RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 ENTPD5O75356 428 aa5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 PTP4A3O75365 173 aa5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 NDUFB2O95178 105 aa5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 GADD45GO95257 159 aa5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 FARS2O95363 451 aaKnown RBP5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 LY6G6DO95868 133 aa5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 FABP3P05413 133 aa5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 CD14P08571 375 aa5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 IGFBP1P08833 259 aaPredicted RBP5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 MMP7P09237 267 aaPredicted RBP5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 ITGA2P17301 1181 aa5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 CALB2P22676 271 aa5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 NR4A1P22736 598 aa5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 SERPINF1P36955 418 aa5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 MAGEA2P43356 314 aa5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 NUDT6P53370 316 aa5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 RIPPLY3P57055 190 aa5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 SNRPD2P62316 118 aaKnown RBP5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 MS4A2Q01362 244 aa5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 CHRNB3Q05901 458 aa5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 KRTAP1-1Q07627 177 aa5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 RAB35Q15286 201 aa5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 LCN8Q6JVE9 175 aa5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 CLEC9AQ6UXN8 241 aa5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 FOXL2NBQ6ZUU3 175 aa5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 Q71RC1 249 aaPredicted RBP5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 SLC16A14Q7RTX9 510 aa5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 ZER1Q7Z7L7 766 aa5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 ZDHHC21Q8IVQ6 265 aa5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 CDK20Q8IZL9 346 aa5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 LRRC18Q8N456 261 aa5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 PAQR4Q8N4S7 273 aaPredicted RBP5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 ZNF525Q8N782 197 aa5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 MAPK1IP1LQ8NDC0 245 aa5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 IL17RDQ8NFM7 739 aa5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 NSMAFQ92636 917 aa5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 RASD2Q96D21 266 aa5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 RAX2Q96IS3 184 aa5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 Q96M85 177 aa5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 GPX7Q96SL4 187 aaPredicted RBP5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 PLK3Q9H4B4 646 aa5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 SIAEQ9HAT2 523 aa5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 IL1RAPQ9NPH3 570 aa5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 NRIP3Q9NQ35 241 aa5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 TAS2R1Q9NYW7 299 aa5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 IL20RAQ9UHF4 553 aa5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 FBXL3Q9UKT7 428 aa5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 PMF1-BGLAPU3KQ54 211 aa5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 YLPM1P49750 1951 aaKnown RBP5.18□□□□□ -1.58
CTDSPL2-204ENST00000558966 TEX13CA0A0J9YWL9 993 aa5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 SLC22A23A1A5C7 686 aa5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 UNC119BA6NIH7 251 aa5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 A6NIZ1 184 aa5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 IMPA2O14732 288 aa5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 MGRN1O60291 552 aa5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 HEXAP06865 529 aa5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 NR2C1P13056 603 aa5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 CCL2P13500 99 aa5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 ZNF32P17041 273 aa5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 NPR2P20594 1047 aa5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 RRM2P31350 389 aa5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 RPL4P36578 427 aaKnown RBP5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 PPOXP50336 477 aa5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 EFNA4P52798 201 aa5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 SMIM11AP58511 58 aa5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 RAP1BP61224 184 aa5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 RAP1AP62834 184 aa5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 KRR1Q13601 381 aaKnown RBP5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 SLC36A2Q495M3 483 aa5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 MTX3Q5HYI7 312 aa5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 PABPC1L2AQ5JQF8 200 aa5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 THEM4Q5T1C6 240 aa5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 TMEM53Q6P2H8 277 aa5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 DPPA2Q7Z7J5 298 aa5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 ARHGAP24Q8N264 748 aa5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 SVOPLQ8N434 492 aa5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 DTX3Q8N9I9 347 aa5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 CPEB3Q8NE35 698 aaKnown RBP5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 SLC30A7Q8NEW0 376 aa5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 OR10H5Q8NGA6 315 aa5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 FNDC8Q8TC99 324 aa5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 BCAS4Q8TDM0 211 aa5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 MCUR1Q96AQ8 359 aa5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 CLPTM1LQ96KA5 538 aa5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 ZNF570Q96NI8 536 aa5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 RBP7Q96R05 134 aa5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 DOK1Q99704 481 aa5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 REG4Q9BYZ8 158 aa5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 MRPL37Q9BZE1 423 aaKnown RBP5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 RNF121Q9H920 327 aa5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 PRPF19Q9UMS4 504 aaKnown RBP5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 AURKCQ9UQB9 309 aa5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.17□□□□□ -1.589e-9■■■■■ 32.9
CTDSPL2-204ENST00000558966 A0A1W2PPL8 197 aa5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 PRSS37A4D1T9 235 aa5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 FAM171A2A8MVW0 826 aa5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 OR10H3O60404 316 aa5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 SNAP29O95721 258 aa5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 TXNDC12O95881 172 aa5.17□□□□□ -1.58
CTDSPL2-204ENST00000558966 CTLA4P16410 223 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms