RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 CDH10Q9Y6N8 788 aa13.82□□□□□ -0.2
CDC42BPB-203ENST00000558867 A0A087WUJ7 227 aa13.81□□□□□ -0.2
CDC42BPB-203ENST00000558867 ZC3H12DA2A288 527 aaKnown RBP13.81□□□□□ -0.2
CDC42BPB-203ENST00000558867 TMEM89A2RUT3 159 aa13.81□□□□□ -0.2
CDC42BPB-203ENST00000558867 A8MVM7 634 aa13.81□□□□□ -0.2
CDC42BPB-203ENST00000558867 TFP02787 698 aa13.81□□□□□ -0.2
CDC42BPB-203ENST00000558867 ADRA2AP08913 450 aa13.81□□□□□ -0.2
CDC42BPB-203ENST00000558867 PNMTP11086 282 aa13.81□□□□□ -0.2
CDC42BPB-203ENST00000558867 PIPP12273 146 aaPredicted RBP13.81□□□□□ -0.2
CDC42BPB-203ENST00000558867 CALCRP30988 508 aa13.81□□□□□ -0.2
CDC42BPB-203ENST00000558867 FMO3P31513 532 aa13.81□□□□□ -0.2
CDC42BPB-203ENST00000558867 GPR6P46095 362 aaPredicted RBP13.81□□□□□ -0.2
CDC42BPB-203ENST00000558867 EVX1P49640 407 aa13.81□□□□□ -0.2
CDC42BPB-203ENST00000558867 SELENOPP49908 381 aa13.81□□□□□ -0.2
CDC42BPB-203ENST00000558867 POU3F1Q03052 451 aaPredicted RBP13.81□□□□□ -0.2
CDC42BPB-203ENST00000558867 ALG10BQ5I7T1 473 aa13.81□□□□□ -0.2
CDC42BPB-203ENST00000558867 MEDAGQ5VYS4 303 aa13.81□□□□□ -0.2
CDC42BPB-203ENST00000558867 XAF1Q6GPH4 301 aa13.81□□□□□ -0.2
CDC42BPB-203ENST00000558867 WBP2NLQ6ICG8 309 aa13.81□□□□□ -0.2
CDC42BPB-203ENST00000558867 USP43Q70EL4 1123 aa13.81□□□□□ -0.2
CDC42BPB-203ENST00000558867 ALDH16A1Q8IZ83 802 aa13.81□□□□□ -0.2
CDC42BPB-203ENST00000558867 CDK20Q8IZL9 346 aa13.81□□□□□ -0.2
CDC42BPB-203ENST00000558867 SVOPQ8N4V2 548 aa13.81□□□□□ -0.2
CDC42BPB-203ENST00000558867 TMEM43Q9BTV4 400 aa13.81□□□□□ -0.2
CDC42BPB-203ENST00000558867 PAK1IP1Q9NWT1 392 aaPredicted RBP13.81□□□□□ -0.2
CDC42BPB-203ENST00000558867 CLN6Q9NWW5 311 aa13.81□□□□□ -0.2
CDC42BPB-203ENST00000558867 SELENONQ9NZV5 590 aa13.81□□□□□ -0.2
CDC42BPB-203ENST00000558867 RPS6KB2Q9UBS0 482 aa13.81□□□□□ -0.2
CDC42BPB-203ENST00000558867 SNX5Q9Y5X3 404 aa13.81□□□□□ -0.2
CDC42BPB-203ENST00000558867 RGS10O43665 173 aa13.8□□□□□ -0.2
CDC42BPB-203ENST00000558867 XPNPEP2O43895 674 aa13.8□□□□□ -0.2
CDC42BPB-203ENST00000558867 FAM20BO75063 409 aa13.8□□□□□ -0.2
CDC42BPB-203ENST00000558867 SOX14O95416 240 aa13.8□□□□□ -0.2
CDC42BPB-203ENST00000558867 EGR1P18146 543 aa13.8□□□□□ -0.2
CDC42BPB-203ENST00000558867 POU1F1P28069 291 aa13.8□□□□□ -0.2
CDC42BPB-203ENST00000558867 GTF2E2P29084 291 aaKnown RBP13.8□□□□□ -0.2
CDC42BPB-203ENST00000558867 SLC15A1P46059 708 aa13.8□□□□□ -0.2
CDC42BPB-203ENST00000558867 CAPZA2P47755 286 aa13.8□□□□□ -0.2
CDC42BPB-203ENST00000558867 TUBA1BP68363 451 aa13.8□□□□□ -0.2
CDC42BPB-203ENST00000558867 ROR2Q01974 943 aaKnown RBP13.8□□□□□ -0.2
CDC42BPB-203ENST00000558867 HGFACQ04756 655 aa13.8□□□□□ -0.2
CDC42BPB-203ENST00000558867 GINS1Q14691 196 aa13.8□□□□□ -0.2
CDC42BPB-203ENST00000558867 PTCHD4Q6ZW05 846 aa13.8□□□□□ -0.2
CDC42BPB-203ENST00000558867 KCTD8Q6ZWB6 473 aa13.8□□□□□ -0.2
CDC42BPB-203ENST00000558867 TUBA1AQ71U36 451 aa13.8□□□□□ -0.2
CDC42BPB-203ENST00000558867 ZCCHC24Q8N2G6 241 aaKnown RBP13.8□□□□□ -0.2
CDC42BPB-203ENST00000558867 OR51F2Q8NH61 342 aa13.8□□□□□ -0.2
CDC42BPB-203ENST00000558867 LIPHQ8WWY8 451 aa13.8□□□□□ -0.2
CDC42BPB-203ENST00000558867 MYDGFQ969H8 173 aa13.8□□□□□ -0.2
CDC42BPB-203ENST00000558867 UBE2FQ969M7 185 aa13.8□□□□□ -0.2
CDC42BPB-203ENST00000558867 BPIFA2Q96DR5 249 aa13.8□□□□□ -0.2
CDC42BPB-203ENST00000558867 TEX12Q9BXU0 123 aa13.8□□□□□ -0.2
CDC42BPB-203ENST00000558867 NOX1Q9Y5S8 564 aa13.8□□□□□ -0.2
CDC42BPB-203ENST00000558867 IGHV2OR16-5A0A0B4J2B6 119 aa13.79□□□□□ -0.2
CDC42BPB-203ENST00000558867 EFCAB10A6NFE3 127 aa13.79□□□□□ -0.2
CDC42BPB-203ENST00000558867 UNC119BA6NIH7 251 aa13.79□□□□□ -0.2
CDC42BPB-203ENST00000558867 M0R233 179 aa13.79□□□□□ -0.2
CDC42BPB-203ENST00000558867 SYNGR3O43761 229 aa13.79□□□□□ -0.2
CDC42BPB-203ENST00000558867 PIP5K1CO60331 668 aa13.79□□□□□ -0.2
CDC42BPB-203ENST00000558867 SLC43A1O75387 559 aa13.79□□□□□ -0.2
CDC42BPB-203ENST00000558867 MSMBP08118 114 aa13.79□□□□□ -0.2
CDC42BPB-203ENST00000558867 SAGP10523 405 aaPredicted RBP13.79□□□□□ -0.2
CDC42BPB-203ENST00000558867 IFI30P13284 250 aa13.79□□□□□ -0.2
CDC42BPB-203ENST00000558867 ZNF43P17038 809 aa13.79□□□□□ -0.2
CDC42BPB-203ENST00000558867 ACHEP22303 614 aa13.79□□□□□ -0.2
CDC42BPB-203ENST00000558867 SLC9A3P48764 834 aa13.79□□□□□ -0.2
CDC42BPB-203ENST00000558867 TMEM33P57088 247 aa13.79□□□□□ -0.2
CDC42BPB-203ENST00000558867 SNTB2Q13425 540 aaKnown RBP13.79□□□□□ -0.2
CDC42BPB-203ENST00000558867 TMEM236Q5W0B7 351 aa13.79□□□□□ -0.2
CDC42BPB-203ENST00000558867 GPR141Q7Z602 305 aa13.79□□□□□ -0.2
CDC42BPB-203ENST00000558867 PEG10Q86TG7 708 aaKnown RBP13.79□□□□□ -0.2
CDC42BPB-203ENST00000558867 GPR137CQ8N3F9 429 aa13.79□□□□□ -0.2
CDC42BPB-203ENST00000558867 OR8D4Q8NGM9 314 aa13.79□□□□□ -0.2
CDC42BPB-203ENST00000558867 OR13F1Q8NGS4 319 aa13.79□□□□□ -0.2
CDC42BPB-203ENST00000558867 ZNF420Q8TAQ5 688 aaPredicted RBP13.79□□□□□ -0.2
CDC42BPB-203ENST00000558867 MUL1Q969V5 352 aa13.79□□□□□ -0.2
CDC42BPB-203ENST00000558867 TPK1Q9H3S4 243 aa13.79□□□□□ -0.2
CDC42BPB-203ENST00000558867 CRLF2Q9HC73 371 aa13.79□□□□□ -0.2
CDC42BPB-203ENST00000558867 MEPEQ9NQ76 525 aaPredicted RBP13.79□□□□□ -0.2
CDC42BPB-203ENST00000558867 TRAV20A0A0B4J274 112 aa13.78□□□□□ -0.2
CDC42BPB-203ENST00000558867 TMEM129A0AVI4 362 aa13.78□□□□□ -0.2
CDC42BPB-203ENST00000558867 RPL36A-HNRNPH2H7BZ11 118 aa13.78□□□□□ -0.2
CDC42BPB-203ENST00000558867 CDC42EP2O14613 210 aa13.78□□□□□ -0.2
CDC42BPB-203ENST00000558867 AKAP8O43823 692 aaKnown RBP13.78□□□□□ -0.2
CDC42BPB-203ENST00000558867 UPK3AO75631 287 aa13.78□□□□□ -0.2
CDC42BPB-203ENST00000558867 SEC14L2O76054 403 aa13.78□□□□□ -0.2
CDC42BPB-203ENST00000558867 HMGN1P05114 100 aa13.78□□□□□ -0.2
CDC42BPB-203ENST00000558867 IGFBP1P08833 259 aaPredicted RBP13.78□□□□□ -0.2
CDC42BPB-203ENST00000558867 MAKP20794 623 aa13.78□□□□□ -0.2
CDC42BPB-203ENST00000558867 GRK5P34947 590 aa13.78□□□□□ -0.2
CDC42BPB-203ENST00000558867 HILS1P60008 231 aa13.78□□□□□ -0.2
CDC42BPB-203ENST00000558867 ARF1P84077 181 aaKnown RBP13.78□□□□□ -0.2
CDC42BPB-203ENST00000558867 TBCEQ15813 527 aaPredicted RBP13.78□□□□□ -0.2
CDC42BPB-203ENST00000558867 SMN1Q16637 294 aaKnown RBP13.78□□□□□ -0.2
CDC42BPB-203ENST00000558867 ANKDD1AQ495B1 522 aa13.78□□□□□ -0.2
CDC42BPB-203ENST00000558867 C1orf140Q5VVS0 124 aa13.78□□□□□ -0.2
CDC42BPB-203ENST00000558867 RNLSQ5VYX0 342 aa13.78□□□□□ -0.2
CDC42BPB-203ENST00000558867 ACSM5Q6NUN0 579 aa13.78□□□□□ -0.2
CDC42BPB-203ENST00000558867 FAHD2BQ6P2I3 314 aaPredicted RBP13.78□□□□□ -0.2
CDC42BPB-203ENST00000558867 CADM2Q8N3J6 435 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms