 THEM6Q8WUY1 208 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 ASB17Q8WXJ9 295 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 SLAMF6Q96DU3 332 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 MRPL48Q96GC5 212 aaKnown RBP5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 DACH2Q96NX9 599 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 MYCBPQ99417 103 aaPredicted RBP5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 TBX5Q99593 518 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 COPS4Q9BT78 406 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 TTTY10Q9BZA0 68 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 HDHD2Q9H0R4 259 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 WNT5BQ9H1J7 359 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 ESRP2Q9H6T0 727 aaKnown RBP5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 CDH20Q9HBT6 801 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 NOX3Q9HBY0 568 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 CENPMQ9NSP4 180 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 CHCHD3Q9NX63 227 aaKnown RBP5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 B3GNT2Q9NY97 397 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 ZNF224Q9NZL3 707 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 CNOT2Q9NZN8 540 aaKnown RBP5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 CRIM1Q9NZV1 1036 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 IKZF2Q9UKS7 526 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 LRCH1Q9Y2L9 728 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 TPRKBQ9Y3C4 175 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 CACNA1CQ13936 2221 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 HECTD1Q9ULT8 2610 aa5.75□□□□□ -1.49
CHRNA3-204ENST00000559002 IGHV1-18A0A0C4DH31 117 aa5.74□□□□□ -1.49
CHRNA3-204ENST00000559002 DAPL1A0PJW8 107 aa5.74□□□□□ -1.49
CHRNA3-204ENST00000559002 OR6C6A6NF89 314 aa5.74□□□□□ -1.49
CHRNA3-204ENST00000559002 ZNF878C9JN71 531 aa5.74□□□□□ -1.49
CHRNA3-204ENST00000559002 PTGES3LE9PB15 166 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms