RNA–Protein interactions for RNA: ENST00000558925.1

USP3-209, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-209ENST00000558925 DNAJC3Q13217 504 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 MAB21L1Q13394 359 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 ZNF266Q14584 549 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 RAB11BQ15907 218 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 PSMD5Q16401 504 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 POU2AF1Q16633 256 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 FAM83EQ2M2I3 478 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 RPEL1Q2QD12 228 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 TRMT5Q32P41 509 aaKnown RBP1.08□□□□□ -2.24
USP3-209ENST00000558925 XKR4Q5GH76 650 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 COA6Q5JTJ3 125 aaKnown RBP1.08□□□□□ -2.24
USP3-209ENST00000558925 CCNJQ5T5M9 372 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 RSBN1Q5VWQ0 802 aaPredicted RBP1.08□□□□□ -2.24
USP3-209ENST00000558925 CYB5R2Q6BCY4 276 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 ZNF530Q6P9A1 599 aaPredicted RBP1.08□□□□□ -2.24
USP3-209ENST00000558925 PLET1Q6UQ28 207 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 FBXW12Q6X9E4 464 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 TMEM179Q6ZVK1 233 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 TMEM150AQ86TG1 271 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 OAFQ86UD1 273 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 ZNF429Q86V71 674 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 ZNF547Q8IVP9 402 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 CMTM8Q8IZV2 173 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 SLC34A3Q8N130 599 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 ARIH2OSQ8N7S6 290 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 C8orf31Q8N9H6 132 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 FAM184AQ8NB25 1140 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 OR51G1Q8NGK1 321 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 OR4A15Q8NGL6 344 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 OR5AR1Q8NGP9 310 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 OR2A1Q8NGT9 310 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 OR10J6PQ8NGY7 276 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 OR51F2Q8NH61 342 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 OR51E1Q8TCB6 317 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 ZNF75CPQ92670 426 aaPredicted RBP1.08□□□□□ -2.24
USP3-209ENST00000558925 APH1AQ96BI3 265 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 ASB9Q96DX5 294 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 CERS2Q96G23 380 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 ZNF799Q96GE5 643 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 SLC35E1Q96K37 410 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 TSSK3Q96PN8 268 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 GSDMAQ96QA5 445 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 TAAR1Q96RJ0 339 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 MICU1Q9BPX6 476 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 ECSITQ9BQ95 431 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 UQCC2Q9BRT2 126 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 PLA2G2FQ9BZM2 168 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 NAA50Q9GZZ1 169 aaKnown RBP1.08□□□□□ -2.24
USP3-209ENST00000558925 IQCGQ9H095 443 aaKnown RBP1.08□□□□□ -2.24
USP3-209ENST00000558925 BLZF1Q9H2G9 400 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 PIGUQ9H490 435 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 FBXO44Q9H4M3 255 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 RGCCQ9H4X1 137 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 NTN4Q9HB63 628 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 WFDC1Q9HC57 220 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 MTFP1Q9UDX5 166 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 ZNF629Q9UEG4 869 aaPredicted RBP1.08□□□□□ -2.24
USP3-209ENST00000558925 YARS2Q9Y2Z4 477 aaKnown RBP1.08□□□□□ -2.24
USP3-209ENST00000558925 CHTOPQ9Y3Y2 248 aaKnown RBP1.08□□□□□ -2.24
USP3-209ENST00000558925 CACNG2Q9Y698 323 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 WDR62O43379 1518 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 MROH7-TTC4A0A0A0MT08 1334 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 MROH7Q68CQ1 1323 aa1.08□□□□□ -2.24
USP3-209ENST00000558925 AKNAQ7Z591 1439 aa1.07□□□□□ -2.24
USP3-209ENST00000558925 CDC42BPBQ9Y5S2 1711 aa1.07□□□□□ -2.24
USP3-209ENST00000558925 TRBV6-6A0A0A6YYG2 114 aa1.07□□□□□ -2.24
USP3-209ENST00000558925 TRAV39A0A0B4J263 110 aa1.07□□□□□ -2.24
USP3-209ENST00000558925 WI2-2373I1.2A0A1W2PRP0 233 aa1.07□□□□□ -2.24
USP3-209ENST00000558925 LYRM9A8MSI8 78 aa1.07□□□□□ -2.24
USP3-209ENST00000558925 LAD1O00515 517 aa1.07□□□□□ -2.24
USP3-209ENST00000558925 XKRYO14609 159 aa1.07□□□□□ -2.24
USP3-209ENST00000558925 NVLO15381 856 aaKnown RBP1.07□□□□□ -2.24
USP3-209ENST00000558925 NMT2O60551 498 aa1.07□□□□□ -2.24
USP3-209ENST00000558925 AQP8O94778 261 aa1.07□□□□□ -2.24
USP3-209ENST00000558925 GABARAPO95166 117 aa1.07□□□□□ -2.24
USP3-209ENST00000558925 TDP2O95551 362 aa1.07□□□□□ -2.24
USP3-209ENST00000558925 LSM8O95777 96 aaKnown RBP1.07□□□□□ -2.24
USP3-209ENST00000558925 TGM6O95932 706 aa1.07□□□□□ -2.24
USP3-209ENST00000558925 CSTAP01040 98 aa1.07□□□□□ -2.24
USP3-209ENST00000558925 HLA-HP01893 362 aa1.07□□□□□ -2.24
USP3-209ENST00000558925 HBE1P02100 147 aa1.07□□□□□ -2.24
USP3-209ENST00000558925 PGA4P0DJD7 388 aa1.07□□□□□ -2.24
USP3-209ENST00000558925 PGA3P0DJD8 388 aa1.07□□□□□ -2.24
USP3-209ENST00000558925 CT45A6P0DMU7 189 aa1.07□□□□□ -2.24
USP3-209ENST00000558925 CT45A5P0DMU8 189 aa1.07□□□□□ -2.24
USP3-209ENST00000558925 CT45A7P0DMV0 189 aa1.07□□□□□ -2.24
USP3-209ENST00000558925 PSG2P11465 335 aa1.07□□□□□ -2.24
USP3-209ENST00000558925 NR2C1P13056 603 aa1.07□□□□□ -2.24
USP3-209ENST00000558925 ZNF823P16415 610 aa1.07□□□□□ -2.24
USP3-209ENST00000558925 RAB4AP20338 218 aa1.07□□□□□ -2.24
USP3-209ENST00000558925 CPN2P22792 545 aa1.07□□□□□ -2.24
USP3-209ENST00000558925 GABRR2P28476 465 aa1.07□□□□□ -2.24
USP3-209ENST00000558925 HOXA9P31269 272 aa1.07□□□□□ -2.24
USP3-209ENST00000558925 CFHR2P36980 270 aa1.07□□□□□ -2.24
USP3-209ENST00000558925 CEACAM6P40199 344 aa1.07□□□□□ -2.24
USP3-209ENST00000558925 CDKN2BP42772 138 aa1.07□□□□□ -2.24
USP3-209ENST00000558925 KIR3DL2P43630 455 aa1.07□□□□□ -2.24
USP3-209ENST00000558925 ZNF133P52736 654 aaPredicted RBP1.07□□□□□ -2.24
USP3-209ENST00000558925 WNT4P56705 351 aa1.07□□□□□ -2.24
USP3-209ENST00000558925 DAOAP59103 153 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms